RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 SHBGP04278 402 aa12.02□□□□□ -0.49
HDAC1-209ENST00000484305 PYGBP11216 843 aa12.02□□□□□ -0.49
HDAC1-209ENST00000484305 MST1P26927 711 aa12.02□□□□□ -0.49
HDAC1-209ENST00000484305 ARFIP1P53367 373 aa12.02□□□□□ -0.49
HDAC1-209ENST00000484305 FRG2Q64ET8 278 aa12.02□□□□□ -0.49
HDAC1-209ENST00000484305 C18orf63Q68DL7 685 aa12.02□□□□□ -0.49
HDAC1-209ENST00000484305 TTC19Q6DKK2 380 aaPredicted RBP12.02□□□□□ -0.49
HDAC1-209ENST00000484305 MILR1Q7Z6M3 343 aa12.02□□□□□ -0.49
HDAC1-209ENST00000484305 GPR180Q86V85 440 aa12.02□□□□□ -0.49
HDAC1-209ENST00000484305 ZNF227Q86WZ6 799 aa12.02□□□□□ -0.49
HDAC1-209ENST00000484305 TMEM132CQ8N3T6 1108 aa12.02□□□□□ -0.49
HDAC1-209ENST00000484305 ZNF321PQ8N8H1 164 aa12.02□□□□□ -0.49
HDAC1-209ENST00000484305 DNAJB8Q8NHS0 232 aa12.02□□□□□ -0.49
HDAC1-209ENST00000484305 SSC4DQ8WTU2 575 aa12.02□□□□□ -0.49
HDAC1-209ENST00000484305 SREK1Q8WXA9 508 aaKnown RBP12.02□□□□□ -0.49
HDAC1-209ENST00000484305 NR4A3Q92570 626 aa12.02□□□□□ -0.49
HDAC1-209ENST00000484305 VMP1Q96GC9 406 aa12.02□□□□□ -0.49
HDAC1-209ENST00000484305 SCMH1Q96GD3 660 aa12.02□□□□□ -0.49
HDAC1-209ENST00000484305 FRG2BQ96QU4 278 aa12.02□□□□□ -0.49
HDAC1-209ENST00000484305 C1QTNF3Q9BXJ4 246 aa12.02□□□□□ -0.49
HDAC1-209ENST00000484305 RPF2Q9H7B2 306 aaKnown RBP12.02□□□□□ -0.49
HDAC1-209ENST00000484305 DDX31Q9H8H2 851 aaKnown RBP12.02□□□□□ -0.49
HDAC1-209ENST00000484305 LRFN1Q9P244 771 aa12.02□□□□□ -0.49
HDAC1-209ENST00000484305 PCDHGB6Q9Y5F9 930 aa12.02□□□□□ -0.49
HDAC1-209ENST00000484305 SPTBN1Q01082 2364 aaKnown RBP12.02□□□□□ -0.49
HDAC1-209ENST00000484305 DIDO1Q9BTC0 2240 aaKnown RBP12.02□□□□□ -0.49
HDAC1-209ENST00000484305 A0A0A6YYD5 115 aa12.01□□□□□ -0.49
HDAC1-209ENST00000484305 A0A1W2PPM1 405 aa12.01□□□□□ -0.49
HDAC1-209ENST00000484305 TMEM200CA6NKL6 621 aa12.01□□□□□ -0.49
HDAC1-209ENST00000484305 WASHC1A8K0Z3 465 aa12.01□□□□□ -0.49
HDAC1-209ENST00000484305 CYSRT1A8MQ03 144 aa12.01□□□□□ -0.49
HDAC1-209ENST00000484305 PROM1O43490 865 aa12.01□□□□□ -0.49
HDAC1-209ENST00000484305 TMPRSS11DO60235 418 aa12.01□□□□□ -0.49
HDAC1-209ENST00000484305 OTCP00480 354 aa12.01□□□□□ -0.49
HDAC1-209ENST00000484305 CRYABP02511 175 aaKnown RBP12.01□□□□□ -0.49
HDAC1-209ENST00000484305 GBAP04062 536 aa12.01□□□□□ -0.49
HDAC1-209ENST00000484305 SP1P08047 785 aa12.01□□□□□ -0.49
HDAC1-209ENST00000484305 CD46P15529 392 aa12.01□□□□□ -0.49
HDAC1-209ENST00000484305 TNNI3P19429 210 aa12.01□□□□□ -0.49
HDAC1-209ENST00000484305 TAC1P20366 129 aa12.01□□□□□ -0.49
HDAC1-209ENST00000484305 TNFRSF8P28908 595 aa12.01□□□□□ -0.49
HDAC1-209ENST00000484305 TRHRP34981 398 aaPredicted RBP12.01□□□□□ -0.49
HDAC1-209ENST00000484305 CYB561P49447 251 aa12.01□□□□□ -0.49
HDAC1-209ENST00000484305 HLCSP50747 726 aa12.01□□□□□ -0.49
HDAC1-209ENST00000484305 HERVK_113P63132 956 aa12.01□□□□□ -0.49
HDAC1-209ENST00000484305 IGLV3-21P80748 117 aaPredicted RBP12.01□□□□□ -0.49
HDAC1-209ENST00000484305 TNFRSF17Q02223 184 aa12.01□□□□□ -0.49
HDAC1-209ENST00000484305 SERTAD2Q14140 314 aa12.01□□□□□ -0.49
HDAC1-209ENST00000484305 GGTA1PQ4G0N0 100 aa12.01□□□□□ -0.49
HDAC1-209ENST00000484305 UNC50Q53HI1 259 aa12.01□□□□□ -0.49
HDAC1-209ENST00000484305 SGO1Q5FBB7 561 aa12.01□□□□□ -0.49
HDAC1-209ENST00000484305 MRM1Q6IN84 353 aaKnown RBP12.01□□□□□ -0.49
HDAC1-209ENST00000484305 LETMD1Q6P1Q0 360 aa12.01□□□□□ -0.49
HDAC1-209ENST00000484305 C16orf47Q6ZP98 133 aaPredicted RBP12.01□□□□□ -0.49
HDAC1-209ENST00000484305 LCA5Q86VQ0 697 aa12.01□□□□□ -0.49
HDAC1-209ENST00000484305 HORMAD2Q8N7B1 307 aa12.01□□□□□ -0.49
HDAC1-209ENST00000484305 MORN4Q8NDC4 146 aa12.01□□□□□ -0.49
HDAC1-209ENST00000484305 ACMSDQ8TDX5 336 aa12.01□□□□□ -0.49
HDAC1-209ENST00000484305 UBLCP1Q8WVY7 318 aaPredicted RBP12.01□□□□□ -0.49
HDAC1-209ENST00000484305 UCN3Q969E3 161 aa12.01□□□□□ -0.49
HDAC1-209ENST00000484305 C5orf34Q96MH7 638 aa12.01□□□□□ -0.49
HDAC1-209ENST00000484305 CCDC77Q9BR77 488 aa12.01□□□□□ -0.49
HDAC1-209ENST00000484305 ERVK-6Q9BXR3 956 aa12.01□□□□□ -0.49
HDAC1-209ENST00000484305 TRIM45Q9H8W5 580 aaPredicted RBP12.01□□□□□ -0.49
HDAC1-209ENST00000484305 ANKZF1Q9H8Y5 726 aa12.01□□□□□ -0.49
HDAC1-209ENST00000484305 LIN28AQ9H9Z2 209 aaKnown RBP12.01□□□□□ -0.49
HDAC1-209ENST00000484305 FARSBQ9NSD9 589 aaKnown RBP12.01□□□□□ -0.49
HDAC1-209ENST00000484305 LYARQ9NX58 379 aaKnown RBP12.01□□□□□ -0.49
HDAC1-209ENST00000484305 MS4A12Q9NXJ0 267 aa12.01□□□□□ -0.49
HDAC1-209ENST00000484305 PHF11Q9UIL8 331 aa12.01□□□□□ -0.49
HDAC1-209ENST00000484305 ZNF225Q9UK10 706 aa12.01□□□□□ -0.49
HDAC1-209ENST00000484305 PPT2Q9UMR5 302 aa12.01□□□□□ -0.49
HDAC1-209ENST00000484305 OSGIN2Q9Y236 505 aa12.01□□□□□ -0.49
HDAC1-209ENST00000484305 SLC5A6Q9Y289 635 aa12.01□□□□□ -0.49
HDAC1-209ENST00000484305 ASB4Q9Y574 426 aa12.01□□□□□ -0.49
HDAC1-209ENST00000484305 EML6Q6ZMW3 1958 aa12.01□□□□□ -0.49
HDAC1-209ENST00000484305 A0A1W2PR48 441 aa12□□□□□ -0.49
HDAC1-209ENST00000484305 SYNDIG1LA6NDD5 238 aa12□□□□□ -0.49
HDAC1-209ENST00000484305 GLOD5A6NK44 160 aa12□□□□□ -0.49
HDAC1-209ENST00000484305 C17orf105B2RV13 164 aa12□□□□□ -0.49
HDAC1-209ENST00000484305 CDK2AP1O14519 115 aa12□□□□□ -0.49
HDAC1-209ENST00000484305 FCHO1O14526 889 aa12□□□□□ -0.49
HDAC1-209ENST00000484305 ITGA10O75578 1167 aa12□□□□□ -0.49
HDAC1-209ENST00000484305 SLC25A12O75746 678 aa12□□□□□ -0.49
HDAC1-209ENST00000484305 OR4F21O95013 312 aa12□□□□□ -0.49
HDAC1-209ENST00000484305 DDAH2O95865 285 aa12□□□□□ -0.49
HDAC1-209ENST00000484305 PDYNP01213 254 aa12□□□□□ -0.49
HDAC1-209ENST00000484305 FAM58BPP0C7Q3 252 aa12□□□□□ -0.49
HDAC1-209ENST00000484305 TLX1P31314 330 aaPredicted RBP12□□□□□ -0.49
HDAC1-209ENST00000484305 HSD17B3P37058 310 aa12□□□□□ -0.49
HDAC1-209ENST00000484305 KCNK10P57789 538 aa12□□□□□ -0.49
HDAC1-209ENST00000484305 FOLH1Q04609 750 aa12□□□□□ -0.49
HDAC1-209ENST00000484305 CLCQ05315 142 aa12□□□□□ -0.49
HDAC1-209ENST00000484305 MAPKAPK3Q16644 382 aa12□□□□□ -0.49
HDAC1-209ENST00000484305 ZNF678Q5SXM1 525 aa12□□□□□ -0.49
HDAC1-209ENST00000484305 SLC25A25Q6KCM7 469 aa12□□□□□ -0.49
HDAC1-209ENST00000484305 CYP20A1Q6UW02 462 aa12□□□□□ -0.49
HDAC1-209ENST00000484305 DGAT2L6Q6ZPD8 337 aa12□□□□□ -0.49
HDAC1-209ENST00000484305 SH2D5Q6ZV89 423 aa12□□□□□ -0.49
HDAC1-209ENST00000484305 GALNTL5Q7Z4T8 443 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 178.5 ms