RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 ZCCHC7Q8N3Z6 543 aaKnown RBP17.09■□□□□ 0.33
VEGFA-222ENST00000520948 GBP7Q8N8V2 638 aaPredicted RBP17.09■□□□□ 0.33
VEGFA-222ENST00000520948 ACOT4Q8N9L9 421 aa17.09■□□□□ 0.33
VEGFA-222ENST00000520948 GALNT11Q8NCW6 608 aa17.09■□□□□ 0.33
VEGFA-222ENST00000520948 RAB3IL1Q8TBN0 382 aa17.09■□□□□ 0.33
VEGFA-222ENST00000520948 CHTF18Q8WVB6 975 aa17.09■□□□□ 0.33
VEGFA-222ENST00000520948 MIEF2Q96C03 454 aa17.09■□□□□ 0.33
VEGFA-222ENST00000520948 OR1F2PQ96R84 312 aa17.09■□□□□ 0.33
VEGFA-222ENST00000520948 HBEGFQ99075 208 aa17.09■□□□□ 0.33
VEGFA-222ENST00000520948 SORT1Q99523 831 aa17.09■□□□□ 0.33
VEGFA-222ENST00000520948 SORBS1Q9BX66 1292 aaKnown RBP17.09■□□□□ 0.33
VEGFA-222ENST00000520948 ACPTQ9BZG2 426 aa17.09■□□□□ 0.33
VEGFA-222ENST00000520948 DDX31Q9H8H2 851 aaKnown RBP17.09■□□□□ 0.33
VEGFA-222ENST00000520948 LANCL2Q9NS86 450 aa17.09■□□□□ 0.33
VEGFA-222ENST00000520948 C14orf105Q9NVL8 296 aa17.09■□□□□ 0.33
VEGFA-222ENST00000520948 HAO1Q9UJM8 370 aa17.09■□□□□ 0.33
VEGFA-222ENST00000520948 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.09■□□□□ 0.33
VEGFA-222ENST00000520948 PADI2Q9Y2J8 665 aa17.09■□□□□ 0.33
VEGFA-222ENST00000520948 PTRH2Q9Y3E5 179 aaKnown RBP17.09■□□□□ 0.33
VEGFA-222ENST00000520948 TRAF6Q9Y4K3 522 aa17.09■□□□□ 0.33
VEGFA-222ENST00000520948 CCL27Q9Y4X3 112 aa17.09■□□□□ 0.33
VEGFA-222ENST00000520948 DNAJC15Q9Y5T4 150 aa17.09■□□□□ 0.33
VEGFA-222ENST00000520948 ICE1Q9Y2F5 2266 aa17.08■□□□□ 0.33
VEGFA-222ENST00000520948 SHANK1Q9Y566 2161 aa17.08■□□□□ 0.33
VEGFA-222ENST00000520948 NUP210LQ5VU65 1888 aa17.08■□□□□ 0.33
VEGFA-222ENST00000520948 B3GALT2O43825 422 aa17.08■□□□□ 0.32
VEGFA-222ENST00000520948 LYPLA1O75608 230 aaPredicted RBP17.08■□□□□ 0.32
VEGFA-222ENST00000520948 SNUPNO95149 360 aaKnown RBP17.08■□□□□ 0.32
VEGFA-222ENST00000520948 CERS1P27544 350 aa17.08■□□□□ 0.32
VEGFA-222ENST00000520948 XCR1P46094 333 aa17.08■□□□□ 0.32
VEGFA-222ENST00000520948 SLC1A6P48664 564 aa17.08■□□□□ 0.32
VEGFA-222ENST00000520948 BST1Q10588 318 aa17.08■□□□□ 0.32
VEGFA-222ENST00000520948 STX3Q13277 289 aa17.08■□□□□ 0.32
VEGFA-222ENST00000520948 PRR30Q53SZ7 412 aaPredicted RBP17.08■□□□□ 0.32
VEGFA-222ENST00000520948 PPP1R14CQ8TAE6 165 aa17.08■□□□□ 0.32
VEGFA-222ENST00000520948 C11orf24Q96F05 449 aaPredicted RBP17.08■□□□□ 0.32
VEGFA-222ENST00000520948 PEX11GQ96HA9 241 aa17.08■□□□□ 0.32
VEGFA-222ENST00000520948 CENPKQ9BS16 269 aa17.08■□□□□ 0.32
VEGFA-222ENST00000520948 YIPF2Q9BWQ6 316 aa17.08■□□□□ 0.32
VEGFA-222ENST00000520948 MRPL1Q9BYD6 325 aaKnown RBP17.08■□□□□ 0.32
VEGFA-222ENST00000520948 TUBB1Q9H4B7 451 aa17.08■□□□□ 0.32
VEGFA-222ENST00000520948 SOX17Q9H6I2 414 aaPredicted RBP17.08■□□□□ 0.32
VEGFA-222ENST00000520948 VPS29Q9UBQ0 182 aa17.08■□□□□ 0.32
VEGFA-222ENST00000520948 PLEKHB1Q9UF11 243 aaPredicted RBP17.08■□□□□ 0.32
VEGFA-222ENST00000520948 DAPP1Q9UN19 280 aa17.08■□□□□ 0.32
VEGFA-222ENST00000520948 SLC12A4Q9UP95 1085 aa17.08■□□□□ 0.32
VEGFA-222ENST00000520948 PCDHGA9Q9Y5G4 932 aaKnown RBP17.08■□□□□ 0.32
VEGFA-222ENST00000520948 PCSK5Q92824 1860 aa17.07■□□□□ 0.32
VEGFA-222ENST00000520948 SPTAN1Q13813 2472 aaKnown RBP17.07■□□□□ 0.32
VEGFA-222ENST00000520948 A0A0A6YYD5 115 aa17.07■□□□□ 0.32
VEGFA-222ENST00000520948 TMEM233B4DJY2 109 aa17.07■□□□□ 0.32
VEGFA-222ENST00000520948 NPIPB8E9PQR5 432 aa17.07■□□□□ 0.32
VEGFA-222ENST00000520948 DYNC1I1O14576 645 aa17.07■□□□□ 0.32
VEGFA-222ENST00000520948 SNNO75324 88 aaPredicted RBP17.07■□□□□ 0.32
VEGFA-222ENST00000520948 EEDO75530 441 aaKnown RBP17.07■□□□□ 0.32
VEGFA-222ENST00000520948 JRKO75564 520 aa17.07■□□□□ 0.32
VEGFA-222ENST00000520948 SORBS2O94875 1100 aaKnown RBP17.07■□□□□ 0.32
VEGFA-222ENST00000520948 RNF224P0DH78 156 aa17.07■□□□□ 0.32
VEGFA-222ENST00000520948 RNH1P13489 461 aaKnown RBP17.07■□□□□ 0.32
VEGFA-222ENST00000520948 FOLR3P41439 243 aa17.07■□□□□ 0.32
VEGFA-222ENST00000520948 RAP1GDS1P52306 607 aa17.07■□□□□ 0.32
VEGFA-222ENST00000520948 LIM2P55344 173 aa17.07■□□□□ 0.32
VEGFA-222ENST00000520948 RAB38P57729 211 aa17.07■□□□□ 0.32
VEGFA-222ENST00000520948 SCIMPQ6UWF3 145 aa17.07■□□□□ 0.32
VEGFA-222ENST00000520948 SHISA6Q6ZSJ9 500 aa17.07■□□□□ 0.32
VEGFA-222ENST00000520948 NACC2Q96BF6 587 aa17.07■□□□□ 0.32
VEGFA-222ENST00000520948 TBC1D20Q96BZ9 403 aa17.07■□□□□ 0.32
VEGFA-222ENST00000520948 MAPKAP1Q9BPZ7 522 aa17.07■□□□□ 0.32
VEGFA-222ENST00000520948 MFRPQ9BY79 579 aa17.07■□□□□ 0.32
VEGFA-222ENST00000520948 MANSC1Q9H8J5 431 aa17.07■□□□□ 0.32
VEGFA-222ENST00000520948 LYRM4Q9HD34 91 aa17.07■□□□□ 0.32
VEGFA-222ENST00000520948 NMRK1Q9NWW6 199 aa17.07■□□□□ 0.32
VEGFA-222ENST00000520948 SIRT5Q9NXA8 310 aa17.07■□□□□ 0.32
VEGFA-222ENST00000520948 AHSPQ9NZD4 102 aa17.07■□□□□ 0.32
VEGFA-222ENST00000520948 ADAM29Q9UKF5 820 aa17.07■□□□□ 0.32
VEGFA-222ENST00000520948 RAP2CQ9Y3L5 183 aa17.07■□□□□ 0.32
VEGFA-222ENST00000520948 FAM227AF5H4B4 570 aa17.06■□□□□ 0.32
VEGFA-222ENST00000520948 CYR61O00622 381 aa17.06■□□□□ 0.32
VEGFA-222ENST00000520948 KLF11O14901 512 aa17.06■□□□□ 0.32
VEGFA-222ENST00000520948 SEMA7AO75326 666 aa17.06■□□□□ 0.32
VEGFA-222ENST00000520948 HSPA4LO95757 839 aa17.06■□□□□ 0.32
VEGFA-222ENST00000520948 FHP07954 510 aa17.06■□□□□ 0.32
VEGFA-222ENST00000520948 CYC1P08574 325 aa17.06■□□□□ 0.32
VEGFA-222ENST00000520948 MMP11P24347 488 aa17.06■□□□□ 0.32
VEGFA-222ENST00000520948 TPP2P29144 1249 aaPredicted RBP17.06■□□□□ 0.32
VEGFA-222ENST00000520948 SSR2P43308 183 aa17.06■□□□□ 0.32
VEGFA-222ENST00000520948 TUBB8Q3ZCM7 444 aa17.06■□□□□ 0.32
VEGFA-222ENST00000520948 SH2D4BQ5SQS7 431 aa17.06■□□□□ 0.32
VEGFA-222ENST00000520948 Q6ZSR9 355 aa17.06■□□□□ 0.32
VEGFA-222ENST00000520948 PLPP5Q8NEB5 264 aa17.06■□□□□ 0.32
VEGFA-222ENST00000520948 COPS7BQ9H9Q2 264 aaPredicted RBP17.06■□□□□ 0.32
VEGFA-222ENST00000520948 SEMA3GQ9NS98 782 aa17.06■□□□□ 0.32
VEGFA-222ENST00000520948 ASB4Q9Y574 426 aa17.06■□□□□ 0.32
VEGFA-222ENST00000520948 SPTBN1Q01082 2364 aaKnown RBP17.05■□□□□ 0.32
VEGFA-222ENST00000520948 A6NL46 340 aa17.05■□□□□ 0.32
VEGFA-222ENST00000520948 IDSB3KWA1 339 aa17.05■□□□□ 0.32
VEGFA-222ENST00000520948 TMPRSS11DO60235 418 aa17.05■□□□□ 0.32
VEGFA-222ENST00000520948 CRCPO75575 148 aa17.05■□□□□ 0.32
VEGFA-222ENST00000520948 IGHEP01854 428 aa17.05■□□□□ 0.32
VEGFA-222ENST00000520948 NEFHP12036 1026 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms