RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 KIAA1324LA8MWY0 1029 aaPredicted RBP16.06■□□□□ 0.16
RETREG3-210ENST00000590541 G3V3Y1 287 aa16.06■□□□□ 0.16
RETREG3-210ENST00000590541 SYT5O00445 386 aa16.06■□□□□ 0.16
RETREG3-210ENST00000590541 AQP7O14520 342 aa16.06■□□□□ 0.16
RETREG3-210ENST00000590541 OR1F1O43749 312 aa16.06■□□□□ 0.16
RETREG3-210ENST00000590541 WDR1O75083 606 aa16.06■□□□□ 0.16
RETREG3-210ENST00000590541 ADSLP30566 484 aaPredicted RBP16.06■□□□□ 0.16
RETREG3-210ENST00000590541 PEX19P40855 299 aa16.06■□□□□ 0.16
RETREG3-210ENST00000590541 MAGEA5P43359 124 aa16.06■□□□□ 0.16
RETREG3-210ENST00000590541 HNMTP50135 292 aa16.06■□□□□ 0.16
RETREG3-210ENST00000590541 SLC12A2P55011 1212 aa16.06■□□□□ 0.16
RETREG3-210ENST00000590541 POU4F1Q01851 419 aa16.06■□□□□ 0.16
RETREG3-210ENST00000590541 FASTKD3Q14CZ7 662 aaKnown RBP16.06■□□□□ 0.16
RETREG3-210ENST00000590541 TERF2Q15554 542 aa16.06■□□□□ 0.16
RETREG3-210ENST00000590541 FLYWCH1Q4VC44 716 aa16.06■□□□□ 0.16
RETREG3-210ENST00000590541 C1orf185Q5T7R7 199 aa16.06■□□□□ 0.16
RETREG3-210ENST00000590541 SBSNQ6UWP8 590 aa16.06■□□□□ 0.16
RETREG3-210ENST00000590541 IL20RBQ6UXL0 311 aa16.06■□□□□ 0.16
RETREG3-210ENST00000590541 CLEC9AQ6UXN8 241 aa16.06■□□□□ 0.16
RETREG3-210ENST00000590541 ABHD13Q7L211 337 aa16.06■□□□□ 0.16
RETREG3-210ENST00000590541 KRTAP1-3Q8IUG1 177 aa16.06■□□□□ 0.16
RETREG3-210ENST00000590541 GPALPP1Q8IXQ4 340 aa16.06■□□□□ 0.16
RETREG3-210ENST00000590541 TMEM251Q8N6I4 163 aa16.06■□□□□ 0.16
RETREG3-210ENST00000590541 NT5CQ8TCD5 201 aa16.06■□□□□ 0.16
RETREG3-210ENST00000590541 UTP15Q8TED0 518 aaKnown RBP16.06■□□□□ 0.16
RETREG3-210ENST00000590541 NCLNQ969V3 563 aa16.06■□□□□ 0.16
RETREG3-210ENST00000590541 TSPAN17Q96FV3 270 aa16.06■□□□□ 0.16
RETREG3-210ENST00000590541 VMP1Q96GC9 406 aa16.06■□□□□ 0.16
RETREG3-210ENST00000590541 TXNDC16Q9P2K2 825 aa16.06■□□□□ 0.16
RETREG3-210ENST00000590541 PSAT1Q9Y617 370 aa16.06■□□□□ 0.16
RETREG3-210ENST00000590541 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.06■□□□□ 0.16
RETREG3-210ENST00000590541 CTAGE15A4D2H0 777 aa16.05■□□□□ 0.16
RETREG3-210ENST00000590541 RAD51CO43502 376 aa16.05■□□□□ 0.16
RETREG3-210ENST00000590541 OR2J2O76002 312 aa16.05■□□□□ 0.16
RETREG3-210ENST00000590541 OR6B1O95007 311 aa16.05■□□□□ 0.16
RETREG3-210ENST00000590541 SERPIND1P05546 499 aa16.05■□□□□ 0.16
RETREG3-210ENST00000590541 CELA3AP09093 270 aa16.05■□□□□ 0.16
RETREG3-210ENST00000590541 RNH1P13489 461 aaKnown RBP16.05■□□□□ 0.16
RETREG3-210ENST00000590541 UQCRC1P31930 480 aa16.05■□□□□ 0.16
RETREG3-210ENST00000590541 CSHL1Q14406 222 aa16.05■□□□□ 0.16
RETREG3-210ENST00000590541 PPP1R3AQ16821 1122 aa16.05■□□□□ 0.16
RETREG3-210ENST00000590541 RIPPLY2Q5TAB7 128 aa16.05■□□□□ 0.16
RETREG3-210ENST00000590541 NDUFAF5Q5TEU4 345 aa16.05■□□□□ 0.16
RETREG3-210ENST00000590541 ADAMTSL2Q86TH1 951 aa16.05■□□□□ 0.16
RETREG3-210ENST00000590541 CTAGE6Q86UF2 777 aa16.05■□□□□ 0.16
RETREG3-210ENST00000590541 FAM109AQ8N4B1 249 aa16.05■□□□□ 0.16
RETREG3-210ENST00000590541 ARMC2Q8NEN0 867 aa16.05■□□□□ 0.16
RETREG3-210ENST00000590541 FAM222BQ8WU58 562 aa16.05■□□□□ 0.16
RETREG3-210ENST00000590541 MCMBPQ9BTE3 642 aa16.05■□□□□ 0.16
RETREG3-210ENST00000590541 CNPPD1Q9BV87 410 aa16.05■□□□□ 0.16
RETREG3-210ENST00000590541 DPH5Q9H2P9 285 aa16.05■□□□□ 0.16
RETREG3-210ENST00000590541 SPNS1Q9H2V7 528 aa16.05■□□□□ 0.16
RETREG3-210ENST00000590541 RHBGQ9H310 441 aa16.05■□□□□ 0.16
RETREG3-210ENST00000590541 CLK4Q9HAZ1 481 aaKnown RBP16.05■□□□□ 0.16
RETREG3-210ENST00000590541 ACAD8Q9UKU7 415 aa16.05■□□□□ 0.16
RETREG3-210ENST00000590541 CLDN16Q9Y5I7 305 aa16.05■□□□□ 0.16
RETREG3-210ENST00000590541 TRBC2A0A5B9 178 aa16.04■□□□□ 0.16
RETREG3-210ENST00000590541 C4orf51C9J302 202 aa16.04■□□□□ 0.16
RETREG3-210ENST00000590541 PSMD12O00232 456 aaPredicted RBP16.04■□□□□ 0.16
RETREG3-210ENST00000590541 SUSD5O60279 629 aa16.04■□□□□ 0.16
RETREG3-210ENST00000590541 ZFAND5O76080 213 aa16.04■□□□□ 0.16
RETREG3-210ENST00000590541 GUCA1CO95843 209 aa16.04■□□□□ 0.16
RETREG3-210ENST00000590541 HEXAP06865 529 aa16.04■□□□□ 0.16
RETREG3-210ENST00000590541 SMIM10L1P0DMW3 83 aa16.04■□□□□ 0.16
RETREG3-210ENST00000590541 CNR1P21554 472 aa16.04■□□□□ 0.16
RETREG3-210ENST00000590541 PPP2R1BP30154 601 aa16.04■□□□□ 0.16
RETREG3-210ENST00000590541 SOX3P41225 446 aa16.04■□□□□ 0.16
RETREG3-210ENST00000590541 RAB8AP61006 207 aa16.04■□□□□ 0.16
RETREG3-210ENST00000590541 RGS1Q08116 209 aa16.04■□□□□ 0.16
RETREG3-210ENST00000590541 KEAP1Q14145 624 aa16.04■□□□□ 0.16
RETREG3-210ENST00000590541 DAZAP2Q15038 168 aaPredicted RBP16.04■□□□□ 0.16
RETREG3-210ENST00000590541 ZNF750Q32MQ0 723 aa16.04■□□□□ 0.16
RETREG3-210ENST00000590541 GK5Q6ZS86 529 aa16.04■□□□□ 0.16
RETREG3-210ENST00000590541 ZNF572Q7Z3I7 529 aaPredicted RBP16.04■□□□□ 0.16
RETREG3-210ENST00000590541 SCUBE1Q8IWY4 988 aa16.04■□□□□ 0.16
RETREG3-210ENST00000590541 CA13Q8N1Q1 262 aa16.04■□□□□ 0.16
RETREG3-210ENST00000590541 RELL2Q8NC24 303 aaPredicted RBP16.04■□□□□ 0.16
RETREG3-210ENST00000590541 ASB15Q8WXK1 588 aa16.04■□□□□ 0.16
RETREG3-210ENST00000590541 PYCR2Q96C36 320 aa16.04■□□□□ 0.16
RETREG3-210ENST00000590541 SMIM10Q96HG1 83 aa16.04■□□□□ 0.16
RETREG3-210ENST00000590541 CPNE1Q99829 537 aa16.04■□□□□ 0.16
RETREG3-210ENST00000590541 SH3GL2Q99962 352 aa16.04■□□□□ 0.16
RETREG3-210ENST00000590541 IL1RL2Q9HB29 575 aa16.04■□□□□ 0.16
RETREG3-210ENST00000590541 SAYSD1Q9NPB0 183 aa16.04■□□□□ 0.16
RETREG3-210ENST00000590541 PNO1Q9NRX1 252 aaKnown RBP16.04■□□□□ 0.16
RETREG3-210ENST00000590541 B4GALT7Q9UBV7 327 aa16.04■□□□□ 0.16
RETREG3-210ENST00000590541 ZFP69BQ9UJL9 534 aa16.04■□□□□ 0.16
RETREG3-210ENST00000590541 DYRK1BQ9Y463 629 aa16.04■□□□□ 0.16
RETREG3-210ENST00000590541 MMACHCQ9Y4U1 282 aa16.04■□□□□ 0.16
RETREG3-210ENST00000590541 OARD1Q9Y530 152 aa16.04■□□□□ 0.16
RETREG3-210ENST00000590541 KCNE2Q9Y6J6 123 aa16.04■□□□□ 0.16
RETREG3-210ENST00000590541 URADA6NGE7 173 aa16.03■□□□□ 0.16
RETREG3-210ENST00000590541 TGFBR3LH3BV60 316 aa16.03■□□□□ 0.16
RETREG3-210ENST00000590541 ENDOUP21128 410 aaKnown RBP16.03■□□□□ 0.16
RETREG3-210ENST00000590541 SAT1P21673 171 aa16.03■□□□□ 0.16
RETREG3-210ENST00000590541 AHRP35869 848 aa16.03■□□□□ 0.16
RETREG3-210ENST00000590541 HNF4AP41235 474 aa16.03■□□□□ 0.16
RETREG3-210ENST00000590541 SCTRP47872 440 aa16.03■□□□□ 0.16
RETREG3-210ENST00000590541 MAN2A2P49641 1150 aa16.03■□□□□ 0.16
RETREG3-210ENST00000590541 TAS2R39P59534 338 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms