RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 SYTL1Q8IYJ3 562 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 KIAA2013Q8IYS2 634 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 ADGRF3Q8IZF5 1079 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 ARFGAP2Q8N6H7 521 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 LINC01555Q8NAE3 123 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 CPEB3Q8NE35 698 aaKnown RBP5.5□□□□□ -1.53
SCAF11-213ENST00000550629 OR4E2Q8NGC2 313 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 OR4D9Q8NGE8 314 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 RAB3IL1Q8TBN0 382 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 IFI44Q8TCB0 444 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 TCP10LQ8TDR4 215 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 GRAMD1AQ96CP6 724 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 FAM111AQ96PZ2 611 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 EGFL8Q99944 293 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 CCDC3Q9BQI4 270 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 TRMOQ9BU70 441 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 ERVK-6Q9BXR3 956 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 EHD1Q9H4M9 534 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 KCNK9Q9NPC2 374 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 HRASLS2Q9NWW9 162 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 UTP6Q9NYH9 597 aaKnown RBP5.5□□□□□ -1.53
SCAF11-213ENST00000550629 OGFRQ9NZT2 677 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 SEMA5BQ9P283 1151 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 CPSF2Q9P2I0 782 aaKnown RBP5.5□□□□□ -1.53
SCAF11-213ENST00000550629 PDP2Q9P2J9 529 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 ANKMY1Q9P2S6 941 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 COPG2Q9UBF2 871 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 POMT2Q9UKY4 750 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 SNX7Q9UNH6 387 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 PI4KAP42356 2102 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 TMEM131Q92545 1883 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 PIKFYVEQ9Y2I7 2098 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 DMDP11532 3685 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 RIF1Q5UIP0 2472 aaKnown RBP5.49□□□□□ -1.53
SCAF11-213ENST00000550629 PRAMEF33A0A0G2JMD5 474 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 A0A1W2PPV9 198 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 TLCD2A6NGC4 264 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 UNC119BA6NIH7 251 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 A8MT66 165 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 FAM171A2A8MVW0 826 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 D6RAR5 112 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 K7EPI3 171 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 BTN3A3O00478 584 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 NTN3O00634 580 aaPredicted RBP5.49□□□□□ -1.53
SCAF11-213ENST00000550629 E2F3O00716 465 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 TAPBPO15533 448 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 B4GAT1O43505 415 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 UGDHO60701 494 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 SPAG7O75391 227 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 KATNA1O75449 491 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 MLYCDO95822 493 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 GUCA1CO95843 209 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 RPLP0P05388 317 aaKnown RBP5.49□□□□□ -1.53
SCAF11-213ENST00000550629 BPGMP07738 259 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 RPS17P08708 135 aaKnown RBP5.49□□□□□ -1.53
SCAF11-213ENST00000550629 CREB1P16220 341 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 UGT2B7P16662 529 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 NPPBP16860 134 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 AMD1P17707 334 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 GNAZP19086 355 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 NR1D1P20393 614 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 OAS2P29728 719 aaKnown RBP5.49□□□□□ -1.53
SCAF11-213ENST00000550629 CMPK1P30085 196 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 PLA2G5P39877 138 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 CASP2P42575 452 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 OR1D5P58170 312 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 TBPL1P62380 186 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 COL10A1Q03692 680 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 PRDX1Q06830 199 aaKnown RBP5.49□□□□□ -1.53
SCAF11-213ENST00000550629 CDC16Q13042 620 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 LCP2Q13094 533 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 NAE1Q13564 534 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 TRA2AQ13595 282 aaKnown RBP eCLIP5.49□□□□□ -1.53
SCAF11-213ENST00000550629 E2F2Q14209 437 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 PCLAFQ15004 111 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 TBCCQ15814 346 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 PTCHD3Q3KNS1 767 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 C10orf62Q5T681 223 aaPredicted RBP5.49□□□□□ -1.53
SCAF11-213ENST00000550629 HHATQ5VTY9 493 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 LIPMQ5VYY2 423 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 ICE2Q659A1 982 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 TMEM71Q6P5X7 295 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 PGM2L1Q6PCE3 622 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 SPESP1Q6UW49 350 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 LCTLQ6UWM7 567 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 RBM44Q6ZP01 1051 aaKnown RBP5.49□□□□□ -1.53
SCAF11-213ENST00000550629 MED25Q71SY5 747 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 PRSS42Q7Z5A4 293 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 THOC6Q86W42 341 aaKnown RBP5.49□□□□□ -1.53
SCAF11-213ENST00000550629 KIRREL3Q8IZU9 778 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 CHCHD4Q8N4Q1 142 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 PTGR2Q8N8N7 351 aaPredicted RBP5.49□□□□□ -1.53
SCAF11-213ENST00000550629 Q8N9G6 341 aaPredicted RBP5.49□□□□□ -1.53
SCAF11-213ENST00000550629 CCDC63Q8NA47 563 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 ABHD11Q8NFV4 315 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 OR2L3Q8NG85 312 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 OR2A1Q8NGT9 310 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 OR6Y1Q8NGX8 325 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 FLVCR1-AS1Q8TAF5 88 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 NRG4Q8WWG1 115 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms