RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 KLHL6Q8WZ60 621 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 TESCQ96BS2 214 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 EID2BQ96D98 161 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 MAPKAP1Q9BPZ7 522 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 OR51I1Q9H343 314 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 GIN1Q9NXP7 522 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 FZD6O60353 706 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 VNN2O95498 520 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 IRS1P35568 1242 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 PRLHRP49683 370 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 SKP1P63208 163 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 PCDH1Q08174 1060 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 CBLBQ13191 982 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 RUNX3Q13761 415 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 CST6Q15828 149 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 C5orf22Q49AR2 442 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 DDI2Q5TDH0 399 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 ADNP2Q6IQ32 1131 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 KLHL17Q6TDP4 642 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 SERPINA11Q86U17 422 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 SLC22A16Q86VW1 577 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 SLC30A8Q8IWU4 369 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 PRSS58Q8IYP2 241 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 PAK1IP1Q9NWT1 392 aaPredicted RBP8.09□□□□□ -1.11
PTPRK-206ENST00000368215 CLDND1Q9NY35 253 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 CAB39Q9Y376 341 aaPredicted RBP8.09□□□□□ -1.11
PTPRK-206ENST00000368215 PEX16Q9Y5Y5 336 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 PLXNB2O15031 1838 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 PRR23D1E9PI22 279 aaPredicted RBP8.09□□□□□ -1.11
PTPRK-206ENST00000368215 SLC30A4O14863 429 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 ACOX3O15254 700 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 UGDHO60701 494 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 GPR37L1O60883 481 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 ARHGEF15O94989 841 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 PRR23D2P0DMB1 279 aaPredicted RBP8.09□□□□□ -1.11
PTPRK-206ENST00000368215 CSTF2P33240 577 aaKnown RBP eCLIP8.09□□□□□ -1.115e-7■■■■□ 20.9
PTPRK-206ENST00000368215 CCR2P41597 374 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 PFN3P60673 137 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 COX10Q12887 443 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 EIF4HQ15056 248 aaKnown RBP8.09□□□□□ -1.11
PTPRK-206ENST00000368215 ZNF404Q494X3 552 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 CCDC157Q569K6 752 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 KHDRBS2Q5VWX1 349 aaKnown RBP8.09□□□□□ -1.11
PTPRK-206ENST00000368215 OR4N5Q8IXE1 308 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 SLC6A16Q9GZN6 736 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 TMEM27Q9HBJ8 222 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 SLC25A37Q9NYZ2 338 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 COMMD3Q9UBI1 195 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 PPT2Q9UMR5 302 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 MED16Q9Y2X0 877 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 PARP14Q460N5 1801 aa8.08□□□□□ -1.12
PTPRK-206ENST00000368215 FAM86C2PA6NEL3 165 aa8.08□□□□□ -1.12
PTPRK-206ENST00000368215 TCF3P15923 654 aa8.08□□□□□ -1.12
PTPRK-206ENST00000368215 PGDP52209 483 aa8.08□□□□□ -1.12
PTPRK-206ENST00000368215 BLVRAP53004 296 aa8.08□□□□□ -1.12
PTPRK-206ENST00000368215 SRP54P61011 504 aaKnown RBP8.08□□□□□ -1.12
PTPRK-206ENST00000368215 SELENOWP63302 87 aa8.08□□□□□ -1.12
PTPRK-206ENST00000368215 SLC13A2Q13183 592 aa8.08□□□□□ -1.12
PTPRK-206ENST00000368215 GINS1Q14691 196 aa8.08□□□□□ -1.12
PTPRK-206ENST00000368215 SLC5A12Q1EHB4 618 aa8.08□□□□□ -1.12
PTPRK-206ENST00000368215 ITPRIPL2Q3MIP1 535 aa8.08□□□□□ -1.12
PTPRK-206ENST00000368215 TMEM107Q6UX40 140 aa8.08□□□□□ -1.12
PTPRK-206ENST00000368215 MSANTD1Q6ZTZ1 278 aa8.08□□□□□ -1.12
PTPRK-206ENST00000368215 CEP68Q76N32 757 aa8.08□□□□□ -1.12
PTPRK-206ENST00000368215 TSPYL5Q86VY4 417 aaPredicted RBP8.08□□□□□ -1.12
PTPRK-206ENST00000368215 MEX3DQ86XN8 651 aaKnown RBP8.08□□□□□ -1.12
PTPRK-206ENST00000368215 FAM46DQ8NEK8 389 aa8.08□□□□□ -1.12
PTPRK-206ENST00000368215 FNDC8Q8TC99 324 aa8.08□□□□□ -1.12
PTPRK-206ENST00000368215 RBM18Q96H35 190 aaKnown RBP8.08□□□□□ -1.12
PTPRK-206ENST00000368215 ZSWIM3Q96MP5 696 aa8.08□□□□□ -1.12
PTPRK-206ENST00000368215 CUEDC1Q9NWM3 386 aaPredicted RBP8.08□□□□□ -1.12
PTPRK-206ENST00000368215 CALML5Q9NZT1 146 aa8.08□□□□□ -1.12
PTPRK-206ENST00000368215 KLHL42Q9P2K6 505 aa8.08□□□□□ -1.12
PTPRK-206ENST00000368215 ACSL5Q9ULC5 683 aa8.08□□□□□ -1.12
PTPRK-206ENST00000368215 ARID1BQ8NFD5 2236 aaPredicted RBP8.08□□□□□ -1.12
PTPRK-206ENST00000368215 CCDC182A6NF36 153 aa8.08□□□□□ -1.12
PTPRK-206ENST00000368215 BOLA2-SMG1P6H3BVE0 249 aa8.08□□□□□ -1.12
PTPRK-206ENST00000368215 J3KTA2 159 aa8.08□□□□□ -1.12
PTPRK-206ENST00000368215 KLK8O60259 260 aa8.08□□□□□ -1.12
PTPRK-206ENST00000368215 TYRP1P17643 537 aa8.08□□□□□ -1.12
PTPRK-206ENST00000368215 ALAS2P22557 587 aa8.08□□□□□ -1.12
PTPRK-206ENST00000368215 CLCN2P51788 898 aa8.08□□□□□ -1.12
PTPRK-206ENST00000368215 DEFB134Q4QY38 66 aa8.08□□□□□ -1.12
PTPRK-206ENST00000368215 C10orf62Q5T681 223 aaPredicted RBP8.08□□□□□ -1.12
PTPRK-206ENST00000368215 CYHR1Q6ZMK1 362 aa8.08□□□□□ -1.12
PTPRK-206ENST00000368215 AKAP14Q86UN6 197 aa8.08□□□□□ -1.12
PTPRK-206ENST00000368215 L3MBTL4Q8NA19 623 aa8.08□□□□□ -1.12
PTPRK-206ENST00000368215 ABHD11Q8NFV4 315 aa8.08□□□□□ -1.12
PTPRK-206ENST00000368215 OR10H4Q8NGA5 316 aa8.08□□□□□ -1.12
PTPRK-206ENST00000368215 GRHL3Q8TE85 626 aa8.08□□□□□ -1.12
PTPRK-206ENST00000368215 SETD7Q8WTS6 366 aaKnown RBP8.08□□□□□ -1.12
PTPRK-206ENST00000368215 FGF13Q92913 245 aa8.08□□□□□ -1.12
PTPRK-206ENST00000368215 HHIPL1Q96JK4 782 aa8.08□□□□□ -1.12
PTPRK-206ENST00000368215 VN1R3Q9BXE9 311 aa8.08□□□□□ -1.12
PTPRK-206ENST00000368215 RBCK1Q9BYM8 510 aa8.08□□□□□ -1.12
PTPRK-206ENST00000368215 BRF2Q9HAW0 419 aa8.08□□□□□ -1.12
PTPRK-206ENST00000368215 WBP11Q9Y2W2 641 aaKnown RBP8.08□□□□□ -1.12
PTPRK-206ENST00000368215 N6AMT1Q9Y5N5 214 aa8.08□□□□□ -1.12
PTPRK-206ENST00000368215 STON1Q9Y6Q2 735 aa8.08□□□□□ -1.12
PTPRK-206ENST00000368215 K7ESM1 405 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms