RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 GRK2P25098 689 aa14.09□□□□□ -0.15
RNF4-210ENST00000508235 MAPK12P53778 367 aa14.09□□□□□ -0.15
RNF4-210ENST00000508235 OR4D2P58180 307 aa14.09□□□□□ -0.15
RNF4-210ENST00000508235 BTG2P78543 158 aa14.09□□□□□ -0.15
RNF4-210ENST00000508235 TNFRSF17Q02223 184 aa14.09□□□□□ -0.15
RNF4-210ENST00000508235 BIKQ13323 160 aa14.09□□□□□ -0.15
RNF4-210ENST00000508235 SERTAD2Q14140 314 aa14.09□□□□□ -0.15
RNF4-210ENST00000508235 LY6DQ14210 128 aa14.09□□□□□ -0.15
RNF4-210ENST00000508235 MYBPC3Q14896 1274 aa14.09□□□□□ -0.15
RNF4-210ENST00000508235 PCOLCEQ15113 449 aa14.09□□□□□ -0.15
RNF4-210ENST00000508235 IMPG1Q17R60 797 aa14.09□□□□□ -0.15
RNF4-210ENST00000508235 LACTB2Q53H82 288 aaPredicted RBP14.09□□□□□ -0.15
RNF4-210ENST00000508235 SFT2D3Q587I9 215 aa14.09□□□□□ -0.15
RNF4-210ENST00000508235 TCHHL1Q5QJ38 904 aaPredicted RBP14.09□□□□□ -0.15
RNF4-210ENST00000508235 CCNYL2Q5T2Q4 361 aa14.09□□□□□ -0.15
RNF4-210ENST00000508235 HHATQ5VTY9 493 aa14.09□□□□□ -0.15
RNF4-210ENST00000508235 RNF165Q6ZSG1 346 aa14.09□□□□□ -0.15
RNF4-210ENST00000508235 LANCL3Q6ZV70 420 aa14.09□□□□□ -0.15
RNF4-210ENST00000508235 COMMD6Q7Z4G1 85 aa14.09□□□□□ -0.15
RNF4-210ENST00000508235 TRIM46Q7Z4K8 759 aa14.09□□□□□ -0.15
RNF4-210ENST00000508235 HPS6Q86YV9 775 aa14.09□□□□□ -0.15
RNF4-210ENST00000508235 KIRREL3Q8IZU9 778 aa14.09□□□□□ -0.15
RNF4-210ENST00000508235 SHISA5Q8N114 240 aa14.09□□□□□ -0.15
RNF4-210ENST00000508235 EXD3Q8N9H8 876 aa14.09□□□□□ -0.15
RNF4-210ENST00000508235 TANKQ92844 425 aa14.09□□□□□ -0.15
RNF4-210ENST00000508235 KCNA7Q96RP8 456 aa14.09□□□□□ -0.15
RNF4-210ENST00000508235 CSF3RQ99062 836 aa14.09□□□□□ -0.15
RNF4-210ENST00000508235 HBEGFQ99075 208 aa14.09□□□□□ -0.15
RNF4-210ENST00000508235 ACPTQ9BZG2 426 aa14.09□□□□□ -0.15
RNF4-210ENST00000508235 SLC25A18Q9H1K4 315 aa14.09□□□□□ -0.15
RNF4-210ENST00000508235 ACBD3Q9H3P7 528 aa14.09□□□□□ -0.15
RNF4-210ENST00000508235 RPF2Q9H7B2 306 aaKnown RBP14.09□□□□□ -0.15
RNF4-210ENST00000508235 ZZEF1O43149 2961 aa14.09□□□□□ -0.15
RNF4-210ENST00000508235 MED13Q9UHV7 2174 aa14.09□□□□□ -0.15
RNF4-210ENST00000508235 OR2W5A6NFC9 320 aa14.08□□□□□ -0.16
RNF4-210ENST00000508235 A6NL46 340 aa14.08□□□□□ -0.16
RNF4-210ENST00000508235 PROM1O43490 865 aa14.08□□□□□ -0.16
RNF4-210ENST00000508235 SERPINE1P05121 402 aa14.08□□□□□ -0.16
RNF4-210ENST00000508235 SERPINA7P05543 415 aa14.08□□□□□ -0.16
RNF4-210ENST00000508235 KLK1P06870 262 aa14.08□□□□□ -0.16
RNF4-210ENST00000508235 GSTM5P46439 218 aa14.08□□□□□ -0.16
RNF4-210ENST00000508235 PGDP52209 483 aa14.08□□□□□ -0.16
RNF4-210ENST00000508235 EFNA3P52797 238 aa14.08□□□□□ -0.16
RNF4-210ENST00000508235 FOXA1P55317 472 aa14.08□□□□□ -0.16
RNF4-210ENST00000508235 TRA2BP62995 288 aaKnown RBP14.08□□□□□ -0.16
RNF4-210ENST00000508235 ACSM2AQ08AH3 577 aa14.08□□□□□ -0.16
RNF4-210ENST00000508235 STX4Q12846 297 aa14.08□□□□□ -0.16
RNF4-210ENST00000508235 VWA5B1Q5TIE3 1220 aa14.08□□□□□ -0.16
RNF4-210ENST00000508235 KANK2Q63ZY3 851 aa14.08□□□□□ -0.16
RNF4-210ENST00000508235 ACSM2BQ68CK6 577 aa14.08□□□□□ -0.16
RNF4-210ENST00000508235 PLAG1Q6DJT9 500 aa14.08□□□□□ -0.16
RNF4-210ENST00000508235 MRM1Q6IN84 353 aaKnown RBP14.08□□□□□ -0.16
RNF4-210ENST00000508235 JMJD6Q6NYC1 403 aaPredicted RBP14.08□□□□□ -0.16
RNF4-210ENST00000508235 PAPD4Q6PIY7 484 aaKnown RBP14.08□□□□□ -0.16
RNF4-210ENST00000508235 ZCCHC23Q6ZST2 131 aa14.08□□□□□ -0.16
RNF4-210ENST00000508235 PARP9Q8IXQ6 854 aa14.08□□□□□ -0.16
RNF4-210ENST00000508235 CLYBLQ8N0X4 340 aa14.08□□□□□ -0.16
RNF4-210ENST00000508235 ANKRD42Q8N9B4 389 aa14.08□□□□□ -0.16
RNF4-210ENST00000508235 FDCSPQ8NFU4 85 aa14.08□□□□□ -0.16
RNF4-210ENST00000508235 OR6Y1Q8NGX8 325 aa14.08□□□□□ -0.16
RNF4-210ENST00000508235 CHTF18Q8WVB6 975 aa14.08□□□□□ -0.16
RNF4-210ENST00000508235 TSLPQ969D9 159 aa14.08□□□□□ -0.16
RNF4-210ENST00000508235 THOC3Q96J01 351 aaKnown RBP14.08□□□□□ -0.16
RNF4-210ENST00000508235 SHCBP1LQ9BZQ2 653 aa14.08□□□□□ -0.16
RNF4-210ENST00000508235 LHPPQ9H008 270 aa14.08□□□□□ -0.16
RNF4-210ENST00000508235 MLXIPLQ9NP71 852 aa14.08□□□□□ -0.16
RNF4-210ENST00000508235 PFDN4Q9NQP4 134 aa14.08□□□□□ -0.16
RNF4-210ENST00000508235 NECTIN3Q9NQS3 549 aa14.08□□□□□ -0.16
RNF4-210ENST00000508235 C5AR2Q9P296 337 aa14.08□□□□□ -0.16
RNF4-210ENST00000508235 ZNF451Q9Y4E5 1061 aa14.08□□□□□ -0.16
RNF4-210ENST00000508235 ASB4Q9Y574 426 aa14.08□□□□□ -0.16
RNF4-210ENST00000508235 CFAP47Q6ZTR5 3102 aa14.08□□□□□ -0.16
RNF4-210ENST00000508235 WDR91A4D1P6 747 aa14.07□□□□□ -0.16
RNF4-210ENST00000508235 SLC28A1O00337 649 aa14.07□□□□□ -0.16
RNF4-210ENST00000508235 RGS14O43566 566 aa14.07□□□□□ -0.16
RNF4-210ENST00000508235 TMPRSS11DO60235 418 aa14.07□□□□□ -0.16
RNF4-210ENST00000508235 HSPA4LO95757 839 aa14.07□□□□□ -0.16
RNF4-210ENST00000508235 CHRNGP07510 517 aa14.07□□□□□ -0.16
RNF4-210ENST00000508235 PRR35P0CG20 571 aa14.07□□□□□ -0.16
RNF4-210ENST00000508235 NR2F6P10588 404 aa14.07□□□□□ -0.16
RNF4-210ENST00000508235 TPP2P29144 1249 aaPredicted RBP14.07□□□□□ -0.16
RNF4-210ENST00000508235 HTR6P50406 440 aa14.07□□□□□ -0.16
RNF4-210ENST00000508235 HNRNPH2P55795 449 aaKnown RBP14.07□□□□□ -0.16
RNF4-210ENST00000508235 TBL3Q12788 808 aaKnown RBP14.07□□□□□ -0.16
RNF4-210ENST00000508235 MPP2Q14168 576 aa14.07□□□□□ -0.16
RNF4-210ENST00000508235 TERF2Q15554 542 aa14.07□□□□□ -0.16
RNF4-210ENST00000508235 CHI3L2Q15782 390 aa14.07□□□□□ -0.16
RNF4-210ENST00000508235 BTBD16Q32M84 506 aa14.07□□□□□ -0.16
RNF4-210ENST00000508235 SPDYAQ5MJ70 313 aa14.07□□□□□ -0.16
RNF4-210ENST00000508235 AGAP7PQ5VUJ5 663 aa14.07□□□□□ -0.16
RNF4-210ENST00000508235 CLEC6AQ6EIG7 209 aa14.07□□□□□ -0.16
RNF4-210ENST00000508235 C1orf52Q8N6N3 182 aaKnown RBP14.07□□□□□ -0.16
RNF4-210ENST00000508235 M1APQ8TC57 530 aa14.07□□□□□ -0.16
RNF4-210ENST00000508235 TM9SF4Q92544 642 aa14.07□□□□□ -0.16
RNF4-210ENST00000508235 METTL2AQ96IZ6 378 aaKnown RBP14.07□□□□□ -0.16
RNF4-210ENST00000508235 ATP6V1G3Q96LB4 118 aa14.07□□□□□ -0.16
RNF4-210ENST00000508235 IMMP1LQ96LU5 166 aa14.07□□□□□ -0.16
RNF4-210ENST00000508235 AGAP4Q96P64 663 aa14.07□□□□□ -0.16
RNF4-210ENST00000508235 SMAD5Q99717 465 aaKnown RBP14.07□□□□□ -0.16
RNF4-210ENST00000508235 PAIP2Q9BPZ3 127 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms