RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 PCYOX1Q9UHG3 505 aa5.88□□□□□ -1.47
HDAC3-206ENST00000471968 CAPN11Q9UMQ6 739 aa5.88□□□□□ -1.47
HDAC3-206ENST00000471968 PKP3Q9Y446 797 aa5.88□□□□□ -1.47
HDAC3-206ENST00000471968 FKBP7Q9Y680 259 aa5.88□□□□□ -1.47
HDAC3-206ENST00000471968 TCRBV16S1A1N1A0A5B0 115 aa5.87□□□□□ -1.47
HDAC3-206ENST00000471968 DPRXA6NFQ7 191 aa5.87□□□□□ -1.47
HDAC3-206ENST00000471968 EMC8O43402 210 aa5.87□□□□□ -1.47
HDAC3-206ENST00000471968 LILRA1O75019 489 aa5.87□□□□□ -1.47
HDAC3-206ENST00000471968 GPC4O75487 556 aa5.87□□□□□ -1.47
HDAC3-206ENST00000471968 SRP72O76094 671 aaKnown RBP5.87□□□□□ -1.47
HDAC3-206ENST00000471968 CLDN9O95484 217 aa5.87□□□□□ -1.47
HDAC3-206ENST00000471968 NDST3O95803 873 aa5.87□□□□□ -1.47
HDAC3-206ENST00000471968 ACTL6AO96019 429 aa5.87□□□□□ -1.47
HDAC3-206ENST00000471968 AVPP01185 164 aa5.87□□□□□ -1.47
HDAC3-206ENST00000471968 RNASE1P07998 156 aaKnown RBP5.87□□□□□ -1.47
HDAC3-206ENST00000471968 PTPN3P26045 913 aa5.87□□□□□ -1.47
HDAC3-206ENST00000471968 CMPK1P30085 196 aa5.87□□□□□ -1.47
HDAC3-206ENST00000471968 CSE1LP55060 971 aaKnown RBP5.87□□□□□ -1.47
HDAC3-206ENST00000471968 JAM2P57087 298 aa5.87□□□□□ -1.47
HDAC3-206ENST00000471968 RPL7AP62424 266 aaKnown RBP5.87□□□□□ -1.47
HDAC3-206ENST00000471968 STIM1Q13586 685 aa5.87□□□□□ -1.47
HDAC3-206ENST00000471968 SYTL3Q4VX76 610 aa5.87□□□□□ -1.47
HDAC3-206ENST00000471968 OXLD1Q5BKU9 147 aa5.87□□□□□ -1.47
HDAC3-206ENST00000471968 QSOX2Q6ZRP7 698 aa5.87□□□□□ -1.47
HDAC3-206ENST00000471968 GLT6D1Q7Z4J2 308 aa5.87□□□□□ -1.47
HDAC3-206ENST00000471968 LDB1Q86U70 411 aaPredicted RBP5.87□□□□□ -1.47
HDAC3-206ENST00000471968 PLD3Q8IV08 490 aa5.87□□□□□ -1.47
HDAC3-206ENST00000471968 DCUN1D3Q8IWE4 304 aa5.87□□□□□ -1.47
HDAC3-206ENST00000471968 FAM71AQ8IYT1 594 aa5.87□□□□□ -1.47
HDAC3-206ENST00000471968 FBXL14Q8N1E6 418 aa5.87□□□□□ -1.47
HDAC3-206ENST00000471968 CLDN19Q8N6F1 224 aa5.87□□□□□ -1.47
HDAC3-206ENST00000471968 TEX29Q8N6K0 151 aa5.87□□□□□ -1.47
HDAC3-206ENST00000471968 PPHLN1Q8NEY8 458 aaKnown RBP5.87□□□□□ -1.47
HDAC3-206ENST00000471968 MUC7Q8TAX7 377 aa5.87□□□□□ -1.47
HDAC3-206ENST00000471968 BLOC1S5Q8TDH9 187 aa5.87□□□□□ -1.47
HDAC3-206ENST00000471968 PAQR8Q8TEZ7 354 aa5.87□□□□□ -1.47
HDAC3-206ENST00000471968 ATL1Q8WXF7 558 aa5.87□□□□□ -1.47
HDAC3-206ENST00000471968 S100PBPQ96BU1 408 aa5.87□□□□□ -1.47
HDAC3-206ENST00000471968 ZNF597Q96LX8 424 aa5.87□□□□□ -1.47
HDAC3-206ENST00000471968 C1orf147Q96MC9 270 aaPredicted RBP5.87□□□□□ -1.47
HDAC3-206ENST00000471968 COL21A1Q96P44 957 aa5.87□□□□□ -1.47
HDAC3-206ENST00000471968 LRRC37BQ96QE4 947 aa5.87□□□□□ -1.47
HDAC3-206ENST00000471968 OCSTAMPQ9BR26 566 aa5.87□□□□□ -1.47
HDAC3-206ENST00000471968 TRABDQ9H4I3 376 aa5.87□□□□□ -1.47
HDAC3-206ENST00000471968 FAM96AQ9H5X1 160 aa5.87□□□□□ -1.47
HDAC3-206ENST00000471968 ZMAT3Q9HA38 289 aaKnown RBP5.87□□□□□ -1.47
HDAC3-206ENST00000471968 NECTIN3Q9NQS3 549 aa5.87□□□□□ -1.47
HDAC3-206ENST00000471968 PNO1Q9NRX1 252 aaKnown RBP5.87□□□□□ -1.47
HDAC3-206ENST00000471968 SMC3Q9UQE7 1217 aa5.87□□□□□ -1.47
HDAC3-206ENST00000471968 NAALAD2Q9Y3Q0 740 aa5.87□□□□□ -1.47
HDAC3-206ENST00000471968 UQCRHLA0A096LP55 91 aa5.86□□□□□ -1.47
HDAC3-206ENST00000471968 IGKV1-8A0A0C4DH67 115 aa5.86□□□□□ -1.47
HDAC3-206ENST00000471968 KRT87PA6NCN2 255 aa5.86□□□□□ -1.47
HDAC3-206ENST00000471968 SIGLEC16A6NMB1 481 aa5.86□□□□□ -1.47
HDAC3-206ENST00000471968 K7EIL1 84 aa5.86□□□□□ -1.47
HDAC3-206ENST00000471968 PLOD2O00469 737 aa5.86□□□□□ -1.47
HDAC3-206ENST00000471968 TACSTD2P09758 323 aa5.86□□□□□ -1.47
HDAC3-206ENST00000471968 BMP4P12644 408 aa5.86□□□□□ -1.47
HDAC3-206ENST00000471968 PKMP14618 531 aaKnown RBP5.86□□□□□ -1.47
HDAC3-206ENST00000471968 DESP17661 470 aa5.86□□□□□ -1.47
HDAC3-206ENST00000471968 ADRA2CP18825 462 aa5.86□□□□□ -1.47
HDAC3-206ENST00000471968 FPR2P25090 351 aa5.86□□□□□ -1.47
HDAC3-206ENST00000471968 RPL21P46778 160 aaKnown RBP5.86□□□□□ -1.47
HDAC3-206ENST00000471968 ZNF135P52742 658 aaPredicted RBP5.86□□□□□ -1.47
HDAC3-206ENST00000471968 OLR1P78380 273 aa5.86□□□□□ -1.47
HDAC3-206ENST00000471968 OGDHQ02218 1023 aa5.86□□□□□ -1.47
HDAC3-206ENST00000471968 TYRO3Q06418 890 aa5.86□□□□□ -1.47
HDAC3-206ENST00000471968 BAMBIQ13145 260 aa5.86□□□□□ -1.47
HDAC3-206ENST00000471968 RUNX2Q13950 521 aa5.86□□□□□ -1.47
HDAC3-206ENST00000471968 PIGHQ14442 188 aaPredicted RBP5.86□□□□□ -1.47
HDAC3-206ENST00000471968 HLXQ14774 488 aaPredicted RBP5.86□□□□□ -1.47
HDAC3-206ENST00000471968 DBN1Q16643 649 aa5.86□□□□□ -1.47
HDAC3-206ENST00000471968 C2orf68Q2NKX9 166 aa5.86□□□□□ -1.47
HDAC3-206ENST00000471968 DNAJC21Q5F1R6 531 aaKnown RBP5.86□□□□□ -1.47
HDAC3-206ENST00000471968 UGT2A3Q6UWM9 527 aa5.86□□□□□ -1.47
HDAC3-206ENST00000471968 SYT10Q6XYQ8 523 aa5.86□□□□□ -1.47
HDAC3-206ENST00000471968 HSDL2Q6YN16 418 aa5.86□□□□□ -1.47
HDAC3-206ENST00000471968 SLCO4C1Q6ZQN7 724 aa5.86□□□□□ -1.47
HDAC3-206ENST00000471968 SPATC1Q76KD6 591 aa5.86□□□□□ -1.47
HDAC3-206ENST00000471968 YRDCQ86U90 279 aaKnown RBP5.86□□□□□ -1.47
HDAC3-206ENST00000471968 LRRC49Q8IUZ0 686 aa5.86□□□□□ -1.47
HDAC3-206ENST00000471968 FAM13CQ8NE31 585 aa5.86□□□□□ -1.47
HDAC3-206ENST00000471968 SLC25A28Q96A46 364 aa5.86□□□□□ -1.47
HDAC3-206ENST00000471968 NXNL1Q96CM4 212 aa5.86□□□□□ -1.47
HDAC3-206ENST00000471968 GNRHR2Q96P88 292 aa5.86□□□□□ -1.47
HDAC3-206ENST00000471968 SERINC2Q96SA4 455 aa5.86□□□□□ -1.47
HDAC3-206ENST00000471968 FICDQ9BVA6 458 aa5.86□□□□□ -1.47
HDAC3-206ENST00000471968 SAP130Q9H0E3 1048 aa5.86□□□□□ -1.47
HDAC3-206ENST00000471968 UBQLN3Q9H347 655 aa5.86□□□□□ -1.47
HDAC3-206ENST00000471968 BEX1Q9HBH7 125 aa5.86□□□□□ -1.47
HDAC3-206ENST00000471968 MRPS30Q9NP92 439 aaKnown RBP5.86□□□□□ -1.47
HDAC3-206ENST00000471968 FKBPLQ9UIM3 349 aa5.86□□□□□ -1.47
HDAC3-206ENST00000471968 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.86□□□□□ -1.47
HDAC3-206ENST00000471968 CORINQ9Y5Q5 1042 aa5.86□□□□□ -1.47
HDAC3-206ENST00000471968 U3KQK5 164 aa5.86□□□□□ -1.47
HDAC3-206ENST00000471968 SCN3AQ9NY46 2000 aa5.86□□□□□ -1.47
HDAC3-206ENST00000471968 IGKV3D-11A0A0A0MRZ8 115 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 GOLGA6L10A0A0M3HER8 536 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 A0A1B0GUS0 222 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 A0A1W2PPV9 198 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms