RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 ZNF140P52738 457 aaPredicted RBP16.37■□□□□ 0.21
TRAPPC11-201ENST00000334690 IST1P53990 364 aa16.37■□□□□ 0.21
TRAPPC11-201ENST00000334690 SLAMF1Q13291 335 aa16.37■□□□□ 0.21
TRAPPC11-201ENST00000334690 UBXN2BQ14CS0 331 aa16.37■□□□□ 0.21
TRAPPC11-201ENST00000334690 DHCR24Q15392 516 aa16.37■□□□□ 0.21
TRAPPC11-201ENST00000334690 PAQR9Q6ZVX9 377 aa16.37■□□□□ 0.21
TRAPPC11-201ENST00000334690 COMMD6Q7Z4G1 85 aa16.37■□□□□ 0.21
TRAPPC11-201ENST00000334690 ASPGQ86U10 573 aa16.37■□□□□ 0.21
TRAPPC11-201ENST00000334690 NUP43Q8NFH3 380 aa16.37■□□□□ 0.21
TRAPPC11-201ENST00000334690 ARRDC2Q8TBH0 407 aa16.37■□□□□ 0.21
TRAPPC11-201ENST00000334690 PHOSPHO1Q8TCT1 267 aa16.37■□□□□ 0.21
TRAPPC11-201ENST00000334690 EBF1Q9UH73 591 aa16.37■□□□□ 0.21
TRAPPC11-201ENST00000334690 SH3D21A4FU49 640 aa16.37■□□□□ 0.21
TRAPPC11-201ENST00000334690 RPP14O95059 124 aaKnown RBP16.37■□□□□ 0.21
TRAPPC11-201ENST00000334690 CTSOP43234 321 aaPredicted RBP16.37■□□□□ 0.21
TRAPPC11-201ENST00000334690 MAGEA3P43357 314 aa16.37■□□□□ 0.21
TRAPPC11-201ENST00000334690 OR3A3P47888 321 aa16.37■□□□□ 0.21
TRAPPC11-201ENST00000334690 OR3A2P47893 321 aa16.37■□□□□ 0.21
TRAPPC11-201ENST00000334690 APLP1P51693 650 aa16.37■□□□□ 0.21
TRAPPC11-201ENST00000334690 CD83Q01151 205 aa16.37■□□□□ 0.21
TRAPPC11-201ENST00000334690 MPP7Q5T2T1 576 aa16.37■□□□□ 0.21
TRAPPC11-201ENST00000334690 TMEM236Q5W0B7 351 aa16.37■□□□□ 0.21
TRAPPC11-201ENST00000334690 ZBTB8BQ8NAP8 495 aaPredicted RBP16.37■□□□□ 0.21
TRAPPC11-201ENST00000334690 METTL2AQ96IZ6 378 aaKnown RBP16.37■□□□□ 0.21
TRAPPC11-201ENST00000334690 DPH7Q9BTV6 452 aa16.37■□□□□ 0.21
TRAPPC11-201ENST00000334690 SLC2A4RGQ9NR83 387 aa16.37■□□□□ 0.21
TRAPPC11-201ENST00000334690 CENPMQ9NSP4 180 aa16.37■□□□□ 0.21
TRAPPC11-201ENST00000334690 CLDND1Q9NY35 253 aa16.37■□□□□ 0.21
TRAPPC11-201ENST00000334690 GPR45Q9Y5Y3 372 aa16.37■□□□□ 0.21
TRAPPC11-201ENST00000334690 WRBO00258 174 aa16.37■□□□□ 0.21
TRAPPC11-201ENST00000334690 FLRT2O43155 660 aa16.37■□□□□ 0.21
TRAPPC11-201ENST00000334690 NR2C1P13056 603 aa16.37■□□□□ 0.21
TRAPPC11-201ENST00000334690 C6P13671 934 aa16.37■□□□□ 0.21
TRAPPC11-201ENST00000334690 ZNF181Q2M3W8 571 aa16.37■□□□□ 0.21
TRAPPC11-201ENST00000334690 TMEM25Q86YD3 366 aa16.37■□□□□ 0.21
TRAPPC11-201ENST00000334690 MFSD2AQ8NA29 543 aa16.37■□□□□ 0.21
TRAPPC11-201ENST00000334690 NEIL3Q8TAT5 605 aa16.37■□□□□ 0.21
TRAPPC11-201ENST00000334690 TM9SF2Q99805 663 aa16.37■□□□□ 0.21
TRAPPC11-201ENST00000334690 WACQ9BTA9 647 aa16.37■□□□□ 0.21
TRAPPC11-201ENST00000334690 STOX2Q9P2F5 926 aaPredicted RBP16.37■□□□□ 0.21
TRAPPC11-201ENST00000334690 C2orf92A0A1B0GVN3 265 aa16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 TCRBV3S1A0A5B6 114 aa16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 GM2AP17900 193 aa16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 C18orf21Q32NC0 220 aaPredicted RBP16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 PRRT3Q5FWE3 981 aa16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 CATSPEREQ5SY80 951 aa16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 OR7G3Q8NG95 312 aa16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 COQ8BQ96D53 544 aa16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 APIPQ96GX9 242 aa16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 CHIAQ9BZP6 476 aa16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 HEBP1Q9NRV9 189 aa16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 HRASLS2Q9NWW9 162 aa16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 A8MUA0 341 aa16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 POLR2CP19387 275 aaPredicted RBP16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 PROX2Q3B8N5 592 aa16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 UGT3A2Q3SY77 523 aa16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 GTDC1Q4AE62 458 aa16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 LIPKQ5VXJ0 399 aa16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 ENAMQ9NRM1 1142 aa16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 GATBO75879 557 aaKnown RBP16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 AHSA1O95433 338 aa16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 IFNA7P01567 189 aa16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 RAB2AP61019 212 aa16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 MLLT1Q03111 559 aaPredicted RBP16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 PGM2L1Q6PCE3 622 aa16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 SYCE2Q6PIF2 218 aa16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 TRIM73Q86UV7 250 aa16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 PLA2G15Q8NCC3 412 aa16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 TFAP2CQ92754 450 aa16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 AGPAT4Q9NRZ5 378 aa16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 VAPAQ9P0L0 249 aa16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 HCN2Q9UL51 889 aa16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 BAIAP2Q9UQB8 552 aa16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 ERVK-11Q9UQG0 969 aa16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 CACNA1SQ13698 1873 aa16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 CKMT1AP12532 417 aa16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 STT3AP46977 705 aa16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 EIF5AP63241 154 aaKnown RBP16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 SORCS1Q8WY21 1168 aa16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 WDR92Q96MX6 357 aa16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 FUZQ9BT04 418 aa16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 NTMT1Q9BV86 223 aa16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 RNF186Q9NXI6 227 aa16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 WDR37Q9Y2I8 494 aa16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 TRPM3Q9HCF6 1732 aaPredicted RBP16.36■□□□□ 0.21
TRAPPC11-201ENST00000334690 METTL21EPA6NDL7 271 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 OR5K4A6NMS3 321 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 C2orf74A8MZ97 194 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 LSM1O15116 133 aaKnown RBP16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 MRPS14O60783 128 aaKnown RBP16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 CYB5AP00167 134 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 ZNF20P17024 532 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 SYN1P17600 705 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 PUDPQ08623 228 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 TRAM1Q15629 374 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 C4orf46Q504U0 113 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 KCTD11Q693B1 232 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 ZNF613Q6PF04 617 aa16.35■□□□□ 0.21
TRAPPC11-201ENST00000334690 GALNTL5Q7Z4T8 443 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms