RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 KRT39Q6A163 491 aa1.36□□□□□ -2.19
CCDC93-209ENST00000488908 CENPVQ7Z7K6 275 aaPredicted RBP1.36□□□□□ -2.19
CCDC93-209ENST00000488908 TC2NQ8N9U0 490 aa1.36□□□□□ -2.19
CCDC93-209ENST00000488908 POMGNT2Q8NAT1 580 aa1.36□□□□□ -2.19
CCDC93-209ENST00000488908 ZNF671Q8TAW3 534 aa1.36□□□□□ -2.19
CCDC93-209ENST00000488908 CD99L2Q8TCZ2 262 aa1.36□□□□□ -2.19
CCDC93-209ENST00000488908 CDHR1Q96JP9 859 aa1.36□□□□□ -2.19
CCDC93-209ENST00000488908 GCNAQ96QF7 691 aa1.36□□□□□ -2.19
CCDC93-209ENST00000488908 BARD1Q99728 777 aaKnown RBP1.36□□□□□ -2.19
CCDC93-209ENST00000488908 RSPO3Q9BXY4 272 aaPredicted RBP1.36□□□□□ -2.19
CCDC93-209ENST00000488908 GPR88Q9GZN0 384 aa1.36□□□□□ -2.19
CCDC93-209ENST00000488908 C10orf88Q9H8K7 445 aa1.36□□□□□ -2.19
CCDC93-209ENST00000488908 PDE7BQ9NP56 450 aa1.36□□□□□ -2.19
CCDC93-209ENST00000488908 SPG21Q9NZD8 308 aa1.36□□□□□ -2.19
CCDC93-209ENST00000488908 MORF4L1Q9UBU8 362 aa1.36□□□□□ -2.19
CCDC93-209ENST00000488908 ANAPC2Q9UJX6 822 aa1.36□□□□□ -2.19
CCDC93-209ENST00000488908 CCPG1Q9ULG6 757 aa1.36□□□□□ -2.19
CCDC93-209ENST00000488908 GPR34Q9UPC5 381 aa1.36□□□□□ -2.19
CCDC93-209ENST00000488908 PASKQ96RG2 1323 aa1.36□□□□□ -2.19
CCDC93-209ENST00000488908 OR5H15A6NDH6 313 aa1.35□□□□□ -2.19
CCDC93-209ENST00000488908 SERF1AO75920 110 aa1.35□□□□□ -2.19
CCDC93-209ENST00000488908 BEST1O76090 585 aa1.35□□□□□ -2.19
CCDC93-209ENST00000488908 FCGR3AP08637 254 aa1.35□□□□□ -2.19
CCDC93-209ENST00000488908 TOP1P11387 765 aaKnown RBP1.35□□□□□ -2.19
CCDC93-209ENST00000488908 FUT3P21217 361 aa1.35□□□□□ -2.19
CCDC93-209ENST00000488908 SLC1A3P43003 542 aa1.35□□□□□ -2.19
CCDC93-209ENST00000488908 MTCP1P56278 107 aa1.35□□□□□ -2.19
CCDC93-209ENST00000488908 CD47Q08722 323 aa1.35□□□□□ -2.19
CCDC93-209ENST00000488908 SNTB1Q13884 538 aaKnown RBP1.35□□□□□ -2.19
CCDC93-209ENST00000488908 IL11RAQ14626 422 aa1.35□□□□□ -2.19
CCDC93-209ENST00000488908 PRR4Q16378 134 aa1.35□□□□□ -2.19
CCDC93-209ENST00000488908 MICAQ29983 383 aa1.35□□□□□ -2.19
CCDC93-209ENST00000488908 HYIQ5T013 277 aa1.35□□□□□ -2.19
CCDC93-209ENST00000488908 ARMC4Q5T2S8 1044 aa1.35□□□□□ -2.19
CCDC93-209ENST00000488908 SPATA1Q5VX52 437 aa1.35□□□□□ -2.19
CCDC93-209ENST00000488908 MZT2BQ6NZ67 158 aa1.35□□□□□ -2.19
CCDC93-209ENST00000488908 SLC27A4Q6P1M0 643 aa1.35□□□□□ -2.19
CCDC93-209ENST00000488908 GPR141Q7Z602 305 aa1.35□□□□□ -2.19
CCDC93-209ENST00000488908 ELMOD1Q8N336 334 aa1.35□□□□□ -2.19
CCDC93-209ENST00000488908 SLC43A2Q8N370 569 aa1.35□□□□□ -2.19
CCDC93-209ENST00000488908 SMPDL3AQ92484 453 aa1.35□□□□□ -2.19
CCDC93-209ENST00000488908 LRRC3BQ96PB8 259 aa1.35□□□□□ -2.19
CCDC93-209ENST00000488908 APOL6Q9BWW8 343 aa1.35□□□□□ -2.19
CCDC93-209ENST00000488908 NACAP1Q9BZK3 213 aa1.35□□□□□ -2.19
CCDC93-209ENST00000488908 TIGARQ9NQ88 270 aa1.35□□□□□ -2.19
CCDC93-209ENST00000488908 PCDHGB4Q9UN71 923 aa1.35□□□□□ -2.19
CCDC93-209ENST00000488908 SH3GLB1Q9Y371 365 aa1.35□□□□□ -2.19
CCDC93-209ENST00000488908 FCGBPQ9Y6R7 5405 aaPredicted RBP1.34□□□□□ -2.19
CCDC93-209ENST00000488908 TRBC2A0A5B9 178 aa1.34□□□□□ -2.19
CCDC93-209ENST00000488908 SYNDIG1LA6NDD5 238 aa1.34□□□□□ -2.19
CCDC93-209ENST00000488908 A8MX80 341 aa1.34□□□□□ -2.19
CCDC93-209ENST00000488908 TMEM150CB9EJG8 249 aa1.34□□□□□ -2.19
CCDC93-209ENST00000488908 FOSL2P15408 326 aa1.34□□□□□ -2.19
CCDC93-209ENST00000488908 ZNF823P16415 610 aa1.34□□□□□ -2.19
CCDC93-209ENST00000488908 PAX3P23760 479 aa1.34□□□□□ -2.19
CCDC93-209ENST00000488908 ALCAMQ13740 583 aa1.34□□□□□ -2.19
CCDC93-209ENST00000488908 LETM2Q2VYF4 491 aa1.34□□□□□ -2.19
CCDC93-209ENST00000488908 CCDC14Q49A88 953 aa1.34□□□□□ -2.19
CCDC93-209ENST00000488908 C9orf152Q5JTZ5 239 aa1.34□□□□□ -2.19
CCDC93-209ENST00000488908 LRRC31Q6UY01 552 aa1.34□□□□□ -2.19
CCDC93-209ENST00000488908 BRINP3Q76B58 766 aa1.34□□□□□ -2.19
CCDC93-209ENST00000488908 ZNF786Q8N393 782 aa1.34□□□□□ -2.19
CCDC93-209ENST00000488908 Q8N9G6 341 aaPredicted RBP1.34□□□□□ -2.19
CCDC93-209ENST00000488908 C8orf46Q8TAG6 207 aa1.34□□□□□ -2.19
CCDC93-209ENST00000488908 SPATA33Q96N06 139 aa1.34□□□□□ -2.19
CCDC93-209ENST00000488908 ABHD1Q96SE0 405 aa1.34□□□□□ -2.19
CCDC93-209ENST00000488908 KLHL4Q9C0H6 718 aa1.34□□□□□ -2.19
CCDC93-209ENST00000488908 ELL3Q9HB65 397 aaPredicted RBP1.34□□□□□ -2.19
CCDC93-209ENST00000488908 NECAP2Q9NVZ3 263 aa1.34□□□□□ -2.19
CCDC93-209ENST00000488908 APOBEC3BQ9UH17 382 aaKnown RBP1.34□□□□□ -2.19
CCDC93-209ENST00000488908 IGHV3OR16-12A0A075B7B8 117 aa1.33□□□□□ -2.2
CCDC93-209ENST00000488908 SLC15A5A6NIM6 579 aa1.33□□□□□ -2.2
CCDC93-209ENST00000488908 RNF212BA8MTL3 300 aa1.33□□□□□ -2.2
CCDC93-209ENST00000488908 NPIPA3F8WFD2 350 aa1.33□□□□□ -2.2
CCDC93-209ENST00000488908 ADAM20O43506 726 aa1.33□□□□□ -2.2
CCDC93-209ENST00000488908 LUC7L3O95232 432 aaKnown RBP1.33□□□□□ -2.2
CCDC93-209ENST00000488908 NR2F1P10589 423 aa1.33□□□□□ -2.2
CCDC93-209ENST00000488908 LAMP1P11279 417 aa1.33□□□□□ -2.2
CCDC93-209ENST00000488908 EEF2P13639 858 aaKnown RBP1.33□□□□□ -2.2
CCDC93-209ENST00000488908 SSTR1P30872 391 aa1.33□□□□□ -2.2
CCDC93-209ENST00000488908 ACTN2P35609 894 aa1.33□□□□□ -2.2
CCDC93-209ENST00000488908 CAPZA2P47755 286 aa1.33□□□□□ -2.2
CCDC93-209ENST00000488908 RAB28P51157 221 aa1.33□□□□□ -2.2
CCDC93-209ENST00000488908 SLC12A3P55017 1021 aa1.33□□□□□ -2.2
CCDC93-209ENST00000488908 ACSM1Q08AH1 577 aa1.33□□□□□ -2.2
CCDC93-209ENST00000488908 SLC10A1Q14973 349 aa1.33□□□□□ -2.2
CCDC93-209ENST00000488908 KYAT1Q16773 422 aa1.33□□□□□ -2.2
CCDC93-209ENST00000488908 ANKRD55Q3KP44 614 aa1.33□□□□□ -2.2
CCDC93-209ENST00000488908 GPR139Q6DWJ6 353 aa1.33□□□□□ -2.2
CCDC93-209ENST00000488908 MOXD1Q6UVY6 613 aa1.33□□□□□ -2.2
CCDC93-209ENST00000488908 ENPP7Q6UWV6 458 aa1.33□□□□□ -2.2
CCDC93-209ENST00000488908 C17orf107Q6ZR85 190 aa1.33□□□□□ -2.2
CCDC93-209ENST00000488908 CROCCP3Q8IVE0 287 aa1.33□□□□□ -2.2
CCDC93-209ENST00000488908 ZNF547Q8IVP9 402 aa1.33□□□□□ -2.2
CCDC93-209ENST00000488908 POGLUT1Q8NBL1 392 aa1.33□□□□□ -2.2
CCDC93-209ENST00000488908 ZNF397Q8NF99 534 aaPredicted RBP1.33□□□□□ -2.2
CCDC93-209ENST00000488908 TTYH2Q9BSA4 534 aa1.33□□□□□ -2.2
CCDC93-209ENST00000488908 CHMP4AQ9BY43 222 aa1.33□□□□□ -2.2
CCDC93-209ENST00000488908 ZNF702PQ9H963 129 aa1.33□□□□□ -2.2
CCDC93-209ENST00000488908 NANOGQ9H9S0 305 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms