RNA–Protein interactions for RNA: ENST00000557768.1

HNRNPC-233, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 3

Gene HNRNPC, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-233	ENST00000557768	SSR1	P43307	286 aa	Known RBP	5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	CAPZB	P47756	277 aa		5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	CLCNKA	P51800	687 aa		5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	RPL26	P61254	145 aa	Known RBP	5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	RPS15	P62841	145 aa	Known RBP	5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	TXNL4A	P83876	142 aa	Known RBP	5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	MYL5	Q02045	173 aa		5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	SLC25A11	Q02978	314 aa	Known RBP	5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	LAMB3	Q13751	1172 aa		5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	PAFAH1B3	Q15102	231 aa	Known RBP	5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	MED22	Q15528	200 aa		5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	SLC9B1	Q4ZJI4	515 aa		5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	SH2D4B	Q5SQS7	431 aa		5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	CCDC122	Q5T0U0	273 aa		5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	ABHD17B	Q5VST6	288 aa		5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	NCBP2-AS2	Q69YL0	99 aa		5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	ARMC6	Q6NXE6	501 aa		5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	PPP1R2P3	Q6NXS1	205 aa		5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	ABRAXAS1	Q6UWZ7	409 aa		5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	KRT74	Q7RTS7	529 aa		5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	PRSS42	Q7Z5A4	293 aa		5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	ZNF547	Q8IVP9	402 aa		5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	SIRT6	Q8N6T7	355 aa		5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	SIDT2	Q8NBJ9	832 aa	Known RBP	5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	TOR1AIP2	Q8NFQ8	470 aa		5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	TEKT4	Q8WW24	435 aa		5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	GLMP	Q8WWB7	406 aa		5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	MR1	Q95460	341 aa		5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	GLYATL1	Q969I3	302 aa		5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	CTHRC1	Q96CG8	243 aa		5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	CXorf40B	Q96DE9	158 aa		5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	C19orf60	Q96EN9	201 aa		5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	SLC41A2	Q96JW4	573 aa		5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	PRR25	Q96S07	402 aa		5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	LYSMD1	Q96S90	227 aa		5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	NPAS1	Q99742	590 aa		5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	PIP5K1A	Q99755	562 aa		5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	MLPH	Q9BV36	600 aa	Predicted RBP	5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	ELOVL1	Q9BW60	279 aa		5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	ING2	Q9H160	280 aa		5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	HSD3B7	Q9H2F3	369 aa		5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	CDCP1	Q9H5V8	836 aa		5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	MRPL47	Q9HD33	250 aa	Known RBP	5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	PDE7B	Q9NP56	450 aa		5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	SLC40A1	Q9NP59	571 aa		5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	MLXIPL	Q9NP71	852 aa		5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	FGF21	Q9NSA1	209 aa		5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	POT1	Q9NUX5	634 aa		5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	MRGBP	Q9NV56	204 aa		5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	SYBU	Q9NX95	663 aa		5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	RARRES3	Q9UL19	164 aa		5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	RPL26L1	Q9UNX3	145 aa	Known RBP	5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	WDR37	Q9Y2I8	494 aa		5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	KCNE2	Q9Y6J6	123 aa		5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	SVIL	O95425	2214 aa		5.21	□□□□□ -1.58
HNRNPC-233	ENST00000557768	ABCA12	Q86UK0	2595 aa		5.2	□□□□□ -1.58
HNRNPC-233	ENST00000557768	TEX13C	A0A0J9YWL9	993 aa		5.2	□□□□□ -1.58
HNRNPC-233	ENST00000557768	RGSL1	A5PLK6	1076 aa		5.2	□□□□□ -1.58
HNRNPC-233	ENST00000557768	KCNK1	O00180	336 aa		5.2	□□□□□ -1.58
HNRNPC-233	ENST00000557768	HNRNPCL1	O60812	293 aa	Known RBP	5.2	□□□□□ -1.58
HNRNPC-233	ENST00000557768	SCRG1	O75711	98 aa		5.2	□□□□□ -1.58
HNRNPC-233	ENST00000557768	CDK14	O94921	469 aa		5.2	□□□□□ -1.58
HNRNPC-233	ENST00000557768	DDAH2	O95865	285 aa		5.2	□□□□□ -1.58
HNRNPC-233	ENST00000557768	JCHAIN	P01591	159 aa		5.2	□□□□□ -1.58
HNRNPC-233	ENST00000557768	IL6R	P08887	468 aa	Predicted RBP	5.2	□□□□□ -1.58
HNRNPC-233	ENST00000557768	MYBL1	P10243	752 aa		5.2	□□□□□ -1.58
HNRNPC-233	ENST00000557768	GZMA	P12544	262 aa		5.2	□□□□□ -1.58
HNRNPC-233	ENST00000557768	IDS	P22304	550 aa		5.2	□□□□□ -1.58
HNRNPC-233	ENST00000557768	CCNC	P24863	283 aa		5.2	□□□□□ -1.58
HNRNPC-233	ENST00000557768	ARCN1	P48444	511 aa	Known RBP	5.2	□□□□□ -1.58
HNRNPC-233	ENST00000557768	ARSE	P51690	589 aa		5.2	□□□□□ -1.58
HNRNPC-233	ENST00000557768	RPS6KA3	P51812	740 aa		5.2	□□□□□ -1.58
HNRNPC-233	ENST00000557768	MVD	P53602	400 aa		5.2	□□□□□ -1.58
HNRNPC-233	ENST00000557768	EIF3B	P55884	814 aa	Known RBP	5.2	□□□□□ -1.58
HNRNPC-233	ENST00000557768	NANOS3	P60323	173 aa	Known RBP	5.2	□□□□□ -1.58
HNRNPC-233	ENST00000557768	PDE1B	Q01064	536 aa		5.2	□□□□□ -1.58
HNRNPC-233	ENST00000557768	GBE1	Q04446	702 aa		5.2	□□□□□ -1.58
HNRNPC-233	ENST00000557768	SLC10A2	Q12908	348 aa	Predicted RBP	5.2	□□□□□ -1.58
HNRNPC-233	ENST00000557768	EPS8	Q12929	822 aa		5.2	□□□□□ -1.58
HNRNPC-233	ENST00000557768	CDC16	Q13042	620 aa		5.2	□□□□□ -1.58
HNRNPC-233	ENST00000557768	GPS2	Q13227	327 aa		5.2	□□□□□ -1.58
HNRNPC-233	ENST00000557768	RAPSN	Q13702	412 aa		5.2	□□□□□ -1.58
HNRNPC-233	ENST00000557768	DPYSL3	Q14195	570 aa		5.2	□□□□□ -1.58
HNRNPC-233	ENST00000557768	PIGH	Q14442	188 aa	Predicted RBP	5.2	□□□□□ -1.58
HNRNPC-233	ENST00000557768	CHRNA6	Q15825	494 aa		5.2	□□□□□ -1.58
HNRNPC-233	ENST00000557768	DNTTIP2	Q5QJE6	756 aa	Known RBP	5.2	□□□□□ -1.58
HNRNPC-233	ENST00000557768	TEDDM1	Q5T9Z0	273 aa		5.2	□□□□□ -1.58
HNRNPC-233	ENST00000557768	PAPD7	Q5XG87	772 aa	Known RBP	5.2	□□□□□ -1.58
HNRNPC-233	ENST00000557768	LCN10	Q6JVE6	187 aa		5.2	□□□□□ -1.58
HNRNPC-233	ENST00000557768	RRM2B	Q7LG56	351 aa		5.2	□□□□□ -1.58
HNRNPC-233	ENST00000557768	SYVN1	Q86TM6	617 aa		5.2	□□□□□ -1.58
HNRNPC-233	ENST00000557768	TRAPPC5	Q8IUR0	188 aa		5.2	□□□□□ -1.58
HNRNPC-233	ENST00000557768	TMEM126B	Q8IUX1	230 aa		5.2	□□□□□ -1.58
HNRNPC-233	ENST00000557768	LRRC49	Q8IUZ0	686 aa		5.2	□□□□□ -1.58
HNRNPC-233	ENST00000557768	SRRM1	Q8IYB3	904 aa	Known RBP	5.2	□□□□□ -1.58
HNRNPC-233	ENST00000557768	TRAM1L1	Q8N609	369 aa		5.2	□□□□□ -1.58
HNRNPC-233	ENST00000557768	NKAIN3	Q8N8D7	197 aa		5.2	□□□□□ -1.58
HNRNPC-233	ENST00000557768	SLC38A9	Q8NBW4	561 aa		5.2	□□□□□ -1.58
HNRNPC-233	ENST00000557768	CCNY	Q8ND76	341 aa		5.2	□□□□□ -1.58
HNRNPC-233	ENST00000557768	FDCSP	Q8NFU4	85 aa		5.2	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms