RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 BTNL2Q9UIR0 455 aa13.94□□□□□ -0.18
SHKBP1-211ENST00000595945 CROTQ9UKG9 612 aa13.94□□□□□ -0.18
SHKBP1-211ENST00000595945 FBXW2Q9UKT8 454 aa13.94□□□□□ -0.18
SHKBP1-211ENST00000595945 PCDHGA7Q9Y5G6 932 aa13.94□□□□□ -0.18
SHKBP1-211ENST00000595945 PCDHGA1Q9Y5H4 931 aa13.94□□□□□ -0.18
SHKBP1-211ENST00000595945 A0A096LPI6 279 aa13.93□□□□□ -0.18
SHKBP1-211ENST00000595945 PRSS51A0A1B0GVH4 220 aa13.93□□□□□ -0.18
SHKBP1-211ENST00000595945 C1orf226A1L170 272 aa13.93□□□□□ -0.18
SHKBP1-211ENST00000595945 ZNF860A6NHJ4 632 aa13.93□□□□□ -0.18
SHKBP1-211ENST00000595945 RNASET2O00584 256 aaKnown RBP13.93□□□□□ -0.18
SHKBP1-211ENST00000595945 ZNF749O43361 778 aa13.93□□□□□ -0.18
SHKBP1-211ENST00000595945 RFPL3O75679 317 aa13.93□□□□□ -0.18
SHKBP1-211ENST00000595945 CCKBRP32239 447 aa13.93□□□□□ -0.18
SHKBP1-211ENST00000595945 FRKP42685 505 aaPredicted RBP13.93□□□□□ -0.18
SHKBP1-211ENST00000595945 TRPC1P48995 793 aa13.93□□□□□ -0.18
SHKBP1-211ENST00000595945 RAB38P57729 211 aa13.93□□□□□ -0.18
SHKBP1-211ENST00000595945 PSME3P61289 254 aa13.93□□□□□ -0.18
SHKBP1-211ENST00000595945 KCNJ2P63252 427 aa13.93□□□□□ -0.18
SHKBP1-211ENST00000595945 E2F1Q01094 437 aa13.93□□□□□ -0.18
SHKBP1-211ENST00000595945 NFYCQ13952 458 aa13.93□□□□□ -0.18
SHKBP1-211ENST00000595945 C16orf72Q14CZ0 275 aa13.93□□□□□ -0.18
SHKBP1-211ENST00000595945 FAM214AQ32MH5 1076 aa13.93□□□□□ -0.18
SHKBP1-211ENST00000595945 PHF19Q5T6S3 580 aa13.93□□□□□ -0.18
SHKBP1-211ENST00000595945 ANXA8L1Q5VT79 327 aa13.93□□□□□ -0.18
SHKBP1-211ENST00000595945 CDCP2Q5VXM1 449 aa13.93□□□□□ -0.18
SHKBP1-211ENST00000595945 C18orf63Q68DL7 685 aa13.93□□□□□ -0.18
SHKBP1-211ENST00000595945 DHDDSQ86SQ9 333 aa13.93□□□□□ -0.18
SHKBP1-211ENST00000595945 GLRX5Q86SX6 157 aa13.93□□□□□ -0.18
SHKBP1-211ENST00000595945 DEFB107AQ8IZN7 70 aa13.93□□□□□ -0.18
SHKBP1-211ENST00000595945 DTWD1Q8N5C7 304 aa13.93□□□□□ -0.18
SHKBP1-211ENST00000595945 NATD1Q8N6N6 113 aa13.93□□□□□ -0.18
SHKBP1-211ENST00000595945 OR5T3Q8NGG3 340 aa13.93□□□□□ -0.18
SHKBP1-211ENST00000595945 OR9A4Q8NGU2 314 aa13.93□□□□□ -0.18
SHKBP1-211ENST00000595945 DNAJB8Q8NHS0 232 aa13.93□□□□□ -0.18
SHKBP1-211ENST00000595945 MIEF2Q96C03 454 aa13.93□□□□□ -0.18
SHKBP1-211ENST00000595945 LRRC58Q96CX6 371 aa13.93□□□□□ -0.18
SHKBP1-211ENST00000595945 ITCHQ96J02 903 aa13.93□□□□□ -0.18
SHKBP1-211ENST00000595945 RMND5AQ9H871 391 aa13.93□□□□□ -0.18
SHKBP1-211ENST00000595945 FANCEQ9HB96 536 aa13.93□□□□□ -0.18
SHKBP1-211ENST00000595945 MIEF1Q9NQG6 463 aa13.93□□□□□ -0.18
SHKBP1-211ENST00000595945 TOR4AQ9NXH8 423 aa13.93□□□□□ -0.18
SHKBP1-211ENST00000595945 MS4A12Q9NXJ0 267 aa13.93□□□□□ -0.18
SHKBP1-211ENST00000595945 SH3BP4Q9P0V3 963 aa13.93□□□□□ -0.18
SHKBP1-211ENST00000595945 SERTAD3Q9UJW9 196 aa13.93□□□□□ -0.18
SHKBP1-211ENST00000595945 ERVK-11Q9UQG0 969 aa13.93□□□□□ -0.18
SHKBP1-211ENST00000595945 A0A0A6YYC8 382 aaPredicted RBP13.92□□□□□ -0.18
SHKBP1-211ENST00000595945 CFAP73A6NFT4 308 aa13.92□□□□□ -0.18
SHKBP1-211ENST00000595945 I3L1I5 382 aaPredicted RBP13.92□□□□□ -0.18
SHKBP1-211ENST00000595945 SGK494L7N484 410 aa13.92□□□□□ -0.18
SHKBP1-211ENST00000595945 CYR61O00622 381 aa13.92□□□□□ -0.18
SHKBP1-211ENST00000595945 CHST10O43529 356 aa13.92□□□□□ -0.18
SHKBP1-211ENST00000595945 RDH16O75452 317 aa13.92□□□□□ -0.18
SHKBP1-211ENST00000595945 ERN1O75460 977 aaKnown RBP13.92□□□□□ -0.18
SHKBP1-211ENST00000595945 PRKRAO75569 313 aaKnown RBP13.92□□□□□ -0.18
SHKBP1-211ENST00000595945 NR2F6P10588 404 aa13.92□□□□□ -0.18
SHKBP1-211ENST00000595945 NQO1P15559 274 aaKnown RBP13.92□□□□□ -0.18
SHKBP1-211ENST00000595945 DDX5P17844 614 aaKnown RBP13.92□□□□□ -0.18
SHKBP1-211ENST00000595945 CPN2P22792 545 aa13.92□□□□□ -0.18
SHKBP1-211ENST00000595945 LIMK1P53667 647 aa13.92□□□□□ -0.18
SHKBP1-211ENST00000595945 PCBP4P57723 403 aaKnown RBP13.92□□□□□ -0.18
SHKBP1-211ENST00000595945 SKP1P63208 163 aa13.92□□□□□ -0.18
SHKBP1-211ENST00000595945 OLR1P78380 273 aa13.92□□□□□ -0.18
SHKBP1-211ENST00000595945 LRRC74AQ0VAA2 488 aa13.92□□□□□ -0.18
SHKBP1-211ENST00000595945 CEBPEQ15744 281 aa13.92□□□□□ -0.18
SHKBP1-211ENST00000595945 SLC48A1Q6P1K1 146 aa13.92□□□□□ -0.18
SHKBP1-211ENST00000595945 PRMT9Q6P2P2 845 aa13.92□□□□□ -0.18
SHKBP1-211ENST00000595945 PGM2L1Q6PCE3 622 aa13.92□□□□□ -0.18
SHKBP1-211ENST00000595945 RBM44Q6ZP01 1051 aaKnown RBP13.92□□□□□ -0.18
SHKBP1-211ENST00000595945 MSRB3Q8IXL7 192 aa13.92□□□□□ -0.18
SHKBP1-211ENST00000595945 KIAA2013Q8IYS2 634 aa13.92□□□□□ -0.18
SHKBP1-211ENST00000595945 SHISA5Q8N114 240 aa13.92□□□□□ -0.18
SHKBP1-211ENST00000595945 EFCAB3Q8N7B9 438 aa13.92□□□□□ -0.18
SHKBP1-211ENST00000595945 BMPERQ8N8U9 685 aa13.92□□□□□ -0.18
SHKBP1-211ENST00000595945 GOT1L1Q8NHS2 421 aaPredicted RBP13.92□□□□□ -0.18
SHKBP1-211ENST00000595945 CIDECQ96AQ7 238 aaPredicted RBP13.92□□□□□ -0.18
SHKBP1-211ENST00000595945 MVB12AQ96EY5 273 aa13.92□□□□□ -0.18
SHKBP1-211ENST00000595945 CSF3RQ99062 836 aa13.92□□□□□ -0.18
SHKBP1-211ENST00000595945 CGREF1Q99674 301 aa13.92□□□□□ -0.18
SHKBP1-211ENST00000595945 HOPXQ9BPY8 73 aaPredicted RBP13.92□□□□□ -0.18
SHKBP1-211ENST00000595945 INPP5KQ9BT40 448 aa13.92□□□□□ -0.18
SHKBP1-211ENST00000595945 TRIM4Q9C037 500 aa13.92□□□□□ -0.18
SHKBP1-211ENST00000595945 IRAK4Q9NWZ3 460 aa13.92□□□□□ -0.18
SHKBP1-211ENST00000595945 OCIAD1Q9NX40 245 aa13.92□□□□□ -0.18
SHKBP1-211ENST00000595945 ABCD2Q9UBJ2 740 aa13.92□□□□□ -0.18
SHKBP1-211ENST00000595945 PRPF19Q9UMS4 504 aaKnown RBP13.92□□□□□ -0.18
SHKBP1-211ENST00000595945 WASHC1A8K0Z3 465 aa13.91□□□□□ -0.18
SHKBP1-211ENST00000595945 H0YIG0 161 aa13.91□□□□□ -0.18
SHKBP1-211ENST00000595945 DSCR3O14972 297 aa13.91□□□□□ -0.18
SHKBP1-211ENST00000595945 PGRMC2O15173 223 aa13.91□□□□□ -0.18
SHKBP1-211ENST00000595945 HYAL3O43820 417 aaPredicted RBP13.91□□□□□ -0.18
SHKBP1-211ENST00000595945 DKK1O94907 266 aa13.91□□□□□ -0.18
SHKBP1-211ENST00000595945 KCNH1O95259 989 aa13.91□□□□□ -0.18
SHKBP1-211ENST00000595945 SLC6A2P23975 617 aa13.91□□□□□ -0.18
SHKBP1-211ENST00000595945 PGM1P36871 562 aa13.91□□□□□ -0.18
SHKBP1-211ENST00000595945 BUD31P41223 144 aaPredicted RBP13.91□□□□□ -0.18
SHKBP1-211ENST00000595945 CDKN2CP42773 168 aa13.91□□□□□ -0.18
SHKBP1-211ENST00000595945 AVPR1BP47901 424 aa13.91□□□□□ -0.18
SHKBP1-211ENST00000595945 ALDH9A1P49189 494 aa13.91□□□□□ -0.18
SHKBP1-211ENST00000595945 ARSFP54793 590 aa13.91□□□□□ -0.18
SHKBP1-211ENST00000595945 CORO7P57737 925 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms