RNA–Protein interactions for RNA: ENST00000424702.1

LSM8-204, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 4,030 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-204ENST00000424702 MAP3K3Q99759 626 aa6.9□□□□□ -1.3
LSM8-204ENST00000424702 BDH2Q9BUT1 245 aa6.9□□□□□ -1.3
LSM8-204ENST00000424702 CAAP1Q9H8G2 361 aa6.9□□□□□ -1.3
LSM8-204ENST00000424702 CUEDC1Q9NWM3 386 aaPredicted RBP6.9□□□□□ -1.3
LSM8-204ENST00000424702 FBXW2Q9UKT8 454 aa6.9□□□□□ -1.3
LSM8-204ENST00000424702 FAM32AQ9Y421 112 aaKnown RBP6.9□□□□□ -1.3
LSM8-204ENST00000424702 A0A096LPI6 279 aa6.9□□□□□ -1.31
LSM8-204ENST00000424702 A0A1W2PRB8 838 aa6.9□□□□□ -1.31
LSM8-204ENST00000424702 HYKKA2RU49 373 aa6.9□□□□□ -1.31
LSM8-204ENST00000424702 D6RAR5 112 aa6.9□□□□□ -1.31
LSM8-204ENST00000424702 PDPK1O15530 556 aa6.9□□□□□ -1.31
LSM8-204ENST00000424702 HNRNPRO43390 633 aaKnown RBP6.9□□□□□ -1.31
LSM8-204ENST00000424702 BRINP1O60477 761 aa6.9□□□□□ -1.31
LSM8-204ENST00000424702 SCRG1O75711 98 aa6.9□□□□□ -1.31
LSM8-204ENST00000424702 SCELO95171 688 aa6.9□□□□□ -1.31
LSM8-204ENST00000424702 GPIP06744 558 aa6.9□□□□□ -1.31
LSM8-204ENST00000424702 UMPSP11172 480 aa6.9□□□□□ -1.31
LSM8-204ENST00000424702 NT5EP21589 574 aa6.9□□□□□ -1.31
LSM8-204ENST00000424702 ARFIP1P53367 373 aa6.9□□□□□ -1.31
LSM8-204ENST00000424702 LIMK1P53667 647 aa6.9□□□□□ -1.31
LSM8-204ENST00000424702 PRR5P85299 388 aa6.9□□□□□ -1.31
LSM8-204ENST00000424702 IL11RAQ14626 422 aa6.9□□□□□ -1.31
LSM8-204ENST00000424702 PAGE3Q5JUK9 113 aa6.9□□□□□ -1.31
LSM8-204ENST00000424702 TCEAL6Q6IPX3 200 aa6.9□□□□□ -1.31
LSM8-204ENST00000424702 ZBTB49Q6ZSB9 765 aa6.9□□□□□ -1.31
LSM8-204ENST00000424702 MSANTD1Q6ZTZ1 278 aa6.9□□□□□ -1.31
LSM8-204ENST00000424702 CLEC4FQ8N1N0 589 aa6.9□□□□□ -1.31
LSM8-204ENST00000424702 OR7A2PQ8NGA2 310 aa6.9□□□□□ -1.31
LSM8-204ENST00000424702 OR8J3Q8NGG0 315 aa6.9□□□□□ -1.31
LSM8-204ENST00000424702 BAHD1Q8TBE0 780 aaPredicted RBP6.9□□□□□ -1.31
LSM8-204ENST00000424702 PNPT1Q8TCS8 783 aaKnown RBP6.9□□□□□ -1.31
LSM8-204ENST00000424702 TCEAL3Q969E4 200 aa6.9□□□□□ -1.31
LSM8-204ENST00000424702 RAB33BQ9H082 229 aa6.9□□□□□ -1.31
LSM8-204ENST00000424702 ZNF385DQ9H6B1 395 aa6.9□□□□□ -1.31
LSM8-204ENST00000424702 CUTCQ9NTM9 273 aa6.9□□□□□ -1.31
LSM8-204ENST00000424702 UCKL1Q9NWZ5 548 aa6.9□□□□□ -1.31
LSM8-204ENST00000424702 ADPRHL2Q9NX46 363 aa6.9□□□□□ -1.31
LSM8-204ENST00000424702 ASIC5Q9NY37 505 aa6.9□□□□□ -1.31
LSM8-204ENST00000424702 ZNF624Q9P2J8 865 aaPredicted RBP6.9□□□□□ -1.31
LSM8-204ENST00000424702 MCM8Q9UJA3 840 aa6.9□□□□□ -1.31
LSM8-204ENST00000424702 RPS6KA6Q9UK32 745 aa6.9□□□□□ -1.31
LSM8-204ENST00000424702 WDR37Q9Y2I8 494 aa6.9□□□□□ -1.31
LSM8-204ENST00000424702 LNP1A1A4G5 178 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 TTC36A6NLP5 189 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 AGRPO00253 132 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 CLIC1O00299 241 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 STATHP02808 62 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 ZNF23P17027 643 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 PSMD4P55036 377 aaKnown RBP6.89□□□□□ -1.31
LSM8-204ENST00000424702 RELAQ04206 551 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 MTX3Q5HYI7 312 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 DEPDC1Q5TB30 811 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 TTLL10Q6ZVT0 673 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 TMPRSS12Q86WS5 348 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 TICAM1Q8IUC6 712 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 RIT1Q92963 219 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 OR4K3Q96R72 315 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 NPLQ9BXD5 320 aaPredicted RBP6.89□□□□□ -1.31
LSM8-204ENST00000424702 ACTL8Q9H568 366 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 EXD2Q9NVH0 621 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 ACTR3BQ9P1U1 418 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 C1orf226A1L170 272 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 MYO1GB0I1T2 1018 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 PLD2O14939 933 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 SCAMP2O15127 329 aaKnown RBP6.89□□□□□ -1.31
LSM8-204ENST00000424702 NOBOXO60393 691 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 AGR2O95994 175 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 PRR35P0CG20 571 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 CEACAM1P13688 526 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 UQCRBP14927 111 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 NCK1P16333 377 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 SLC6A2P23975 617 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 RAB8AP61006 207 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.89□□□□□ -1.31
LSM8-204ENST00000424702 ANKRD26P1Q6NSI1 321 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 RNF165Q6ZSG1 346 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 RETREG3Q86VR2 466 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 ZNF740Q8NDX6 193 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 PATE1Q8WXA2 126 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 DAZLQ92904 295 aaKnown RBP6.89□□□□□ -1.31
LSM8-204ENST00000424702 MOAP1Q96BY2 351 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 MTERF3Q96E29 417 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 ZNF184Q99676 751 aaPredicted RBP6.89□□□□□ -1.31
LSM8-204ENST00000424702 NDEL1Q9GZM8 345 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 SEMA6AQ9H2E6 1030 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 CLMPQ9H6B4 373 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 ZNF304Q9HCX3 659 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 MKKSQ9NPJ1 570 aaPredicted RBP6.89□□□□□ -1.31
LSM8-204ENST00000424702 DDX18Q9NVP1 670 aaKnown RBP6.89□□□□□ -1.31
LSM8-204ENST00000424702 KLHL28Q9NXS3 571 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 SCOCQ9UIL1 159 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 PRORSD1PA6NEY8 169 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 SAC3D1A6NKF1 404 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 H0YGG7 62 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 RTCAO00442 366 aaKnown RBP6.89□□□□□ -1.31
LSM8-204ENST00000424702 SLC30A4O14863 429 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 ARPC2O15144 300 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 HOXB6P17509 224 aaKnown RBP6.89□□□□□ -1.31
LSM8-204ENST00000424702 ATP6V1B2P21281 511 aa6.89□□□□□ -1.31
LSM8-204ENST00000424702 MPIP34949 423 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms