RNA–Protein interactions for RNA: ENST00000518528.1

PVT1-207, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 624 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-207ENST00000518528 PEX26Q7Z412 305 aa8.18□□□□□ -1.1
PVT1-207ENST00000518528 CLNKQ7Z7G1 428 aa8.18□□□□□ -1.1
PVT1-207ENST00000518528 LUZP2Q86TE4 346 aa8.18□□□□□ -1.1
PVT1-207ENST00000518528 CAND1Q86VP6 1230 aaKnown RBP8.18□□□□□ -1.1
PVT1-207ENST00000518528 CPNE9Q8IYJ1 553 aa8.18□□□□□ -1.1
PVT1-207ENST00000518528 CCDC170Q8IYT3 715 aa8.18□□□□□ -1.1
PVT1-207ENST00000518528 MYO1HQ8N1T3 1032 aa8.18□□□□□ -1.1
PVT1-207ENST00000518528 MEIOBQ8N635 442 aa8.18□□□□□ -1.1
PVT1-207ENST00000518528 ZNF441Q8N8Z8 693 aa8.18□□□□□ -1.1
PVT1-207ENST00000518528 FAM13CQ8NE31 585 aa8.18□□□□□ -1.1
PVT1-207ENST00000518528 TTLQ8NG68 377 aa8.18□□□□□ -1.1
PVT1-207ENST00000518528 GIMAP7Q8NHV1 300 aa8.18□□□□□ -1.1
PVT1-207ENST00000518528 MBD3L2Q8NHZ7 208 aaPredicted RBP8.18□□□□□ -1.1
PVT1-207ENST00000518528 PAQR8Q8TEZ7 354 aa8.18□□□□□ -1.1
PVT1-207ENST00000518528 SLC5A11Q8WWX8 675 aa8.18□□□□□ -1.1
PVT1-207ENST00000518528 UCN3Q969E3 161 aa8.18□□□□□ -1.1
PVT1-207ENST00000518528 GAL3ST3Q96A11 431 aa8.18□□□□□ -1.1
PVT1-207ENST00000518528 SPACA9Q96E40 222 aaPredicted RBP8.18□□□□□ -1.1
PVT1-207ENST00000518528 ZNF597Q96LX8 424 aa8.18□□□□□ -1.1
PVT1-207ENST00000518528 GPR21Q99679 349 aa8.18□□□□□ -1.1
PVT1-207ENST00000518528 TM9SF2Q99805 663 aa8.18□□□□□ -1.1
PVT1-207ENST00000518528 DOHHQ9BU89 302 aa8.18□□□□□ -1.1
PVT1-207ENST00000518528 ALOXE3Q9BYJ1 711 aa8.18□□□□□ -1.1
PVT1-207ENST00000518528 PRDM14Q9GZV8 571 aa8.18□□□□□ -1.1
PVT1-207ENST00000518528 CXorf56Q9H5V9 222 aa8.18□□□□□ -1.1
PVT1-207ENST00000518528 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.18□□□□□ -1.1
PVT1-207ENST00000518528 TRMT1Q9NXH9 659 aaKnown RBP8.18□□□□□ -1.1
PVT1-207ENST00000518528 ARL15Q9NXU5 204 aa8.18□□□□□ -1.1
PVT1-207ENST00000518528 SOX13Q9UN79 622 aa8.18□□□□□ -1.1
PVT1-207ENST00000518528 DYRK1BQ9Y463 629 aa8.18□□□□□ -1.1
PVT1-207ENST00000518528 HRNRQ86YZ3 2850 aaPredicted RBP8.18□□□□□ -1.1
PVT1-207ENST00000518528 VPS13CQ709C8 3753 aa8.17□□□□□ -1.1
PVT1-207ENST00000518528 LRRC3CA6NJW4 275 aa8.17□□□□□ -1.1
PVT1-207ENST00000518528 CAPN14A8MX76 684 aa8.17□□□□□ -1.1
PVT1-207ENST00000518528 C17orf105B2RV13 164 aa8.17□□□□□ -1.1
PVT1-207ENST00000518528 CTIFO43310 598 aaKnown RBP8.17□□□□□ -1.1
PVT1-207ENST00000518528 TLX2O43763 284 aaPredicted RBP8.17□□□□□ -1.1
PVT1-207ENST00000518528 LIASO43766 372 aa8.17□□□□□ -1.1
PVT1-207ENST00000518528 H2AFYO75367 372 aaKnown RBP8.17□□□□□ -1.1
PVT1-207ENST00000518528 SMIM10L1P0DMW3 83 aa8.17□□□□□ -1.1
PVT1-207ENST00000518528 CYP4B1P13584 511 aa8.17□□□□□ -1.1
PVT1-207ENST00000518528 MGAT1P26572 445 aa8.17□□□□□ -1.1
PVT1-207ENST00000518528 MSH2P43246 934 aa8.17□□□□□ -1.1
PVT1-207ENST00000518528 AP1S2P56377 157 aa8.17□□□□□ -1.1
PVT1-207ENST00000518528 BASP1P80723 227 aaKnown RBP8.17□□□□□ -1.1
PVT1-207ENST00000518528 SARNPP82979 210 aaKnown RBP8.17□□□□□ -1.1
PVT1-207ENST00000518528 CDK16Q00536 496 aa8.17□□□□□ -1.1
PVT1-207ENST00000518528 REEP5Q00765 189 aa8.17□□□□□ -1.1
PVT1-207ENST00000518528 TGM3Q08188 693 aa8.17□□□□□ -1.1
PVT1-207ENST00000518528 GAB1Q13480 694 aa8.17□□□□□ -1.1
PVT1-207ENST00000518528 ZNF791Q3KP31 576 aaPredicted RBP8.17□□□□□ -1.1
PVT1-207ENST00000518528 PRAMEF20Q5VT98 475 aa8.17□□□□□ -1.1
PVT1-207ENST00000518528 CASC4Q6P4E1 433 aa8.17□□□□□ -1.1
PVT1-207ENST00000518528 MBOAT1Q6ZNC8 495 aa8.17□□□□□ -1.1
PVT1-207ENST00000518528 PLEKHM3Q6ZWE6 761 aa8.17□□□□□ -1.1
PVT1-207ENST00000518528 VSTM4Q8IW00 320 aa8.17□□□□□ -1.1
PVT1-207ENST00000518528 SYCE1Q8N0S2 351 aa8.17□□□□□ -1.1
PVT1-207ENST00000518528 FAM47BQ8NA70 645 aa8.17□□□□□ -1.1
PVT1-207ENST00000518528 OR56A3Q8NH54 315 aa8.17□□□□□ -1.1
PVT1-207ENST00000518528 NUBPLQ8TB37 319 aa8.17□□□□□ -1.1
PVT1-207ENST00000518528 SLC2A12Q8TD20 617 aa8.17□□□□□ -1.1
PVT1-207ENST00000518528 CD200R1Q8TD46 325 aa8.17□□□□□ -1.1
PVT1-207ENST00000518528 CALML6Q8TD86 181 aa8.17□□□□□ -1.1
PVT1-207ENST00000518528 PTPMT1Q8WUK0 201 aaPredicted RBP8.17□□□□□ -1.1
PVT1-207ENST00000518528 TMEM171Q8WVE6 324 aa8.17□□□□□ -1.1
PVT1-207ENST00000518528 ATG4AQ8WYN0 398 aa8.17□□□□□ -1.1
PVT1-207ENST00000518528 SMIM10Q96HG1 83 aa8.17□□□□□ -1.1
PVT1-207ENST00000518528 WDR83Q9BRX9 315 aaKnown RBP8.17□□□□□ -1.1
PVT1-207ENST00000518528 MED18Q9BUE0 208 aa8.17□□□□□ -1.1
PVT1-207ENST00000518528 AMBRA1Q9C0C7 1298 aa8.17□□□□□ -1.1
PVT1-207ENST00000518528 KLHL31Q9H511 634 aa8.17□□□□□ -1.1
PVT1-207ENST00000518528 COPS7BQ9H9Q2 264 aaPredicted RBP8.17□□□□□ -1.1
PVT1-207ENST00000518528 PELI2Q9HAT8 420 aa8.17□□□□□ -1.1
PVT1-207ENST00000518528 HOMER3Q9NSC5 361 aa8.17□□□□□ -1.1
PVT1-207ENST00000518528 SYBUQ9NX95 663 aa8.17□□□□□ -1.1
PVT1-207ENST00000518528 VTI1BQ9UEU0 232 aa8.17□□□□□ -1.1
PVT1-207ENST00000518528 TESMINQ9Y4I5 508 aa8.17□□□□□ -1.1
PVT1-207ENST00000518528 NPFFR2Q9Y5X5 522 aa8.17□□□□□ -1.1
PVT1-207ENST00000518528 MAGEB16A2A368 324 aa8.16□□□□□ -1.1
PVT1-207ENST00000518528 TP53I11O14683 189 aa8.16□□□□□ -1.1
PVT1-207ENST00000518528 ERI3O43414 337 aaKnown RBP8.16□□□□□ -1.1
PVT1-207ENST00000518528 C1QAP02745 245 aa8.16□□□□□ -1.1
PVT1-207ENST00000518528 GSTM2P28161 218 aa8.16□□□□□ -1.1
PVT1-207ENST00000518528 MC3RP41968 323 aa8.16□□□□□ -1.1
PVT1-207ENST00000518528 MASP1P48740 699 aa8.16□□□□□ -1.1
PVT1-207ENST00000518528 CDK9P50750 372 aaKnown RBP8.16□□□□□ -1.1
PVT1-207ENST00000518528 ATP5J2P56134 94 aa8.16□□□□□ -1.1
PVT1-207ENST00000518528 DHX9Q08211 1270 aaKnown RBP8.16□□□□□ -1.1
PVT1-207ENST00000518528 RUNX2Q13950 521 aa8.16□□□□□ -1.1
PVT1-207ENST00000518528 TOMM20Q15388 145 aa8.16□□□□□ -1.1
PVT1-207ENST00000518528 OASLQ15646 514 aaKnown RBP8.16□□□□□ -1.1
PVT1-207ENST00000518528 CHRFAM7AQ494W8 412 aa8.16□□□□□ -1.1
PVT1-207ENST00000518528 WIPI1Q5MNZ9 446 aaPredicted RBP8.16□□□□□ -1.1
PVT1-207ENST00000518528 VASNQ6EMK4 673 aa8.16□□□□□ -1.1
PVT1-207ENST00000518528 NXPE4Q6UWF7 544 aa8.16□□□□□ -1.1
PVT1-207ENST00000518528 PACS2Q86VP3 889 aa8.16□□□□□ -1.1
PVT1-207ENST00000518528 HIPK1Q86Z02 1210 aa8.16□□□□□ -1.1
PVT1-207ENST00000518528 LMNTD2Q8IXW0 634 aa8.16□□□□□ -1.1
PVT1-207ENST00000518528 KLHDC8AQ8IYD2 350 aa8.16□□□□□ -1.1
PVT1-207ENST00000518528 ZPLD1Q8TCW7 415 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms