RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 EMCNQ9ULC0 261 aa18.96■□□□□ 0.63
GTF3A-202ENST00000419181 ATG4BQ9Y4P1 393 aa18.96■□□□□ 0.63
GTF3A-202ENST00000419181 TRBV11-1A0A0K0K1C0 115 aa18.95■□□□□ 0.62
GTF3A-202ENST00000419181 SMIM23A6NLE4 172 aa18.95■□□□□ 0.62
GTF3A-202ENST00000419181 CDK2AP1O14519 115 aa18.95■□□□□ 0.62
GTF3A-202ENST00000419181 TMPRSS11DO60235 418 aa18.95■□□□□ 0.62
GTF3A-202ENST00000419181 GLRA3O75311 464 aa18.95■□□□□ 0.62
GTF3A-202ENST00000419181 SUPT7LO94864 414 aa18.95■□□□□ 0.62
GTF3A-202ENST00000419181 IFNA16P05015 189 aa18.95■□□□□ 0.62
GTF3A-202ENST00000419181 IMPDH1P20839 514 aa18.95■□□□□ 0.62
GTF3A-202ENST00000419181 ST13P50502 369 aaKnown RBP18.95■□□□□ 0.62
GTF3A-202ENST00000419181 PRKAA2P54646 552 aa18.95■□□□□ 0.62
GTF3A-202ENST00000419181 MLF1P58340 268 aa18.95■□□□□ 0.62
GTF3A-202ENST00000419181 IGLV3-21P80748 117 aaPredicted RBP18.95■□□□□ 0.62
GTF3A-202ENST00000419181 TNFRSF17Q02223 184 aa18.95■□□□□ 0.62
GTF3A-202ENST00000419181 SERTAD2Q14140 314 aa18.95■□□□□ 0.62
GTF3A-202ENST00000419181 NUDT13Q86X67 352 aa18.95■□□□□ 0.62
GTF3A-202ENST00000419181 SLC22A9Q8IVM8 553 aa18.95■□□□□ 0.62
GTF3A-202ENST00000419181 TMEM132CQ8N3T6 1108 aa18.95■□□□□ 0.62
GTF3A-202ENST00000419181 PTPMT1Q8WUK0 201 aaPredicted RBP18.95■□□□□ 0.62
GTF3A-202ENST00000419181 NCLNQ969V3 563 aa18.95■□□□□ 0.62
GTF3A-202ENST00000419181 L3HYPDHQ96EM0 354 aa18.95■□□□□ 0.62
GTF3A-202ENST00000419181 SIGLEC12Q96PQ1 595 aa18.95■□□□□ 0.62
GTF3A-202ENST00000419181 SLX1AQ9BQ83 275 aa18.95■□□□□ 0.62
GTF3A-202ENST00000419181 ELOVL6Q9H5J4 265 aa18.95■□□□□ 0.62
GTF3A-202ENST00000419181 RPF2Q9H7B2 306 aaKnown RBP18.95■□□□□ 0.62
GTF3A-202ENST00000419181 LYARQ9NX58 379 aaKnown RBP18.95■□□□□ 0.62
GTF3A-202ENST00000419181 TRPS1Q9UHF7 1281 aa18.95■□□□□ 0.62
GTF3A-202ENST00000419181 ASB4Q9Y574 426 aa18.95■□□□□ 0.62
GTF3A-202ENST00000419181 PCDHGB6Q9Y5F9 930 aa18.95■□□□□ 0.62
GTF3A-202ENST00000419181 MYOCOSA0A1B0GUC4 107 aa18.94■□□□□ 0.62
GTF3A-202ENST00000419181 PROM1O43490 865 aa18.94■□□□□ 0.62
GTF3A-202ENST00000419181 FGF17O60258 216 aa18.94■□□□□ 0.62
GTF3A-202ENST00000419181 CDH16O75309 829 aa18.94■□□□□ 0.62
GTF3A-202ENST00000419181 SLU7O95391 586 aaKnown RBP18.94■□□□□ 0.62
GTF3A-202ENST00000419181 KRT15P19012 456 aa18.94■□□□□ 0.62
GTF3A-202ENST00000419181 TPP2P29144 1249 aaPredicted RBP18.94■□□□□ 0.62
GTF3A-202ENST00000419181 ID2Q02363 134 aa18.94■□□□□ 0.62
GTF3A-202ENST00000419181 OR1C1Q15619 314 aa18.94■□□□□ 0.62
GTF3A-202ENST00000419181 ZNF766Q5HY98 468 aa18.94■□□□□ 0.62
GTF3A-202ENST00000419181 C18orf63Q68DL7 685 aa18.94■□□□□ 0.62
GTF3A-202ENST00000419181 ZNF324BQ6AW86 544 aaPredicted RBP18.94■□□□□ 0.62
GTF3A-202ENST00000419181 BCORP1Q8N888 145 aa18.94■□□□□ 0.62
GTF3A-202ENST00000419181 ST6GALNAC3Q8NDV1 305 aa18.94■□□□□ 0.62
GTF3A-202ENST00000419181 C7orf57Q8NEG2 295 aa18.94■□□□□ 0.62
GTF3A-202ENST00000419181 OR14A16Q8NHC5 309 aa18.94■□□□□ 0.62
GTF3A-202ENST00000419181 DAZLQ92904 295 aaKnown RBP18.94■□□□□ 0.62
GTF3A-202ENST00000419181 ZNF382Q96SR6 550 aa18.94■□□□□ 0.62
GTF3A-202ENST00000419181 FARSBQ9NSD9 589 aaKnown RBP18.94■□□□□ 0.62
GTF3A-202ENST00000419181 CLCA3PQ9Y6N3 262 aa18.94■□□□□ 0.62
GTF3A-202ENST00000419181 USP9YO00507 2555 aaPredicted RBP18.93■□□□□ 0.62
GTF3A-202ENST00000419181 SPTAN1Q13813 2472 aaKnown RBP18.93■□□□□ 0.62
GTF3A-202ENST00000419181 ANKUB1A6NFN9 424 aa18.93■□□□□ 0.62
GTF3A-202ENST00000419181 NEURL1O76050 574 aa18.93■□□□□ 0.62
GTF3A-202ENST00000419181 OR4F21O95013 312 aa18.93■□□□□ 0.62
GTF3A-202ENST00000419181 NUDT17P0C025 328 aa18.93■□□□□ 0.62
GTF3A-202ENST00000419181 FAM58BPP0C7Q3 252 aa18.93■□□□□ 0.62
GTF3A-202ENST00000419181 TLX1P31314 330 aaPredicted RBP18.93■□□□□ 0.62
GTF3A-202ENST00000419181 BUD31P41223 144 aaPredicted RBP18.93■□□□□ 0.62
GTF3A-202ENST00000419181 EIF2S3LQ2VIR3 472 aaKnown RBP18.93■□□□□ 0.62
GTF3A-202ENST00000419181 SGO1Q5FBB7 561 aa18.93■□□□□ 0.62
GTF3A-202ENST00000419181 ZNF468Q5VIY5 522 aaPredicted RBP18.93■□□□□ 0.62
GTF3A-202ENST00000419181 FAM219BQ5XKK7 198 aa18.93■□□□□ 0.62
GTF3A-202ENST00000419181 SPINK14Q6IE38 97 aa18.93■□□□□ 0.62
GTF3A-202ENST00000419181 WDR93Q6P2C0 686 aa18.93■□□□□ 0.62
GTF3A-202ENST00000419181 CYP20A1Q6UW02 462 aa18.93■□□□□ 0.62
GTF3A-202ENST00000419181 OR4N5Q8IXE1 308 aa18.93■□□□□ 0.62
GTF3A-202ENST00000419181 MORN4Q8NDC4 146 aa18.93■□□□□ 0.62
GTF3A-202ENST00000419181 AENQ8WTP8 325 aaKnown RBP18.93■□□□□ 0.62
GTF3A-202ENST00000419181 TANKQ92844 425 aa18.93■□□□□ 0.62
GTF3A-202ENST00000419181 MRPL1Q9BYD6 325 aaKnown RBP18.93■□□□□ 0.62
GTF3A-202ENST00000419181 TRIM45Q9H8W5 580 aaPredicted RBP18.93■□□□□ 0.62
GTF3A-202ENST00000419181 OLAHQ9NV23 265 aa18.93■□□□□ 0.62
GTF3A-202ENST00000419181 SNX6Q9UNH7 406 aa18.93■□□□□ 0.62
GTF3A-202ENST00000419181 A0A1W2PR48 441 aa18.92■□□□□ 0.62
GTF3A-202ENST00000419181 G3V2L1 256 aa18.92■□□□□ 0.62
GTF3A-202ENST00000419181 PRKRAO75569 313 aaKnown RBP18.92■□□□□ 0.62
GTF3A-202ENST00000419181 RASAL1O95294 804 aa18.92■□□□□ 0.62
GTF3A-202ENST00000419181 DDAH2O95865 285 aa18.92■□□□□ 0.62
GTF3A-202ENST00000419181 PDYNP01213 254 aa18.92■□□□□ 0.62
GTF3A-202ENST00000419181 GBAP04062 536 aa18.92■□□□□ 0.62
GTF3A-202ENST00000419181 PROCP04070 461 aa18.92■□□□□ 0.62
GTF3A-202ENST00000419181 NR2F6P10588 404 aa18.92■□□□□ 0.62
GTF3A-202ENST00000419181 EDN3P14138 238 aa18.92■□□□□ 0.62
GTF3A-202ENST00000419181 TRHRP34981 398 aaPredicted RBP18.92■□□□□ 0.62
GTF3A-202ENST00000419181 OC90Q02509 493 aaPredicted RBP18.92■□□□□ 0.62
GTF3A-202ENST00000419181 FOLH1Q04609 750 aa18.92■□□□□ 0.62
GTF3A-202ENST00000419181 FHL5Q5TD97 284 aa18.92■□□□□ 0.62
GTF3A-202ENST00000419181 ZYG11AQ6WRX3 759 aa18.92■□□□□ 0.62
GTF3A-202ENST00000419181 GPRIN3Q6ZVF9 776 aa18.92■□□□□ 0.62
GTF3A-202ENST00000419181 OR2W6PQ8NHA6 318 aa18.92■□□□□ 0.62
GTF3A-202ENST00000419181 THAP3Q8WTV1 239 aaPredicted RBP18.92■□□□□ 0.62
GTF3A-202ENST00000419181 SELENOMQ8WWX9 145 aa18.92■□□□□ 0.62
GTF3A-202ENST00000419181 CCDC126Q96EE4 140 aa18.92■□□□□ 0.62
GTF3A-202ENST00000419181 SCMH1Q96GD3 660 aa18.92■□□□□ 0.62
GTF3A-202ENST00000419181 HES7Q9BYE0 225 aa18.92■□□□□ 0.62
GTF3A-202ENST00000419181 BRF2Q9HAW0 419 aa18.92■□□□□ 0.62
GTF3A-202ENST00000419181 LRFN1Q9P244 771 aa18.92■□□□□ 0.62
GTF3A-202ENST00000419181 ADAM29Q9UKF5 820 aa18.92■□□□□ 0.62
GTF3A-202ENST00000419181 ZGRF1Q86YA3 2104 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms