RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 GABRR3A8MPY1 467 aa20.84■□□□□ 0.93
GTF2F1-204ENST00000594965 PPP6CO00743 305 aa20.84■□□□□ 0.93
GTF2F1-204ENST00000594965 CCNG1P51959 295 aa20.84■□□□□ 0.93
GTF2F1-204ENST00000594965 ARFIP1P53367 373 aa20.84■□□□□ 0.93
GTF2F1-204ENST00000594965 SLAMF1Q13291 335 aa20.84■□□□□ 0.93
GTF2F1-204ENST00000594965 RCN2Q14257 317 aa20.84■□□□□ 0.93
GTF2F1-204ENST00000594965 INAQ16352 499 aa20.84■□□□□ 0.93
GTF2F1-204ENST00000594965 FAM180AQ6UWF9 173 aa20.84■□□□□ 0.93
GTF2F1-204ENST00000594965 ARMC10Q8N2F6 343 aa20.84■□□□□ 0.93
GTF2F1-204ENST00000594965 ZNF483Q8TF39 744 aaPredicted RBP20.84■□□□□ 0.93
GTF2F1-204ENST00000594965 ATP6V1E2Q96A05 226 aa20.84■□□□□ 0.93
GTF2F1-204ENST00000594965 REPS1Q96D71 796 aa20.84■□□□□ 0.93
GTF2F1-204ENST00000594965 C1QTNF3Q9BXJ4 246 aa20.84■□□□□ 0.93
GTF2F1-204ENST00000594965 ADAP2Q9NPF8 381 aa20.84■□□□□ 0.93
GTF2F1-204ENST00000594965 SEMA4BQ9NPR2 832 aaPredicted RBP20.84■□□□□ 0.93
GTF2F1-204ENST00000594965 PSD3Q9NYI0 1048 aa20.84■□□□□ 0.93
GTF2F1-204ENST00000594965 PSMC3IPQ9P2W1 217 aaPredicted RBP20.84■□□□□ 0.93
GTF2F1-204ENST00000594965 RP1L1Q8IWN7 2480 aaPredicted RBP20.83■□□□□ 0.93
GTF2F1-204ENST00000594965 LDB3O75112 727 aa20.83■□□□□ 0.93
GTF2F1-204ENST00000594965 SHBGP04278 402 aa20.83■□□□□ 0.93
GTF2F1-204ENST00000594965 EDN3P14138 238 aa20.83■□□□□ 0.93
GTF2F1-204ENST00000594965 CPN2P22792 545 aa20.83■□□□□ 0.93
GTF2F1-204ENST00000594965 PTX3P26022 381 aaPredicted RBP20.83■□□□□ 0.93
GTF2F1-204ENST00000594965 TNFRSF8P28908 595 aa20.83■□□□□ 0.93
GTF2F1-204ENST00000594965 TPP2P29144 1249 aaPredicted RBP20.83■□□□□ 0.93
GTF2F1-204ENST00000594965 BSGP35613 385 aa20.83■□□□□ 0.93
GTF2F1-204ENST00000594965 MLF1P58340 268 aa20.83■□□□□ 0.93
GTF2F1-204ENST00000594965 CUL3Q13618 768 aa20.83■□□□□ 0.93
GTF2F1-204ENST00000594965 OR1C1Q15619 314 aa20.83■□□□□ 0.93
GTF2F1-204ENST00000594965 ZNF766Q5HY98 468 aa20.83■□□□□ 0.93
GTF2F1-204ENST00000594965 FAM219BQ5XKK7 198 aa20.83■□□□□ 0.93
GTF2F1-204ENST00000594965 SPINK14Q6IE38 97 aa20.83■□□□□ 0.93
GTF2F1-204ENST00000594965 ZCCHC7Q8N3Z6 543 aaKnown RBP20.83■□□□□ 0.93
GTF2F1-204ENST00000594965 BCORP1Q8N888 145 aa20.83■□□□□ 0.93
GTF2F1-204ENST00000594965 NCLNQ969V3 563 aa20.83■□□□□ 0.93
GTF2F1-204ENST00000594965 ANKRD9Q96BM1 317 aaPredicted RBP20.83■□□□□ 0.93
GTF2F1-204ENST00000594965 UTP23Q9BRU9 249 aaKnown RBP20.83■□□□□ 0.93
GTF2F1-204ENST00000594965 HES7Q9BYE0 225 aa20.83■□□□□ 0.93
GTF2F1-204ENST00000594965 ALOXE3Q9BYJ1 711 aa20.83■□□□□ 0.93
GTF2F1-204ENST00000594965 OLAHQ9NV23 265 aa20.83■□□□□ 0.93
GTF2F1-204ENST00000594965 ABI3Q9P2A4 366 aa20.83■□□□□ 0.93
GTF2F1-204ENST00000594965 VTI1BQ9UEU0 232 aa20.83■□□□□ 0.93
GTF2F1-204ENST00000594965 PPT2Q9UMR5 302 aa20.83■□□□□ 0.93
GTF2F1-204ENST00000594965 GOLGA8RI6L899 631 aa20.82■□□□□ 0.92
GTF2F1-204ENST00000594965 FOXE1O00358 373 aaPredicted RBP20.82■□□□□ 0.92
GTF2F1-204ENST00000594965 EEDO75530 441 aaKnown RBP20.82■□□□□ 0.92
GTF2F1-204ENST00000594965 RNF224P0DH78 156 aa20.82■□□□□ 0.92
GTF2F1-204ENST00000594965 CLCN2P51788 898 aa20.82■□□□□ 0.92
GTF2F1-204ENST00000594965 TDGF1P3P51864 188 aa20.82■□□□□ 0.92
GTF2F1-204ENST00000594965 RAP1GDS1P52306 607 aa20.82■□□□□ 0.92
GTF2F1-204ENST00000594965 CDH13P55290 713 aa20.82■□□□□ 0.92
GTF2F1-204ENST00000594965 HNRNPH2P55795 449 aaKnown RBP20.82■□□□□ 0.92
GTF2F1-204ENST00000594965 PHEXP78562 749 aa20.82■□□□□ 0.92
GTF2F1-204ENST00000594965 SRSF11Q05519 484 aaKnown RBP20.82■□□□□ 0.92
GTF2F1-204ENST00000594965 GGTA1PQ4G0N0 100 aa20.82■□□□□ 0.92
GTF2F1-204ENST00000594965 MRM1Q6IN84 353 aaKnown RBP20.82■□□□□ 0.92
GTF2F1-204ENST00000594965 OR4F6Q8NGB9 312 aa20.82■□□□□ 0.92
GTF2F1-204ENST00000594965 SUN3Q8TAQ9 357 aa20.82■□□□□ 0.92
GTF2F1-204ENST00000594965 MTFMTQ96DP5 389 aaKnown RBP20.82■□□□□ 0.92
GTF2F1-204ENST00000594965 VMP1Q96GC9 406 aa20.82■□□□□ 0.92
GTF2F1-204ENST00000594965 SCMH1Q96GD3 660 aa20.82■□□□□ 0.92
GTF2F1-204ENST00000594965 DEFB126Q9BYW3 111 aa20.82■□□□□ 0.92
GTF2F1-204ENST00000594965 ANKZF1Q9H8Y5 726 aa20.82■□□□□ 0.92
GTF2F1-204ENST00000594965 TBK1Q9UHD2 729 aa20.82■□□□□ 0.92
GTF2F1-204ENST00000594965 ZNF225Q9UK10 706 aa20.82■□□□□ 0.92
GTF2F1-204ENST00000594965 PCDHGB6Q9Y5F9 930 aa20.82■□□□□ 0.92
GTF2F1-204ENST00000594965 A0A0A6YYD5 115 aa20.81■□□□□ 0.92
GTF2F1-204ENST00000594965 TRBV11-1A0A0K0K1C0 115 aa20.81■□□□□ 0.92
GTF2F1-204ENST00000594965 FOXO6A8MYZ6 492 aa20.81■□□□□ 0.92
GTF2F1-204ENST00000594965 PRKNO60260 465 aaPredicted RBP20.81■□□□□ 0.92
GTF2F1-204ENST00000594965 DLX3O60479 287 aa20.81■□□□□ 0.92
GTF2F1-204ENST00000594965 NEURL1O76050 574 aa20.81■□□□□ 0.92
GTF2F1-204ENST00000594965 TSPAN8P19075 237 aa20.81■□□□□ 0.92
GTF2F1-204ENST00000594965 ARL1P40616 181 aaPredicted RBP20.81■□□□□ 0.92
GTF2F1-204ENST00000594965 IGLV3-21P80748 117 aaPredicted RBP20.81■□□□□ 0.92
GTF2F1-204ENST00000594965 PMP22Q01453 160 aa20.81■□□□□ 0.92
GTF2F1-204ENST00000594965 ID2Q02363 134 aa20.81■□□□□ 0.92
GTF2F1-204ENST00000594965 ELAVL1Q15717 326 aaKnown RBP20.81■□□□□ 0.92
GTF2F1-204ENST00000594965 C18orf63Q68DL7 685 aa20.81■□□□□ 0.92
GTF2F1-204ENST00000594965 MILR1Q7Z6M3 343 aa20.81■□□□□ 0.92
GTF2F1-204ENST00000594965 LCA5Q86VQ0 697 aa20.81■□□□□ 0.92
GTF2F1-204ENST00000594965 ZNF227Q86WZ6 799 aa20.81■□□□□ 0.92
GTF2F1-204ENST00000594965 ACMSDQ8TDX5 336 aa20.81■□□□□ 0.92
GTF2F1-204ENST00000594965 PTPMT1Q8WUK0 201 aaPredicted RBP20.81■□□□□ 0.92
GTF2F1-204ENST00000594965 PSMG3-AS1Q96PY0 264 aa20.81■□□□□ 0.92
GTF2F1-204ENST00000594965 CENPKQ9BS16 269 aa20.81■□□□□ 0.92
GTF2F1-204ENST00000594965 DDX31Q9H8H2 851 aaKnown RBP20.81■□□□□ 0.92
GTF2F1-204ENST00000594965 ATG4BQ9Y4P1 393 aa20.81■□□□□ 0.92
GTF2F1-204ENST00000594965 SPACA6W5XKT8 324 aa20.81■□□□□ 0.92
GTF2F1-204ENST00000594965 USP9XQ93008 2570 aaPredicted RBP20.8■□□□□ 0.92
GTF2F1-204ENST00000594965 EML6Q6ZMW3 1958 aa20.8■□□□□ 0.92
GTF2F1-204ENST00000594965 A0A1W2PPM1 405 aa20.8■□□□□ 0.92
GTF2F1-204ENST00000594965 BLACEA4D250 179 aa20.8■□□□□ 0.92
GTF2F1-204ENST00000594965 TMEM200CA6NKL6 621 aa20.8■□□□□ 0.92
GTF2F1-204ENST00000594965 CDK2AP1O14519 115 aa20.8■□□□□ 0.92
GTF2F1-204ENST00000594965 TMPRSS11DO60235 418 aa20.8■□□□□ 0.92
GTF2F1-204ENST00000594965 FGF17O60258 216 aa20.8■□□□□ 0.92
GTF2F1-204ENST00000594965 PRKRAO75569 313 aaKnown RBP20.8■□□□□ 0.92
GTF2F1-204ENST00000594965 AGFG2O95081 481 aa20.8■□□□□ 0.92
GTF2F1-204ENST00000594965 RASAL1O95294 804 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms