RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 NTRK1P04629 796 aa21.45■■□□□ 1.02
CDX1-201ENST00000231656 PPP1CAP62136 330 aa21.45■■□□□ 1.02
CDX1-201ENST00000231656 SLC36A3Q495N2 470 aa21.45■■□□□ 1.02
CDX1-201ENST00000231656 KLHL35Q6PF15 583 aa21.45■■□□□ 1.02
CDX1-201ENST00000231656 ZCCHC7Q8N3Z6 543 aaKnown RBP21.45■■□□□ 1.02
CDX1-201ENST00000231656 OR10Q1Q8NGQ4 319 aa21.45■■□□□ 1.02
CDX1-201ENST00000231656 OR4C6Q8NH72 309 aa21.45■■□□□ 1.02
CDX1-201ENST00000231656 MAGEE2Q8TD90 523 aaPredicted RBP21.45■■□□□ 1.02
CDX1-201ENST00000231656 SARGQ9BW04 601 aa21.45■■□□□ 1.02
CDX1-201ENST00000231656 DDX31Q9H8H2 851 aaKnown RBP21.45■■□□□ 1.02
CDX1-201ENST00000231656 TAS2R9Q9NYW1 312 aa21.45■■□□□ 1.02
CDX1-201ENST00000231656 LRIT2A6NDA9 550 aa21.44■■□□□ 1.02
CDX1-201ENST00000231656 HAT1O14929 419 aa21.44■■□□□ 1.02
CDX1-201ENST00000231656 TMPRSS11DO60235 418 aa21.44■■□□□ 1.02
CDX1-201ENST00000231656 SEMG1P04279 462 aa21.44■■□□□ 1.02
CDX1-201ENST00000231656 ALPPL2P10696 532 aa21.44■■□□□ 1.02
CDX1-201ENST00000231656 PCGF2P35227 344 aa21.44■■□□□ 1.02
CDX1-201ENST00000231656 GRK3P35626 688 aa21.44■■□□□ 1.02
CDX1-201ENST00000231656 GSTM5P46439 218 aa21.44■■□□□ 1.02
CDX1-201ENST00000231656 DAG1Q14118 895 aa21.44■■□□□ 1.02
CDX1-201ENST00000231656 SLC5A12Q1EHB4 618 aa21.44■■□□□ 1.02
CDX1-201ENST00000231656 ARMC6Q6NXE6 501 aa21.44■■□□□ 1.02
CDX1-201ENST00000231656 ISLR2Q6UXK2 745 aa21.44■■□□□ 1.02
CDX1-201ENST00000231656 TRIML2Q8N7C3 387 aa21.44■■□□□ 1.02
CDX1-201ENST00000231656 OR52N2Q8NGI0 321 aa21.44■■□□□ 1.02
CDX1-201ENST00000231656 RPS6KA6Q9UK32 745 aa21.44■■□□□ 1.02
CDX1-201ENST00000231656 RP1P56715 2156 aa21.44■■□□□ 1.02
CDX1-201ENST00000231656 TNFRSF21O75509 655 aa21.43■■□□□ 1.02
CDX1-201ENST00000231656 FKBP9O95302 570 aa21.43■■□□□ 1.02
CDX1-201ENST00000231656 ZNF682O95780 498 aa21.43■■□□□ 1.02
CDX1-201ENST00000231656 PROS1P07225 676 aa21.43■■□□□ 1.02
CDX1-201ENST00000231656 MYF5P13349 255 aa21.43■■□□□ 1.02
CDX1-201ENST00000231656 HOXB3P14651 431 aaPredicted RBP21.43■■□□□ 1.02
CDX1-201ENST00000231656 GLB1P16278 677 aa21.43■■□□□ 1.02
CDX1-201ENST00000231656 MAGP20916 626 aa21.43■■□□□ 1.02
CDX1-201ENST00000231656 MYF6P23409 242 aa21.43■■□□□ 1.02
CDX1-201ENST00000231656 GSTM2P28161 218 aa21.43■■□□□ 1.02
CDX1-201ENST00000231656 CAPZBP47756 277 aa21.43■■□□□ 1.02
CDX1-201ENST00000231656 ALDH3A2P51648 485 aa21.43■■□□□ 1.02
CDX1-201ENST00000231656 ARSFP54793 590 aa21.43■■□□□ 1.02
CDX1-201ENST00000231656 VAC14Q08AM6 782 aa21.43■■□□□ 1.02
CDX1-201ENST00000231656 HYAL2Q12891 473 aa21.43■■□□□ 1.02
CDX1-201ENST00000231656 TMEM35AQ53FP2 167 aa21.43■■□□□ 1.02
CDX1-201ENST00000231656 COX20Q5RI15 118 aa21.43■■□□□ 1.02
CDX1-201ENST00000231656 OR4C11Q6IEV9 310 aa21.43■■□□□ 1.02
CDX1-201ENST00000231656 TCEAL6Q6IPX3 200 aa21.43■■□□□ 1.02
CDX1-201ENST00000231656 CBLL1Q75N03 491 aa21.43■■□□□ 1.02
CDX1-201ENST00000231656 GALNT10Q86SR1 603 aa21.43■■□□□ 1.02
CDX1-201ENST00000231656 PAQR7Q86WK9 346 aa21.43■■□□□ 1.02
CDX1-201ENST00000231656 AMER3Q8N944 861 aa21.43■■□□□ 1.02
CDX1-201ENST00000231656 TCEAL3Q969E4 200 aa21.43■■□□□ 1.02
CDX1-201ENST00000231656 ZNF764Q96H86 408 aaPredicted RBP21.43■■□□□ 1.02
CDX1-201ENST00000231656 TEFMQ96QE5 360 aaKnown RBP21.43■■□□□ 1.02
CDX1-201ENST00000231656 GTPBP2Q9BX10 602 aaKnown RBP21.43■■□□□ 1.02
CDX1-201ENST00000231656 POMT2Q9UKY4 750 aa21.43■■□□□ 1.02
CDX1-201ENST00000231656 A0A0A6YYD5 115 aa21.43■■□□□ 1.02
CDX1-201ENST00000231656 TNFSF14O43557 240 aa21.43■■□□□ 1.02
CDX1-201ENST00000231656 SERPIND1P05546 499 aa21.43■■□□□ 1.02
CDX1-201ENST00000231656 AHRP35869 848 aa21.43■■□□□ 1.02
CDX1-201ENST00000231656 LSSP48449 732 aa21.43■■□□□ 1.02
CDX1-201ENST00000231656 IST1P53990 364 aa21.43■■□□□ 1.02
CDX1-201ENST00000231656 EPHA4P54764 986 aa21.43■■□□□ 1.02
CDX1-201ENST00000231656 HEPACAMQ14CZ8 416 aa21.43■■□□□ 1.02
CDX1-201ENST00000231656 ADPRMQ3LIE5 342 aa21.43■■□□□ 1.02
CDX1-201ENST00000231656 CYBRD1Q53TN4 286 aa21.43■■□□□ 1.02
CDX1-201ENST00000231656 OTUD3Q5T2D3 398 aaPredicted RBP21.43■■□□□ 1.02
CDX1-201ENST00000231656 EIF3MQ7L2H7 374 aaKnown RBP21.43■■□□□ 1.02
CDX1-201ENST00000231656 ABCG4Q9H172 646 aa21.43■■□□□ 1.02
CDX1-201ENST00000231656 KLHL31Q9H511 634 aa21.43■■□□□ 1.02
CDX1-201ENST00000231656 CXorf56Q9H5V9 222 aa21.43■■□□□ 1.02
CDX1-201ENST00000231656 PNPLA3Q9NST1 481 aa21.43■■□□□ 1.02
CDX1-201ENST00000231656 EVA1BQ9NVM1 165 aa21.43■■□□□ 1.02
CDX1-201ENST00000231656 ACSL6Q9UKU0 697 aa21.43■■□□□ 1.02
CDX1-201ENST00000231656 PADI4Q9UM07 663 aa21.43■■□□□ 1.02
CDX1-201ENST00000231656 MAGED1Q9Y5V3 778 aaPredicted RBP21.43■■□□□ 1.02
CDX1-201ENST00000231656 AP1M2Q9Y6Q5 423 aa21.43■■□□□ 1.02
CDX1-201ENST00000231656 SPEGQ15772 3267 aa21.42■■□□□ 1.02
CDX1-201ENST00000231656 A0A0J9YY10 115 aa21.42■■□□□ 1.02
CDX1-201ENST00000231656 G3V2T6 193 aa21.42■■□□□ 1.02
CDX1-201ENST00000231656 KHNYNO15037 678 aaKnown RBP21.42■■□□□ 1.02
CDX1-201ENST00000231656 ZW10O43264 779 aa21.42■■□□□ 1.02
CDX1-201ENST00000231656 HPRP00739 348 aa21.42■■□□□ 1.02
CDX1-201ENST00000231656 ALPLP05186 524 aa21.42■■□□□ 1.02
CDX1-201ENST00000231656 GNAO1P09471 354 aa21.42■■□□□ 1.02
CDX1-201ENST00000231656 ETFAP13804 333 aa21.42■■□□□ 1.02
CDX1-201ENST00000231656 ALDH4A1P30038 563 aa21.42■■□□□ 1.02
CDX1-201ENST00000231656 CRYBA2P53672 197 aa21.42■■□□□ 1.02
CDX1-201ENST00000231656 TRA2BP62995 288 aaKnown RBP21.42■■□□□ 1.02
CDX1-201ENST00000231656 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.42■■□□□ 1.02
CDX1-201ENST00000231656 PLA2G2CQ5R387 149 aa21.42■■□□□ 1.02
CDX1-201ENST00000231656 RNF220Q5VTB9 566 aa21.42■■□□□ 1.02
CDX1-201ENST00000231656 FOXB2Q5VYV0 432 aa21.42■■□□□ 1.02
CDX1-201ENST00000231656 FIGLAQ6QHK4 219 aa21.42■■□□□ 1.02
CDX1-201ENST00000231656 STK32CQ86UX6 486 aa21.42■■□□□ 1.02
CDX1-201ENST00000231656 SVOPLQ8N434 492 aa21.42■■□□□ 1.02
CDX1-201ENST00000231656 NATD1Q8N6N6 113 aa21.42■■□□□ 1.02
CDX1-201ENST00000231656 C11orf65Q8NCR3 313 aa21.42■■□□□ 1.02
CDX1-201ENST00000231656 MAL2Q969L2 176 aa21.42■■□□□ 1.02
CDX1-201ENST00000231656 EPS8L2Q9H6S3 715 aa21.42■■□□□ 1.02
CDX1-201ENST00000231656 SLAMF7Q9NQ25 335 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms