RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 GTF2BQ00403 316 aa15.8■□□□□ 0.12
PTCH1-201ENST00000331920 GHRHRQ02643 423 aa15.8■□□□□ 0.12
PTCH1-201ENST00000331920 RSPRY1Q96DX4 576 aa15.8■□□□□ 0.12
PTCH1-201ENST00000331920 ZNF446Q9NWS9 450 aa15.8■□□□□ 0.12
PTCH1-201ENST00000331920 RCCD1A6NED2 376 aa15.8■□□□□ 0.12
PTCH1-201ENST00000331920 NEMP2A6NFY4 417 aa15.8■□□□□ 0.12
PTCH1-201ENST00000331920 TXNL1O43396 289 aa15.8■□□□□ 0.12
PTCH1-201ENST00000331920 ZNF780AO75290 641 aaPredicted RBP15.8■□□□□ 0.12
PTCH1-201ENST00000331920 C8AP07357 584 aa15.8■□□□□ 0.12
PTCH1-201ENST00000331920 CDK6Q00534 326 aa15.8■□□□□ 0.12
PTCH1-201ENST00000331920 OGDHQ02218 1023 aa15.8■□□□□ 0.12
PTCH1-201ENST00000331920 PHOX2BQ99453 314 aa15.8■□□□□ 0.12
PTCH1-201ENST00000331920 ZNF536O15090 1300 aa15.8■□□□□ 0.12
PTCH1-201ENST00000331920 XRCC1P18887 633 aaPredicted RBP15.8■□□□□ 0.12
PTCH1-201ENST00000331920 CHRNB4P30926 498 aa15.8■□□□□ 0.12
PTCH1-201ENST00000331920 VSX2P58304 361 aaPredicted RBP15.8■□□□□ 0.12
PTCH1-201ENST00000331920 PRRT3Q5FWE3 981 aa15.8■□□□□ 0.12
PTCH1-201ENST00000331920 ANKRD22Q5VYY1 191 aa15.8■□□□□ 0.12
PTCH1-201ENST00000331920 ASRGL1Q7L266 308 aa15.8■□□□□ 0.12
PTCH1-201ENST00000331920 PIM3Q86V86 326 aa15.8■□□□□ 0.12
PTCH1-201ENST00000331920 PPIL3Q9H2H8 161 aaKnown RBP15.8■□□□□ 0.12
PTCH1-201ENST00000331920 MYH13Q9UKX3 1938 aa15.8■□□□□ 0.12
PTCH1-201ENST00000331920 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.8■□□□□ 0.12
PTCH1-201ENST00000331920 H3BSA7 217 aa15.8■□□□□ 0.12
PTCH1-201ENST00000331920 RAB3BP20337 219 aa15.8■□□□□ 0.12
PTCH1-201ENST00000331920 ZFP82Q8N141 532 aa15.8■□□□□ 0.12
PTCH1-201ENST00000331920 RPL26L1Q9UNX3 145 aaKnown RBP15.8■□□□□ 0.12
PTCH1-201ENST00000331920 MED14O60244 1454 aa15.8■□□□□ 0.12
PTCH1-201ENST00000331920 AFDNP55196 1824 aaKnown RBP15.8■□□□□ 0.12
PTCH1-201ENST00000331920 CELP19835 753 aa15.79■□□□□ 0.12
PTCH1-201ENST00000331920 AGTR1P30556 359 aa15.79■□□□□ 0.12
PTCH1-201ENST00000331920 FAIMQ9NVQ4 179 aa15.79■□□□□ 0.12
PTCH1-201ENST00000331920 TEX10Q9NXF1 929 aaPredicted RBP15.79■□□□□ 0.12
PTCH1-201ENST00000331920 FTSJ1Q9UET6 329 aa15.79■□□□□ 0.12
PTCH1-201ENST00000331920 ESR1P03372 595 aa15.79■□□□□ 0.12
PTCH1-201ENST00000331920 TMEM198Q66K66 360 aa15.79■□□□□ 0.12
PTCH1-201ENST00000331920 C22orf42Q6IC83 251 aa15.79■□□□□ 0.12
PTCH1-201ENST00000331920 MON1BQ7L1V2 547 aa15.79■□□□□ 0.12
PTCH1-201ENST00000331920 OR51T1Q8NGJ9 327 aa15.79■□□□□ 0.12
PTCH1-201ENST00000331920 OR13C4Q8NGS5 318 aa15.79■□□□□ 0.12
PTCH1-201ENST00000331920 OR1S1Q8NH92 325 aa15.79■□□□□ 0.12
PTCH1-201ENST00000331920 HSH2DQ96JZ2 352 aa15.79■□□□□ 0.12
PTCH1-201ENST00000331920 CNTNAP3BQ96NU0 1288 aa15.79■□□□□ 0.12
PTCH1-201ENST00000331920 PRDM9Q9NQV7 894 aa15.79■□□□□ 0.12
PTCH1-201ENST00000331920 WDR37Q9Y2I8 494 aa15.79■□□□□ 0.12
PTCH1-201ENST00000331920 MMP20O60882 483 aa15.79■□□□□ 0.12
PTCH1-201ENST00000331920 DNASE1P24855 282 aa15.79■□□□□ 0.12
PTCH1-201ENST00000331920 ZNF367Q7RTV3 350 aa15.79■□□□□ 0.12
PTCH1-201ENST00000331920 GTPBP8Q8N3Z3 284 aaPredicted RBP15.79■□□□□ 0.12
PTCH1-201ENST00000331920 C7orf26Q96N11 449 aa15.79■□□□□ 0.12
PTCH1-201ENST00000331920 TGM7Q96PF1 710 aa15.79■□□□□ 0.12
PTCH1-201ENST00000331920 VRK1Q99986 396 aaPredicted RBP15.79■□□□□ 0.12
PTCH1-201ENST00000331920 SUCNR1Q9BXA5 334 aa15.79■□□□□ 0.12
PTCH1-201ENST00000331920 LIN28AQ9H9Z2 209 aaKnown RBP15.79■□□□□ 0.12
PTCH1-201ENST00000331920 CNTN6Q9UQ52 1028 aa15.79■□□□□ 0.12
PTCH1-201ENST00000331920 EDN3P14138 238 aa15.79■□□□□ 0.12
PTCH1-201ENST00000331920 HYAL4Q2M3T9 481 aa15.79■□□□□ 0.12
PTCH1-201ENST00000331920 C14orf28Q4W4Y0 310 aa15.79■□□□□ 0.12
PTCH1-201ENST00000331920 ACTR6Q9GZN1 396 aa15.79■□□□□ 0.12
PTCH1-201ENST00000331920 ATG12O94817 140 aa15.79■□□□□ 0.12
PTCH1-201ENST00000331920 SIX3O95343 332 aaPredicted RBP15.79■□□□□ 0.12
PTCH1-201ENST00000331920 STEAP3Q658P3 488 aa15.79■□□□□ 0.12
PTCH1-201ENST00000331920 MAPK15Q8TD08 544 aa15.79■□□□□ 0.12
PTCH1-201ENST00000331920 SLC6A16Q9GZN6 736 aa15.79■□□□□ 0.12
PTCH1-201ENST00000331920 INMT-MINDY4F8WBC2 141 aa15.79■□□□□ 0.12
PTCH1-201ENST00000331920 GRM5P41594 1212 aa15.79■□□□□ 0.12
PTCH1-201ENST00000331920 CST9LP1Q5W188 147 aa15.79■□□□□ 0.12
PTCH1-201ENST00000331920 CANT1Q8WVQ1 401 aa15.79■□□□□ 0.12
PTCH1-201ENST00000331920 FBXL20Q96IG2 436 aa15.79■□□□□ 0.12
PTCH1-201ENST00000331920 EIF2B3Q9NR50 452 aaKnown RBP15.79■□□□□ 0.12
PTCH1-201ENST00000331920 ZFPM1Q8IX07 1006 aa15.78■□□□□ 0.12
PTCH1-201ENST00000331920 LRRC52Q8N7C0 313 aa15.78■□□□□ 0.12
PTCH1-201ENST00000331920 DOK4Q8TEW6 326 aa15.78■□□□□ 0.12
PTCH1-201ENST00000331920 NPRL2Q8WTW4 380 aa15.78■□□□□ 0.12
PTCH1-201ENST00000331920 TAAR8Q969N4 342 aa15.78■□□□□ 0.12
PTCH1-201ENST00000331920 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.78■□□□□ 0.12
PTCH1-201ENST00000331920 LOC102723532A0A0G2JNH3 316 aa15.78■□□□□ 0.12
PTCH1-201ENST00000331920 RTCAO00442 366 aaKnown RBP15.78■□□□□ 0.12
PTCH1-201ENST00000331920 ADORA3P0DMS8 318 aa15.78■□□□□ 0.12
PTCH1-201ENST00000331920 ADH5P11766 374 aa15.78■□□□□ 0.12
PTCH1-201ENST00000331920 ASPAP45381 313 aa15.78■□□□□ 0.12
PTCH1-201ENST00000331920 NDST2P52849 883 aa15.78■□□□□ 0.12
PTCH1-201ENST00000331920 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.78■□□□□ 0.122e-6■■■■■ 64.7
PTCH1-201ENST00000331920 COG8Q96MW5 612 aa15.78■□□□□ 0.12
PTCH1-201ENST00000331920 CCM2Q9BSQ5 444 aa15.78■□□□□ 0.12
PTCH1-201ENST00000331920 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.78■□□□□ 0.12
PTCH1-201ENST00000331920 PXDNLA1KZ92 1463 aa15.78■□□□□ 0.12
PTCH1-201ENST00000331920 CEMIPQ8WUJ3 1361 aa15.78■□□□□ 0.12
PTCH1-201ENST00000331920 PRKACAP17612 351 aa15.78■□□□□ 0.12
PTCH1-201ENST00000331920 MYLK3Q32MK0 819 aa15.78■□□□□ 0.12
PTCH1-201ENST00000331920 ZNF404Q494X3 552 aa15.78■□□□□ 0.12
PTCH1-201ENST00000331920 PAQR3Q6TCH7 311 aa15.78■□□□□ 0.12
PTCH1-201ENST00000331920 TMEM185AQ8NFB2 350 aa15.78■□□□□ 0.12
PTCH1-201ENST00000331920 PPTC7Q8NI37 304 aa15.78■□□□□ 0.12
PTCH1-201ENST00000331920 MAGEH1Q9H213 219 aa15.78■□□□□ 0.12
PTCH1-201ENST00000331920 IL21RQ9HBE5 538 aa15.78■□□□□ 0.12
PTCH1-201ENST00000331920 TAS2R9Q9NYW1 312 aa15.78■□□□□ 0.12
PTCH1-201ENST00000331920 CHEK1O14757 476 aa15.78■□□□□ 0.12
PTCH1-201ENST00000331920 PAK4O96013 591 aaPredicted RBP15.78■□□□□ 0.12
PTCH1-201ENST00000331920 CD79AP11912 226 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms