RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 CD8B2A6NJW9 211 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 SNTNA6NMZ2 147 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 A6NNC1 897 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 ZSCAN12O43309 604 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 OR1F1O43749 312 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 SCO2O43819 266 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 RPS6KA5O75582 802 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 NEURL1O76050 574 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 BAG3O95817 575 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 LYNP07948 512 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 ITGAMP11215 1152 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 ANPEPP15144 967 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 ZFP36P26651 326 aaKnown RBP4.6□□□□□ -1.67
GABPB1-204ENST00000396464 DCTDP32321 178 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 APOBEC1P41238 236 aaKnown RBP4.6□□□□□ -1.67
GABPB1-204ENST00000396464 RAB9AP51151 201 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 TPMTP51580 245 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 C21orf59P57076 290 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 NXPH1P58417 271 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 RAB11AP62491 216 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 BLOC1S1P78537 153 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 MAT1AQ00266 395 aaKnown RBP4.6□□□□□ -1.67
GABPB1-204ENST00000396464 PNRC1Q12796 327 aaPredicted RBP4.6□□□□□ -1.67
GABPB1-204ENST00000396464 PLA2G7Q13093 441 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 NFATC2Q13469 925 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 ANGPT1Q15389 498 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 TGFBIQ15582 683 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 RAB11BQ15907 218 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 RBBP7Q16576 425 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 PPP6R3Q5H9R7 873 aaPredicted RBP4.6□□□□□ -1.67
GABPB1-204ENST00000396464 GRTP1Q5TC63 336 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 LCN1P1Q5VSP4 162 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 TMEM53Q6P2H8 277 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 RNASEKQ6P5S7 137 aaKnown RBP4.6□□□□□ -1.67
GABPB1-204ENST00000396464 DCDC5Q6ZRR9 648 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 SLC24A5Q71RS6 500 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 VRK2Q86Y07 508 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 FOXRED2Q8IWF2 684 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 CCDC36Q8IYA8 594 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 BEST3Q8N1M1 668 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 PYROXD2Q8N2H3 581 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 ANGPTL6Q8NI99 470 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 NDNFQ8TB73 568 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 SLC44A1Q8WWI5 657 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 RPL3LQ92901 407 aaKnown RBP4.6□□□□□ -1.67
GABPB1-204ENST00000396464 TOP1MTQ969P6 601 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 TMEM45BQ96B21 275 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 PINX1Q96BK5 328 aaKnown RBP4.6□□□□□ -1.67
GABPB1-204ENST00000396464 COQ8BQ96D53 544 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 RAB39BQ96DA2 213 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 MRPL53Q96EL3 112 aaKnown RBP4.6□□□□□ -1.67
GABPB1-204ENST00000396464 IGSF21Q96ID5 467 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 THAP7Q9BT49 309 aaPredicted RBP4.6□□□□□ -1.67
GABPB1-204ENST00000396464 WRAP53Q9BUR4 548 aaKnown RBP4.6□□□□□ -1.67
GABPB1-204ENST00000396464 ALG8Q9BVK2 526 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 ALOXE3Q9BYJ1 711 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 PRRG4Q9BZD6 226 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 SLA2Q9H6Q3 261 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 TMEM165Q9HC07 324 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 PNO1Q9NRX1 252 aaKnown RBP4.6□□□□□ -1.67
GABPB1-204ENST00000396464 MIS18AQ9NYP9 233 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 MTCH1Q9NZJ7 389 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 HACD3Q9P035 362 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 WDR83OSQ9Y284 106 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 CA5BQ9Y2D0 317 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 MAP3K2Q9Y2U5 619 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.6□□□□□ -1.67
GABPB1-204ENST00000396464 KLF2Q9Y5W3 355 aaPredicted RBP4.6□□□□□ -1.67
GABPB1-204ENST00000396464 ZMYM6O95789 1325 aa4.6□□□□□ -1.67
GABPB1-204ENST00000396464 CUX2O14529 1486 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 CC2D2AQ9P2K1 1620 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 WIZO95785 1651 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 TRBV5-7A0A0A0MS05 114 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 CASTOR2A6NHX0 329 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 UNC119BA6NIH7 251 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 MARCH11A6NNE9 402 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 WWP2O00308 870 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 ZW10O43264 779 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 CHMP2AO43633 222 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 DUX1O43812 170 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 TIMM8AO60220 97 aaPredicted RBP4.59□□□□□ -1.67
GABPB1-204ENST00000396464 CDKL5O76039 1030 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 CDK14O94921 469 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 CRYGBP07316 175 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 SERPINF2P08697 491 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 NPSP0C0P6 89 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 POU2F1P14859 743 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 CYP11B1P15538 503 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 GOT1P17174 413 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 KCNJ4P48050 445 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 LIMK2P53671 638 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 YWHAGP61981 247 aaKnown RBP eCLIP4.59□□□□□ -1.67
GABPB1-204ENST00000396464 ZXDBP98169 803 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 FAM27E3Q08E93 113 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 GAGE2BQ13066 116 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 NME3Q13232 169 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 ZNF528Q3MIS6 628 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 DCAF4L1Q3SXM0 396 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 GAGE2EQ4V326 116 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 TMEM225Q6GV28 225 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms