RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 TSPYL5Q86VY4 417 aaPredicted RBP16.01■□□□□ 0.15
PHRF1-201ENST00000264555 PMEPA1Q969W9 287 aa16.01■□□□□ 0.15
PHRF1-201ENST00000264555 CNDP2Q96KP4 475 aaKnown RBP16.01■□□□□ 0.15
PHRF1-201ENST00000264555 GORASP2Q9H8Y8 452 aa16.01■□□□□ 0.15
PHRF1-201ENST00000264555 RMI1Q9H9A7 625 aa16.01■□□□□ 0.15
PHRF1-201ENST00000264555 EXOSC1Q9Y3B2 195 aaKnown RBP16.01■□□□□ 0.15
PHRF1-201ENST00000264555 A8MUA0 341 aa16.01■□□□□ 0.15
PHRF1-201ENST00000264555 LSM1O15116 133 aaKnown RBP16.01■□□□□ 0.15
PHRF1-201ENST00000264555 AXIN1O15169 862 aa16.01■□□□□ 0.15
PHRF1-201ENST00000264555 IFI30P13284 250 aa16.01■□□□□ 0.15
PHRF1-201ENST00000264555 CRISP1P54107 249 aa16.01■□□□□ 0.15
PHRF1-201ENST00000264555 POU6F2P78424 691 aaPredicted RBP16.01■□□□□ 0.15
PHRF1-201ENST00000264555 PITPNAQ00169 270 aa16.01■□□□□ 0.15
PHRF1-201ENST00000264555 PIGFQ07326 219 aa16.01■□□□□ 0.15
PHRF1-201ENST00000264555 VEZF1Q14119 521 aa16.01■□□□□ 0.15
PHRF1-201ENST00000264555 TCEAL4Q96EI5 215 aa16.01■□□□□ 0.15
PHRF1-201ENST00000264555 ZNF597Q96LX8 424 aa16.01■□□□□ 0.15
PHRF1-201ENST00000264555 RPRD1BQ9NQG5 326 aaKnown RBP16.01■□□□□ 0.15
PHRF1-201ENST00000264555 MKLN1Q9UL63 735 aa16.01■□□□□ 0.15
PHRF1-201ENST00000264555 ZNF451Q9Y4E5 1061 aa16.01■□□□□ 0.15
PHRF1-201ENST00000264555 TCRBV21S2A2A0A5A6 115 aa16■□□□□ 0.15
PHRF1-201ENST00000264555 ITGBL1O95965 494 aaPredicted RBP16■□□□□ 0.15
PHRF1-201ENST00000264555 F11P03951 625 aa16■□□□□ 0.15
PHRF1-201ENST00000264555 MAP2K4P45985 399 aa16■□□□□ 0.15
PHRF1-201ENST00000264555 ZIC5Q96T25 663 aa16■□□□□ 0.15
PHRF1-201ENST00000264555 DCAF13Q9NV06 445 aaKnown RBP16■□□□□ 0.15
PHRF1-201ENST00000264555 HS3ST2Q9Y278 367 aa16■□□□□ 0.15
PHRF1-201ENST00000264555 OR6C74A6NCV1 312 aa16■□□□□ 0.15
PHRF1-201ENST00000264555 ORC5O43913 435 aa16■□□□□ 0.15
PHRF1-201ENST00000264555 GSTM2P28161 218 aa16■□□□□ 0.15
PHRF1-201ENST00000264555 OXTRP30559 389 aa16■□□□□ 0.15
PHRF1-201ENST00000264555 RPS26P62854 115 aaKnown RBP16■□□□□ 0.15
PHRF1-201ENST00000264555 IER5LQ5T953 404 aa16■□□□□ 0.15
PHRF1-201ENST00000264555 SERPINA11Q86U17 422 aa16■□□□□ 0.15
PHRF1-201ENST00000264555 TMIEQ8NEW7 156 aa16■□□□□ 0.15
PHRF1-201ENST00000264555 PDCD10Q9BUL8 212 aa16■□□□□ 0.15
PHRF1-201ENST00000264555 GDE1Q9NZC3 331 aa16■□□□□ 0.15
PHRF1-201ENST00000264555 MARK1Q9P0L2 795 aa16■□□□□ 0.15
PHRF1-201ENST00000264555 DLEC1Q9Y238 1755 aa16■□□□□ 0.15
PHRF1-201ENST00000264555 SLC1A7O00341 560 aa16■□□□□ 0.15
PHRF1-201ENST00000264555 PPP2R2BQ00005 443 aa16■□□□□ 0.15
PHRF1-201ENST00000264555 CBX3Q13185 183 aa16■□□□□ 0.15
PHRF1-201ENST00000264555 SLC27A4Q6P1M0 643 aa16■□□□□ 0.15
PHRF1-201ENST00000264555 PARS2Q7L3T8 475 aaKnown RBP16■□□□□ 0.15
PHRF1-201ENST00000264555 LRRC25Q8N386 305 aaPredicted RBP16■□□□□ 0.15
PHRF1-201ENST00000264555 SREK1IP1Q8N9Q2 155 aaPredicted RBP16■□□□□ 0.15
PHRF1-201ENST00000264555 BIRC8Q96P09 236 aa16■□□□□ 0.15
PHRF1-201ENST00000264555 FEVQ99581 238 aa16■□□□□ 0.15
PHRF1-201ENST00000264555 EPYCQ99645 322 aa16■□□□□ 0.15
PHRF1-201ENST00000264555 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16■□□□□ 0.15
PHRF1-201ENST00000264555 RIMS3Q9UJD0 308 aa16■□□□□ 0.15
PHRF1-201ENST00000264555 ANXA2P2A6NMY6 339 aa16■□□□□ 0.15
PHRF1-201ENST00000264555 CCRL2O00421 344 aa16■□□□□ 0.15
PHRF1-201ENST00000264555 RNASET2O00584 256 aaKnown RBP16■□□□□ 0.15
PHRF1-201ENST00000264555 FBP2O00757 339 aa16■□□□□ 0.15
PHRF1-201ENST00000264555 LILRB3O75022 631 aa16■□□□□ 0.15
PHRF1-201ENST00000264555 ABLIM3O94929 683 aa16■□□□□ 0.15
PHRF1-201ENST00000264555 LDOC1O95751 146 aaPredicted RBP16■□□□□ 0.15
PHRF1-201ENST00000264555 CD2P06729 351 aa16■□□□□ 0.15
PHRF1-201ENST00000264555 ANXA2P07355 339 aaKnown RBP16■□□□□ 0.15
PHRF1-201ENST00000264555 ZNF234Q14588 700 aa16■□□□□ 0.15
PHRF1-201ENST00000264555 DEFB134Q4QY38 66 aa16■□□□□ 0.15
PHRF1-201ENST00000264555 LCTLQ6UWM7 567 aa16■□□□□ 0.15
PHRF1-201ENST00000264555 SLC29A4Q7RTT9 530 aa16■□□□□ 0.15
PHRF1-201ENST00000264555 OR5AR1Q8NGP9 310 aa16■□□□□ 0.15
PHRF1-201ENST00000264555 NEIL2Q969S2 332 aa16■□□□□ 0.15
PHRF1-201ENST00000264555 EXO5Q9H790 373 aa16■□□□□ 0.15
PHRF1-201ENST00000264555 MT-ND2P03891 347 aa15.99■□□□□ 0.15
PHRF1-201ENST00000264555 SGSHP51688 502 aa15.99■□□□□ 0.15
PHRF1-201ENST00000264555 IST1P53990 364 aa15.99■□□□□ 0.15
PHRF1-201ENST00000264555 CPZQ66K79 652 aa15.99■□□□□ 0.15
PHRF1-201ENST00000264555 NAGSQ8N159 534 aa15.99■□□□□ 0.15
PHRF1-201ENST00000264555 OR8J1Q8NGP2 316 aa15.99■□□□□ 0.15
PHRF1-201ENST00000264555 MAL2Q969L2 176 aa15.99■□□□□ 0.15
PHRF1-201ENST00000264555 SLC22A4Q9H015 551 aa15.99■□□□□ 0.15
PHRF1-201ENST00000264555 MMP27Q9H306 513 aa15.99■□□□□ 0.15
PHRF1-201ENST00000264555 MALT1Q9UDY8 824 aa15.99■□□□□ 0.15
PHRF1-201ENST00000264555 RLN1P04808 185 aa15.99■□□□□ 0.15
PHRF1-201ENST00000264555 ACSL1P33121 698 aa15.99■□□□□ 0.15
PHRF1-201ENST00000264555 DCTP40126 519 aa15.99■□□□□ 0.15
PHRF1-201ENST00000264555 ENTPD1P49961 510 aa15.99■□□□□ 0.15
PHRF1-201ENST00000264555 DMPKQ09013 629 aa15.99■□□□□ 0.15
PHRF1-201ENST00000264555 PON3Q15166 354 aa15.99■□□□□ 0.15
PHRF1-201ENST00000264555 CLMPQ9H6B4 373 aa15.99■□□□□ 0.15
PHRF1-201ENST00000264555 ENTPD6O75354 484 aa15.99■□□□□ 0.15
PHRF1-201ENST00000264555 TRIM3O75382 744 aaPredicted RBP15.99■□□□□ 0.15
PHRF1-201ENST00000264555 CDRT1O95170 752 aa15.99■□□□□ 0.15
PHRF1-201ENST00000264555 IGLV3-25P01717 112 aa15.99■□□□□ 0.15
PHRF1-201ENST00000264555 IGFBP6P24592 240 aaPredicted RBP15.99■□□□□ 0.15
PHRF1-201ENST00000264555 SLC6A6P31641 620 aa15.99■□□□□ 0.15
PHRF1-201ENST00000264555 VSX2P58304 361 aaPredicted RBP15.99■□□□□ 0.15
PHRF1-201ENST00000264555 TAS2R38P59533 333 aa15.99■□□□□ 0.15
PHRF1-201ENST00000264555 RPS3AP61247 264 aaKnown RBP15.99■□□□□ 0.15
PHRF1-201ENST00000264555 TXNL4AP83876 142 aaKnown RBP15.99■□□□□ 0.15
PHRF1-201ENST00000264555 TMEM107Q6UX40 140 aa15.99■□□□□ 0.15
PHRF1-201ENST00000264555 GALNT10Q86SR1 603 aa15.99■□□□□ 0.15
PHRF1-201ENST00000264555 PDZD3Q86UT5 571 aa15.99■□□□□ 0.15
PHRF1-201ENST00000264555 ECHDC3Q96DC8 303 aa15.99■□□□□ 0.15
PHRF1-201ENST00000264555 HSPBAP1Q96EW2 488 aa15.99■□□□□ 0.15
PHRF1-201ENST00000264555 DMRT3Q9NQL9 472 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms