RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 LRFN5Q96NI6 719 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 DEPDC7Q96QD5 511 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 CENPKQ9BS16 269 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 RTKNQ9BST9 563 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 EBPLQ9BY08 206 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 DPY30Q9C005 99 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 TRIM4Q9C037 500 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 B3GNT4Q9C0J1 378 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 STRADBQ9C0K7 418 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 TGIF2Q9GZN2 237 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 ACTR5Q9H9F9 607 aaPredicted RBP5.61□□□□□ -1.51
USP39-213ENST00000467885 ANKHQ9HCJ1 492 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 ZNF304Q9HCX3 659 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 SERHLQ9NQF3 203 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 LANCL2Q9NS86 450 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 MS4A12Q9NXJ0 267 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 SLAMF8Q9P0V8 285 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 FBXW2Q9UKT8 454 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 LOXL2Q9Y4K0 774 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 MAU2Q9Y6X3 613 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 GOLGA4Q13439 2230 aaKnown RBP5.6□□□□□ -1.51
USP39-213ENST00000467885 A0A1B0GX78 115 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 A0A1W2PS29 197 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 ARHGAP10A1A4S6 786 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 C1orf226A1L170 272 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 GLOD5A6NK44 160 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 MYO1GB0I1T2 1018 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 TGFBR3LH3BV60 316 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 EBAG9O00559 213 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 CNOT3O75175 753 aaKnown RBP5.6□□□□□ -1.51
USP39-213ENST00000467885 GUCY1B2O75343 617 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 RDH16O75452 317 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 JRKO75564 520 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 PRKRAO75569 313 aaKnown RBP5.6□□□□□ -1.51
USP39-213ENST00000467885 UBOX5O94941 541 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 TNFSF15O95150 251 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 GPR75O95800 540 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 AIFM1O95831 613 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 C1QCP02747 245 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 IL6P05231 212 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 HBQ1P09105 142 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 CAPN3P20807 821 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 IL10P22301 178 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 CPN2P22792 545 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 PTPN6P29350 595 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 PRDX6P30041 224 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 S100A3P33764 101 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 CPOXP36551 454 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 FRKP42685 505 aaPredicted RBP5.6□□□□□ -1.51
USP39-213ENST00000467885 SSR2P43308 183 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 AVPR1BP47901 424 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 XKP51811 444 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 MAPK10P53779 464 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 RAB38P57729 211 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 IGLV3-21P80748 117 aaPredicted RBP5.6□□□□□ -1.51
USP39-213ENST00000467885 DCDP81605 110 aaKnown RBP5.6□□□□□ -1.51
USP39-213ENST00000467885 DUSP2Q05923 314 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 ZNF763Q0D2J5 394 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 ABHD18Q0P651 414 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 MGAT2Q10469 447 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 STX5Q13190 355 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 EIF3IQ13347 325 aaKnown RBP5.6□□□□□ -1.51
USP39-213ENST00000467885 CYLC2Q14093 348 aaPredicted RBP5.6□□□□□ -1.51
USP39-213ENST00000467885 HEPACAMQ14CZ8 416 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 RTP5Q14D33 572 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 SPRED3Q2MJR0 410 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 PGS1Q32NB8 556 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 NKAIN1Q4KMZ8 207 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 LACTB2Q53H82 288 aaPredicted RBP5.6□□□□□ -1.51
USP39-213ENST00000467885 VWA2Q5GFL6 755 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 SPANXN4Q5MJ08 99 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 CPTPQ5TA50 214 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 OR4F3Q6IEY1 312 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 FAM180BQ6P0A1 224 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 SLC48A1Q6P1K1 146 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 C8orf82Q6P1X6 216 aaPredicted RBP5.6□□□□□ -1.51
USP39-213ENST00000467885 LYPD8Q6UX82 237 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 CEACAM20Q6UY09 585 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 DGAT2L6Q6ZPD8 337 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 IKBIPQ70UQ0 350 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 TICAM1Q8IUC6 712 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 TMEM126BQ8IUX1 230 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 OR4N5Q8IXE1 308 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 CCDC116Q8IYX3 515 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 DSELQ8IZU8 1212 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 TMEM132CQ8N3T6 1108 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 DPP10Q8N608 796 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 TTC29Q8NA56 475 aaPredicted RBP5.6□□□□□ -1.51
USP39-213ENST00000467885 PLPP5Q8NEB5 264 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 FBXO27Q8NI29 283 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 GTF2H4Q92759 462 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 COL26A1Q96A83 441 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 VPS33AQ96AX1 596 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 MIEF2Q96C03 454 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 SLC7A6OSQ96CW6 309 aaPredicted RBP5.6□□□□□ -1.51
USP39-213ENST00000467885 ERP27Q96DN0 273 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 CNRIP1Q96F85 164 aaPredicted RBP5.6□□□□□ -1.51
USP39-213ENST00000467885 ZNF764Q96H86 408 aaPredicted RBP5.6□□□□□ -1.51
USP39-213ENST00000467885 PEX11GQ96HA9 241 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 PRPF18Q99633 342 aaKnown RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms