RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 QPCTLQ9NXS2 382 aa11.59□□□□□ -0.55
DDX41-215ENST00000512431 ADAMTS6Q9UKP5 1117 aa11.59□□□□□ -0.55
DDX41-215ENST00000512431 MAD1L1Q9Y6D9 718 aa11.59□□□□□ -0.55
DDX41-215ENST00000512431 JMJD1CQ15652 2540 aa11.59□□□□□ -0.55
DDX41-215ENST00000512431 A0A088AWK7 358 aa11.58□□□□□ -0.56
DDX41-215ENST00000512431 C15orf38-AP3S2A0A0A6YYH1 394 aa11.58□□□□□ -0.56
DDX41-215ENST00000512431 NRDCO43847 1150 aa11.58□□□□□ -0.56
DDX41-215ENST00000512431 ZNF10P21506 573 aaPredicted RBP11.58□□□□□ -0.56
DDX41-215ENST00000512431 CTSSP25774 331 aa11.58□□□□□ -0.56
DDX41-215ENST00000512431 PIGAP37287 484 aa11.58□□□□□ -0.56
DDX41-215ENST00000512431 ZNF136P52737 540 aa11.58□□□□□ -0.56
DDX41-215ENST00000512431 STXBP1P61764 594 aaKnown RBP11.58□□□□□ -0.56
DDX41-215ENST00000512431 RNF4P78317 190 aa11.58□□□□□ -0.56
DDX41-215ENST00000512431 SARNPP82979 210 aaKnown RBP11.58□□□□□ -0.56
DDX41-215ENST00000512431 CDK16Q00536 496 aa11.58□□□□□ -0.56
DDX41-215ENST00000512431 CBLBQ13191 982 aa11.58□□□□□ -0.56
DDX41-215ENST00000512431 CTBP1Q13363 440 aa11.58□□□□□ -0.56
DDX41-215ENST00000512431 SEL1L2Q5TEA6 688 aa11.58□□□□□ -0.56
DDX41-215ENST00000512431 ZNF549Q6P9A3 640 aa11.58□□□□□ -0.56
DDX41-215ENST00000512431 ZNF595Q8IYB9 648 aa11.58□□□□□ -0.56
DDX41-215ENST00000512431 OR8K3Q8NH51 312 aa11.58□□□□□ -0.56
DDX41-215ENST00000512431 OR14A16Q8NHC5 309 aa11.58□□□□□ -0.56
DDX41-215ENST00000512431 EEF1AKMT1Q8WVE0 214 aa11.58□□□□□ -0.56
DDX41-215ENST00000512431 C1orf54Q8WWF1 131 aa11.58□□□□□ -0.56
DDX41-215ENST00000512431 SLC5A11Q8WWX8 675 aa11.58□□□□□ -0.56
DDX41-215ENST00000512431 ATL1Q8WXF7 558 aa11.58□□□□□ -0.56
DDX41-215ENST00000512431 ISL2Q96A47 359 aa11.58□□□□□ -0.56
DDX41-215ENST00000512431 PYCR2Q96C36 320 aa11.58□□□□□ -0.56
DDX41-215ENST00000512431 JSRP1Q96MG2 331 aaPredicted RBP11.58□□□□□ -0.56
DDX41-215ENST00000512431 AIF1LQ9BQI0 150 aa11.58□□□□□ -0.56
DDX41-215ENST00000512431 OR8D2Q9GZM6 311 aa11.58□□□□□ -0.56
DDX41-215ENST00000512431 SLC6A15Q9H2J7 730 aa11.58□□□□□ -0.56
DDX41-215ENST00000512431 KLHL31Q9H511 634 aa11.58□□□□□ -0.56
DDX41-215ENST00000512431 ZNF703Q9H7S9 590 aaPredicted RBP11.58□□□□□ -0.56
DDX41-215ENST00000512431 TRPS1Q9UHF7 1281 aa11.58□□□□□ -0.56
DDX41-215ENST00000512431 TRMT6Q9UJA5 497 aaKnown RBP11.58□□□□□ -0.56
DDX41-215ENST00000512431 MED16Q9Y2X0 877 aa11.58□□□□□ -0.56
DDX41-215ENST00000512431 DYRK1BQ9Y463 629 aa11.58□□□□□ -0.56
DDX41-215ENST00000512431 CSPG4Q6UVK1 2322 aa11.58□□□□□ -0.56
DDX41-215ENST00000512431 DNAJC13O75165 2243 aa11.58□□□□□ -0.56
DDX41-215ENST00000512431 SH3D21A4FU49 640 aa11.57□□□□□ -0.56
DDX41-215ENST00000512431 ERN1O75460 977 aaKnown RBP11.57□□□□□ -0.56
DDX41-215ENST00000512431 SERPINA6P08185 405 aa11.57□□□□□ -0.56
DDX41-215ENST00000512431 FPR1P21462 350 aa11.57□□□□□ -0.56
DDX41-215ENST00000512431 TRPC1P48995 793 aa11.57□□□□□ -0.56
DDX41-215ENST00000512431 AGFG1P52594 562 aaKnown RBP11.57□□□□□ -0.56
DDX41-215ENST00000512431 WNT3P56703 355 aa11.57□□□□□ -0.56
DDX41-215ENST00000512431 RAB38P57729 211 aa11.57□□□□□ -0.56
DDX41-215ENST00000512431 STX4Q12846 297 aa11.57□□□□□ -0.56
DDX41-215ENST00000512431 TBX2Q13207 712 aaPredicted RBP11.57□□□□□ -0.56
DDX41-215ENST00000512431 DHX34Q14147 1143 aaKnown RBP11.57□□□□□ -0.56
DDX41-215ENST00000512431 RCN2Q14257 317 aa11.57□□□□□ -0.56
DDX41-215ENST00000512431 ARMC3Q5W041 872 aa11.57□□□□□ -0.56
DDX41-215ENST00000512431 NSUN5P2Q63ZY6 315 aa11.57□□□□□ -0.56
DDX41-215ENST00000512431 POMZP3Q6PJE2 187 aa11.57□□□□□ -0.56
DDX41-215ENST00000512431 GSTA5Q7RTV2 222 aa11.57□□□□□ -0.56
DDX41-215ENST00000512431 CLNKQ7Z7G1 428 aa11.57□□□□□ -0.56
DDX41-215ENST00000512431 SPNS2Q8IVW8 549 aa11.57□□□□□ -0.56
DDX41-215ENST00000512431 RASGEF1CQ8N431 466 aa11.57□□□□□ -0.56
DDX41-215ENST00000512431 OR56A3Q8NH54 315 aa11.57□□□□□ -0.56
DDX41-215ENST00000512431 NEIL2Q969S2 332 aa11.57□□□□□ -0.56
DDX41-215ENST00000512431 RBM24Q9BX46 236 aaKnown RBP11.57□□□□□ -0.56
DDX41-215ENST00000512431 TRMT1Q9NXH9 659 aaKnown RBP11.57□□□□□ -0.56
DDX41-215ENST00000512431 ARL15Q9NXU5 204 aa11.57□□□□□ -0.56
DDX41-215ENST00000512431 COPS7AQ9UBW8 275 aa11.57□□□□□ -0.56
DDX41-215ENST00000512431 NDRG3Q9UGV2 375 aa11.57□□□□□ -0.56
DDX41-215ENST00000512431 EPN1Q9Y6I3 576 aaPredicted RBP11.57□□□□□ -0.56
DDX41-215ENST00000512431 RTTNQ86VV8 2226 aa11.56□□□□□ -0.56
DDX41-215ENST00000512431 MAGEB16A2A368 324 aa11.56□□□□□ -0.56
DDX41-215ENST00000512431 TRIM64A6NGJ6 449 aa11.56□□□□□ -0.56
DDX41-215ENST00000512431 TRIM64BA6NI03 449 aa11.56□□□□□ -0.56
DDX41-215ENST00000512431 B3GALT2O43825 422 aa11.56□□□□□ -0.56
DDX41-215ENST00000512431 CRLF1O75462 422 aa11.56□□□□□ -0.56
DDX41-215ENST00000512431 FTCDO95954 541 aa11.56□□□□□ -0.56
DDX41-215ENST00000512431 IL18BPO95998 194 aa11.56□□□□□ -0.56
DDX41-215ENST00000512431 RFPL3SP0C7P2 107 aa11.56□□□□□ -0.56
DDX41-215ENST00000512431 GDF1P27539 372 aa11.56□□□□□ -0.56
DDX41-215ENST00000512431 CPA2P48052 419 aa11.56□□□□□ -0.56
DDX41-215ENST00000512431 DHX9Q08211 1270 aaKnown RBP11.56□□□□□ -0.56
DDX41-215ENST00000512431 DUSP8Q13202 625 aa11.56□□□□□ -0.56
DDX41-215ENST00000512431 RUNX2Q13950 521 aa11.56□□□□□ -0.56
DDX41-215ENST00000512431 MPEG1Q2M385 716 aa11.56□□□□□ -0.56
DDX41-215ENST00000512431 DENND6AQ8IWF6 608 aa11.56□□□□□ -0.56
DDX41-215ENST00000512431 LMNTD2Q8IXW0 634 aa11.56□□□□□ -0.56
DDX41-215ENST00000512431 LRRC25Q8N386 305 aaPredicted RBP11.56□□□□□ -0.56
DDX41-215ENST00000512431 ANKRD53Q8N9V6 530 aa11.56□□□□□ -0.56
DDX41-215ENST00000512431 FAM47BQ8NA70 645 aa11.56□□□□□ -0.56
DDX41-215ENST00000512431 GABPB2Q8TAK5 448 aaPredicted RBP11.56□□□□□ -0.56
DDX41-215ENST00000512431 SLC22A8Q8TCC7 542 aa11.56□□□□□ -0.56
DDX41-215ENST00000512431 CALML6Q8TD86 181 aa11.56□□□□□ -0.56
DDX41-215ENST00000512431 GAL3ST3Q96A11 431 aa11.56□□□□□ -0.56
DDX41-215ENST00000512431 PERPQ96FX8 193 aa11.56□□□□□ -0.56
DDX41-215ENST00000512431 TSNARE1Q96NA8 513 aa11.56□□□□□ -0.56
DDX41-215ENST00000512431 RUNDC3BQ96NL0 473 aa11.56□□□□□ -0.56
DDX41-215ENST00000512431 OR4K3Q96R72 315 aa11.56□□□□□ -0.56
DDX41-215ENST00000512431 TRIB1Q96RU8 372 aa11.56□□□□□ -0.56
DDX41-215ENST00000512431 TIMP4Q99727 224 aa11.56□□□□□ -0.56
DDX41-215ENST00000512431 CCL19Q99731 98 aa11.56□□□□□ -0.56
DDX41-215ENST00000512431 ALOXE3Q9BYJ1 711 aa11.56□□□□□ -0.56
DDX41-215ENST00000512431 SPNS1Q9H2V7 528 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms