RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 XPR1Q9UBH6 696 aa12.3□□□□□ -0.44
HNRNPC-205ENST00000553300 VTI1BQ9UEU0 232 aa12.3□□□□□ -0.44
HNRNPC-205ENST00000553300 PPT2Q9UMR5 302 aa12.3□□□□□ -0.44
HNRNPC-205ENST00000553300 ICE1Q9Y2F5 2266 aa12.3□□□□□ -0.44
HNRNPC-205ENST00000553300 CLDN16Q9Y5I7 305 aa12.3□□□□□ -0.44
HNRNPC-205ENST00000553300 CLCA3PQ9Y6N3 262 aa12.3□□□□□ -0.44
HNRNPC-205ENST00000553300 NBPF19A0A087WUL8 3843 aa12.29□□□□□ -0.44
HNRNPC-205ENST00000553300 IQANK1A0A1B0GTG1 560 aa12.29□□□□□ -0.44
HNRNPC-205ENST00000553300 A8MUA0 341 aa12.29□□□□□ -0.44
HNRNPC-205ENST00000553300 FOXE1O00358 373 aaPredicted RBP12.29□□□□□ -0.44
HNRNPC-205ENST00000553300 RIPK2O43353 540 aa12.29□□□□□ -0.44
HNRNPC-205ENST00000553300 SIX3O95343 332 aaPredicted RBP12.29□□□□□ -0.44
HNRNPC-205ENST00000553300 RHOXF2BP0C7M4 288 aa12.29□□□□□ -0.44
HNRNPC-205ENST00000553300 EEF1DP29692 281 aaKnown RBP12.29□□□□□ -0.44
HNRNPC-205ENST00000553300 PPP2R1BP30154 601 aa12.29□□□□□ -0.44
HNRNPC-205ENST00000553300 TLX1P31314 330 aaPredicted RBP12.29□□□□□ -0.44
HNRNPC-205ENST00000553300 TRHRP34981 398 aaPredicted RBP12.29□□□□□ -0.44
HNRNPC-205ENST00000553300 CYB561P49447 251 aa12.29□□□□□ -0.44
HNRNPC-205ENST00000553300 CUL3Q13618 768 aa12.29□□□□□ -0.44
HNRNPC-205ENST00000553300 DDX39BQ13838 428 aaKnown RBP12.29□□□□□ -0.44
HNRNPC-205ENST00000553300 CPSF6Q16630 551 aaKnown RBP eCLIP12.29□□□□□ -0.443e-7■■■□□ 15.6
HNRNPC-205ENST00000553300 ZNF793Q6ZN11 406 aa12.29□□□□□ -0.44
HNRNPC-205ENST00000553300 AMER2Q8N7J2 671 aa12.29□□□□□ -0.44
HNRNPC-205ENST00000553300 PTGR2Q8N8N7 351 aaPredicted RBP12.29□□□□□ -0.44
HNRNPC-205ENST00000553300 FAM98AQ8NCA5 519 aaKnown RBP12.29□□□□□ -0.44
HNRNPC-205ENST00000553300 MORN4Q8NDC4 146 aa12.29□□□□□ -0.44
HNRNPC-205ENST00000553300 PHF21BQ96EK2 531 aa12.29□□□□□ -0.44
HNRNPC-205ENST00000553300 SCMH1Q96GD3 660 aa12.29□□□□□ -0.44
HNRNPC-205ENST00000553300 MTERF1Q99551 399 aaKnown RBP12.29□□□□□ -0.44
HNRNPC-205ENST00000553300 MAPKAP1Q9BPZ7 522 aa12.29□□□□□ -0.44
HNRNPC-205ENST00000553300 RHOXF2Q9BQY4 288 aa12.29□□□□□ -0.44
HNRNPC-205ENST00000553300 ALOXE3Q9BYJ1 711 aa12.29□□□□□ -0.44
HNRNPC-205ENST00000553300 OR51B5Q9H339 312 aa12.29□□□□□ -0.44
HNRNPC-205ENST00000553300 NOL11Q9H8H0 719 aaKnown RBP12.29□□□□□ -0.44
HNRNPC-205ENST00000553300 DMRT3Q9NQL9 472 aa12.29□□□□□ -0.44
HNRNPC-205ENST00000553300 ZNF358Q9NW07 568 aa12.29□□□□□ -0.44
HNRNPC-205ENST00000553300 LRFN1Q9P244 771 aa12.29□□□□□ -0.44
HNRNPC-205ENST00000553300 PHF11Q9UIL8 331 aa12.29□□□□□ -0.44
HNRNPC-205ENST00000553300 WIPF3A6NGB9 483 aa12.28□□□□□ -0.44
HNRNPC-205ENST00000553300 ZFAND5O76080 213 aa12.28□□□□□ -0.44
HNRNPC-205ENST00000553300 IFNA16P05015 189 aa12.28□□□□□ -0.44
HNRNPC-205ENST00000553300 CPN2P22792 545 aa12.28□□□□□ -0.44
HNRNPC-205ENST00000553300 HLCSP50747 726 aa12.28□□□□□ -0.44
HNRNPC-205ENST00000553300 GPR143P51810 404 aa12.28□□□□□ -0.44
HNRNPC-205ENST00000553300 TDGF1P3P51864 188 aa12.28□□□□□ -0.44
HNRNPC-205ENST00000553300 CCNG1P51959 295 aa12.28□□□□□ -0.44
HNRNPC-205ENST00000553300 HNRNPFP52597 415 aaKnown RBP12.28□□□□□ -0.44
HNRNPC-205ENST00000553300 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.28□□□□□ -0.444e-11■□□□□ 10.6
HNRNPC-205ENST00000553300 C4orf17Q53FE4 359 aa12.28□□□□□ -0.44
HNRNPC-205ENST00000553300 SPINK14Q6IE38 97 aa12.28□□□□□ -0.44
HNRNPC-205ENST00000553300 SLC25A25Q6KCM7 469 aa12.28□□□□□ -0.44
HNRNPC-205ENST00000553300 KIF2BQ8N4N8 673 aa12.28□□□□□ -0.44
HNRNPC-205ENST00000553300 TMEM52Q8NDY8 209 aa12.28□□□□□ -0.44
HNRNPC-205ENST00000553300 OR14A16Q8NHC5 309 aa12.28□□□□□ -0.44
HNRNPC-205ENST00000553300 UHMK1Q8TAS1 419 aaKnown RBP12.28□□□□□ -0.44
HNRNPC-205ENST00000553300 TANKQ92844 425 aa12.28□□□□□ -0.44
HNRNPC-205ENST00000553300 TMEM125Q96AQ2 219 aa12.28□□□□□ -0.44
HNRNPC-205ENST00000553300 SIGLEC12Q96PQ1 595 aa12.28□□□□□ -0.44
HNRNPC-205ENST00000553300 CSF3RQ99062 836 aa12.28□□□□□ -0.44
HNRNPC-205ENST00000553300 ERRFI1Q9UJM3 462 aaPredicted RBP12.28□□□□□ -0.44
HNRNPC-205ENST00000553300 RNF11Q9Y3C5 154 aa12.28□□□□□ -0.44
HNRNPC-205ENST00000553300 DIDO1Q9BTC0 2240 aaKnown RBP12.27□□□□□ -0.44
HNRNPC-205ENST00000553300 NAV2Q8IVL1 2488 aa12.27□□□□□ -0.44
HNRNPC-205ENST00000553300 UTP20O75691 2785 aaKnown RBP12.27□□□□□ -0.45
HNRNPC-205ENST00000553300 TRBV11-1A0A0K0K1C0 115 aa12.27□□□□□ -0.45
HNRNPC-205ENST00000553300 A0A1B0GUH1 482 aa12.27□□□□□ -0.45
HNRNPC-205ENST00000553300 LRRC14BA6NHZ5 514 aa12.27□□□□□ -0.45
HNRNPC-205ENST00000553300 TGFBR3LH3BV60 316 aa12.27□□□□□ -0.45
HNRNPC-205ENST00000553300 RTCAO00442 366 aaKnown RBP12.27□□□□□ -0.45
HNRNPC-205ENST00000553300 DYRK3O43781 588 aa12.27□□□□□ -0.45
HNRNPC-205ENST00000553300 MAN1A2O60476 641 aa12.27□□□□□ -0.45
HNRNPC-205ENST00000553300 NEURL1O76050 574 aa12.27□□□□□ -0.45
HNRNPC-205ENST00000553300 SEMA3DO95025 777 aa12.27□□□□□ -0.45
HNRNPC-205ENST00000553300 OTCP00480 354 aa12.27□□□□□ -0.45
HNRNPC-205ENST00000553300 SP1P08047 785 aa12.27□□□□□ -0.45
HNRNPC-205ENST00000553300 STSP08842 583 aa12.27□□□□□ -0.45
HNRNPC-205ENST00000553300 COX7A2P14406 83 aa12.27□□□□□ -0.45
HNRNPC-205ENST00000553300 TAC1P20366 129 aa12.27□□□□□ -0.45
HNRNPC-205ENST00000553300 TPP2P29144 1249 aaPredicted RBP12.27□□□□□ -0.45
HNRNPC-205ENST00000553300 ARL1P40616 181 aaPredicted RBP12.27□□□□□ -0.45
HNRNPC-205ENST00000553300 BUD31P41223 144 aaPredicted RBP12.27□□□□□ -0.45
HNRNPC-205ENST00000553300 PER3P56645 1201 aa12.27□□□□□ -0.45
HNRNPC-205ENST00000553300 RPS13P62277 151 aaKnown RBP12.27□□□□□ -0.45
HNRNPC-205ENST00000553300 SLAMF1Q13291 335 aa12.27□□□□□ -0.45
HNRNPC-205ENST00000553300 ZRSR2Q15696 482 aaKnown RBP12.27□□□□□ -0.45
HNRNPC-205ENST00000553300 GGTA1PQ4G0N0 100 aa12.27□□□□□ -0.45
HNRNPC-205ENST00000553300 KRTCAP3Q53RY4 240 aa12.27□□□□□ -0.45
HNRNPC-205ENST00000553300 CLNKQ7Z7G1 428 aa12.27□□□□□ -0.45
HNRNPC-205ENST00000553300 GPR180Q86V85 440 aa12.27□□□□□ -0.45
HNRNPC-205ENST00000553300 MYRIPQ8NFW9 859 aa12.27□□□□□ -0.45
HNRNPC-205ENST00000553300 OR8K3Q8NH51 312 aa12.27□□□□□ -0.45
HNRNPC-205ENST00000553300 WDR20Q8TBZ3 569 aa12.27□□□□□ -0.45
HNRNPC-205ENST00000553300 ACMSDQ8TDX5 336 aa12.27□□□□□ -0.45
HNRNPC-205ENST00000553300 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.27□□□□□ -0.453e-6■■■■■ 50.8
HNRNPC-205ENST00000553300 NCLNQ969V3 563 aa12.27□□□□□ -0.45
HNRNPC-205ENST00000553300 SERPINI1Q99574 410 aa12.27□□□□□ -0.45
HNRNPC-205ENST00000553300 C1QTNF3Q9BXJ4 246 aa12.27□□□□□ -0.45
HNRNPC-205ENST00000553300 RPF2Q9H7B2 306 aaKnown RBP12.27□□□□□ -0.45
HNRNPC-205ENST00000553300 DDX31Q9H8H2 851 aaKnown RBP12.27□□□□□ -0.45
HNRNPC-205ENST00000553300 RYDENQ9NUL5 291 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms