RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 SRPRAP08240 638 aaKnown RBP4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 MELTFP08582 738 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 HOXD4P09016 255 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 TRIM49P0CI25 452 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 TRIM49CP0CI26 452 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 CDH1P12830 882 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 DAOP14920 347 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 CD1EP15812 388 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 FUT1P19526 365 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 C5AR1P21730 350 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 ACP1P24666 158 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 UGT2B10P36537 528 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 CEACAM6P40199 344 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 ARL1P40616 181 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 RPS5P46782 204 aaKnown RBP4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 SRP9P49458 86 aaKnown RBP4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 MEOX1P50221 254 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 SNU13P55769 128 aaKnown RBP4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 SUMO3P55854 103 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 RGS8P57771 180 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 TNNC1P63316 161 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 BNC1Q01954 994 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 CNTN2Q02246 1040 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 ZNF45Q02386 682 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 ZNF91Q05481 1191 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 MTAPQ13126 283 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 SELENBP1Q13228 472 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 ASAH1Q13510 395 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 NAE1Q13564 534 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 ALCAMQ13740 583 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 SELPLGQ14242 412 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 PCLAFQ15004 111 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 PGS1Q32NB8 556 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 RAB41Q5JT25 222 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 COLEC12Q5KU26 742 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 PHYHD1Q5SRE7 291 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 ARHGAP40Q5TG30 622 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 MEDAGQ5VYS4 303 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 ATG9BQ674R7 924 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 WBP2NLQ6ICG8 309 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 EFCAB12Q6NXP0 572 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 FBXO42Q6P3S6 717 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 VWA1Q6PCB0 445 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 INO80CQ6PI98 192 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 MOXD1Q6UVY6 613 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 FAM92BQ6ZTR7 304 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 SLC35D2Q76EJ3 337 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 TRAPPC11Q7Z392 1133 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 KCNK18Q7Z418 384 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 MYPOPQ86VE0 399 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 PHF13Q86YI8 300 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 PLD3Q8IV08 490 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 CCDC71Q8IV32 467 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 FAM71AQ8IYT1 594 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 EID3Q8N140 333 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 BCL6BQ8N143 479 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 SLC15A4Q8N697 577 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 FAM86B1Q8N7N1 296 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 RASGEF1AQ8N9B8 481 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 FAM47BQ8NA70 645 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 MFSD9Q8NBP5 474 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 MCUQ8NE86 351 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 BEST2Q8NFU1 509 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 RDM1Q8NG50 284 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 OR52H1Q8NGJ2 320 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 OR5H6Q8NGV6 325 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 DUSP19Q8WTR2 217 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 ATOH1Q92858 354 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 MCUR1Q96AQ8 359 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 C18orf25Q96B23 403 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 TMCO6Q96DC7 493 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 SLC41A3Q96GZ6 507 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 QKIQ96PU8 341 aaKnown RBP eCLIP4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 OR5M11Q96RB7 305 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 CGRRF1Q99675 332 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 CITED1Q99966 193 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 P2RY13Q9BPV8 354 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 FERMT1Q9BQL6 677 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 REEP2Q9BRK0 252 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 TCEAL7Q9BRU2 100 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 PIMREGQ9BSJ6 248 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 PCGF1Q9BSM1 259 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 NAT9Q9BTE0 207 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 PRRG3Q9BZD7 231 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 NMUR2Q9GZQ4 415 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 KAT8Q9H7Z6 458 aaKnown RBP4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 FN3KRPQ9HA64 309 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 MLXIPQ9HAP2 919 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 SMURF2Q9HAU4 748 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 USP29Q9HBJ7 922 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 SMURF1Q9HCE7 757 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 ARHGEF3Q9NR81 526 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 ABCB10Q9NRK6 738 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 CATSPERZQ9NTU4 200 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 P4HTMQ9NXG6 502 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 TREM2Q9NZC2 230 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 ADAM22Q9P0K1 906 aa4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 KLHL8Q9P2G9 620 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 MYEF2Q9P2K5 600 aaKnown RBP4.51□□□□□ -1.69
HMGB3P9-201ENST00000441799 ARPP21Q9UBL0 812 aaPredicted RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms