RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 GHDCQ8N2G8 530 aa16.4■□□□□ 0.22
TRAPPC11-201ENST00000334690 OR2AJ1Q8NGZ0 328 aa16.4■□□□□ 0.22
TRAPPC11-201ENST00000334690 SUN3Q8TAQ9 357 aa16.4■□□□□ 0.22
TRAPPC11-201ENST00000334690 PNO1Q9NRX1 252 aaKnown RBP16.4■□□□□ 0.22
TRAPPC11-201ENST00000334690 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.4■□□□□ 0.22
TRAPPC11-201ENST00000334690 TBC1D24Q9ULP9 559 aa16.4■□□□□ 0.22
TRAPPC11-201ENST00000334690 SOX30O94993 753 aa16.39■□□□□ 0.21
TRAPPC11-201ENST00000334690 SLC36A3Q495N2 470 aa16.39■□□□□ 0.21
TRAPPC11-201ENST00000334690 CLLU1OSQ5K130 101 aa16.39■□□□□ 0.21
TRAPPC11-201ENST00000334690 MCEMP1Q8IX19 187 aa16.39■□□□□ 0.21
TRAPPC11-201ENST00000334690 PHOX2BQ99453 314 aa16.39■□□□□ 0.21
TRAPPC11-201ENST00000334690 SLC29A1Q99808 456 aa16.39■□□□□ 0.21
TRAPPC11-201ENST00000334690 FUNDC2Q9BWH2 189 aa16.39■□□□□ 0.21
TRAPPC11-201ENST00000334690 GMEB1Q9Y692 573 aa16.39■□□□□ 0.21
TRAPPC11-201ENST00000334690 ARNTLO00327 626 aa16.39■□□□□ 0.21
TRAPPC11-201ENST00000334690 SRCP12931 536 aa16.39■□□□□ 0.21
TRAPPC11-201ENST00000334690 DCTP40126 519 aa16.39■□□□□ 0.21
TRAPPC11-201ENST00000334690 MLLT3P42568 568 aaPredicted RBP16.39■□□□□ 0.21
TRAPPC11-201ENST00000334690 OR2T33Q8NG76 320 aa16.39■□□□□ 0.21
TRAPPC11-201ENST00000334690 NRG4Q8WWG1 115 aa16.39■□□□□ 0.21
TRAPPC11-201ENST00000334690 BCL7BQ9BQE9 202 aa16.39■□□□□ 0.21
TRAPPC11-201ENST00000334690 HERC2P3Q9BVR0 1158 aa16.39■□□□□ 0.21
TRAPPC11-201ENST00000334690 HCN3Q9P1Z3 774 aa16.39■□□□□ 0.21
TRAPPC11-201ENST00000334690 KLHL42Q9P2K6 505 aa16.39■□□□□ 0.21
TRAPPC11-201ENST00000334690 ST14Q9Y5Y6 855 aa16.39■□□□□ 0.21
TRAPPC11-201ENST00000334690 TSPAN9O75954 239 aa16.39■□□□□ 0.21
TRAPPC11-201ENST00000334690 PFKLP17858 780 aa16.39■□□□□ 0.21
TRAPPC11-201ENST00000334690 CD70P32970 193 aa16.39■□□□□ 0.21
TRAPPC11-201ENST00000334690 NFATC3Q12968 1075 aa16.39■□□□□ 0.21
TRAPPC11-201ENST00000334690 LRP8Q14114 963 aa16.39■□□□□ 0.21
TRAPPC11-201ENST00000334690 UNC5DQ6UXZ4 953 aa16.39■□□□□ 0.21
TRAPPC11-201ENST00000334690 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.39■□□□□ 0.213e-8■■■■■ 34.9
TRAPPC11-201ENST00000334690 F2RL3Q96RI0 385 aa16.39■□□□□ 0.21
TRAPPC11-201ENST00000334690 XKR8Q9H6D3 395 aa16.39■□□□□ 0.21
TRAPPC11-201ENST00000334690 RGS17Q9UGC6 210 aaPredicted RBP16.39■□□□□ 0.21
TRAPPC11-201ENST00000334690 PCDHB14Q9Y5E9 798 aa16.39■□□□□ 0.21
TRAPPC11-201ENST00000334690 MYH9P35579 1960 aaKnown RBP16.39■□□□□ 0.21
TRAPPC11-201ENST00000334690 B4GALT2O60909 372 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 SLC16A8O95907 504 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 LAMP1P11279 417 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 MAPK3P27361 379 aaPredicted RBP16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 CD47Q08722 323 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 FAM189A2Q15884 450 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 CYP27C1Q4G0S4 372 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 DPY19L2P1Q6NXN4 242 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 SLC29A4Q7RTT9 530 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 ZNF550Q7Z398 422 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 ADGRG5Q8IZF4 528 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 RDH14Q9HBH5 336 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 SOBPA7XYQ1 873 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 PLOD2O00469 737 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 ADAP00813 363 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 ETFAP13804 333 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 CDKN1CP49918 316 aaPredicted RBP16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 ARHGDIBP52566 201 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 FOXA1P55317 472 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 ZNF648Q5T619 568 aaPredicted RBP16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 CES4AQ5XG92 561 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 RPL13AP3Q6NVV1 102 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 PNPLA1Q8N8W4 532 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 OR13J1Q8NGT2 312 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 CEP76Q8TAP6 659 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 DNAJA4Q8WW22 397 aaPredicted RBP16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 ZNF597Q96LX8 424 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 GAL3ST1Q99999 423 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 SGIP1Q9BQI5 828 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 ZNF224Q9NZL3 707 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 EIF3KQ9UBQ5 218 aaKnown RBP16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 C4AP0C0L4 1744 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 PHC1P78364 1004 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 POU6F2P78424 691 aaPredicted RBP16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 CTC1Q2NKJ3 1217 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 GRHL2Q6ISB3 625 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 VTCN1Q7Z7D3 282 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 CLECL1Q8IZS7 167 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 OR51G2Q8NGK0 314 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 TIGARQ9NQ88 270 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 DZANK1Q9NVP4 752 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 TTC34A8MYJ7 566 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 ZNF701M0R085 212 aaPredicted RBP16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 PCDHGA12O60330 932 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 STSP08842 583 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 HNRNPA0Q13151 305 aaKnown RBP16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 VEZF1Q14119 521 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 AMZ1Q400G9 498 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 SLC35F1Q5T1Q4 408 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 ZNF534Q76KX8 674 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 PRSS48Q7RTY5 328 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 SLC9B2Q86UD5 537 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 YIPF7Q8N8F6 280 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 DENND6BQ8NEG7 585 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 NKD1Q969G9 470 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 IL17FQ96PD4 163 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 ATOH8Q96SQ7 321 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 CST11Q9H112 138 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 ENPP4Q9Y6X5 453 aa16.38■□□□□ 0.21
TRAPPC11-201ENST00000334690 AKAP11Q9UKA4 1901 aa16.37■□□□□ 0.21
TRAPPC11-201ENST00000334690 SORBS2O94875 1100 aaKnown RBP16.37■□□□□ 0.21
TRAPPC11-201ENST00000334690 CSF2RAP15509 400 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms