RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 IL25Q9H293 177 aa15.82■□□□□ 0.12
PTCH1-201ENST00000331920 URB1O60287 2271 aaKnown RBP15.82■□□□□ 0.12
PTCH1-201ENST00000331920 SEC14L5O43304 696 aa15.82■□□□□ 0.12
PTCH1-201ENST00000331920 IL3P08700 152 aa15.82■□□□□ 0.12
PTCH1-201ENST00000331920 PRPS1L1P21108 318 aa15.82■□□□□ 0.12
PTCH1-201ENST00000331920 PRKACGP22612 351 aa15.82■□□□□ 0.12
PTCH1-201ENST00000331920 HERVK_113P63132 956 aa15.82■□□□□ 0.12
PTCH1-201ENST00000331920 FUT10Q6P4F1 479 aa15.82■□□□□ 0.12
PTCH1-201ENST00000331920 GDPD4Q6W3E5 623 aa15.82■□□□□ 0.12
PTCH1-201ENST00000331920 ZNF695Q8IW36 515 aa15.82■□□□□ 0.12
PTCH1-201ENST00000331920 ZNF439Q8NDP4 499 aa15.82■□□□□ 0.12
PTCH1-201ENST00000331920 SLC22A17Q8WUG5 538 aa15.82■□□□□ 0.12
PTCH1-201ENST00000331920 ERVK-6Q9BXR3 956 aa15.82■□□□□ 0.12
PTCH1-201ENST00000331920 MATN3O15232 486 aa15.82■□□□□ 0.12
PTCH1-201ENST00000331920 TREHO43280 583 aa15.82■□□□□ 0.12
PTCH1-201ENST00000331920 PRICKLE3O43900 615 aaPredicted RBP15.82■□□□□ 0.12
PTCH1-201ENST00000331920 FMO6PO60774 539 aa15.82■□□□□ 0.12
PTCH1-201ENST00000331920 ARHGEF15O94989 841 aa15.82■□□□□ 0.12
PTCH1-201ENST00000331920 RAB8AP61006 207 aa15.82■□□□□ 0.12
PTCH1-201ENST00000331920 ZNF641Q96N77 438 aaPredicted RBP15.82■□□□□ 0.12
PTCH1-201ENST00000331920 EFCAB11Q9BUY7 163 aa15.82■□□□□ 0.12
PTCH1-201ENST00000331920 CADM1Q9BY67 442 aaKnown RBP15.82■□□□□ 0.12
PTCH1-201ENST00000331920 A0A1W2PRU2 124 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 OR5H15A6NDH6 313 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 OR5H14A6NHG9 310 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 OR5H1A6NKK0 313 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 DNM1LO00429 736 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 EVI2BP34910 448 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 TAS2R43P59537 309 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 DUOXA1Q1HG43 343 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 DEFB115Q30KQ5 88 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 BCL2L15Q5TBC7 163 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 FAM122CQ6P4D5 195 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 PCED1BQ96HM7 432 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 STRADBQ9C0K7 418 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 A6NHS1 94 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 RPS13P62277 151 aaKnown RBP15.81■□□□□ 0.12
PTCH1-201ENST00000331920 SNRPD2P62316 118 aaKnown RBP15.81■□□□□ 0.12
PTCH1-201ENST00000331920 GKN2Q86XP6 184 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 IL17RCQ8NAC3 791 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 HIPK2Q9H2X6 1198 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 CD93Q9NPY3 652 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 C6orf47O95873 294 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 MMP3P08254 477 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 PTH2RP49190 550 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 FAM69BQ5VUD6 431 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 OR56A1Q8NGH5 318 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 TM9SF4Q92544 642 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 SRA1Q9HD15 236 aaKnown RBP15.81■□□□□ 0.12
PTCH1-201ENST00000331920 GLI2P10070 1586 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 IL7P13232 177 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 CKMT2P17540 419 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 NCS1P62166 190 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 OR5H2Q8NGV7 314 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 DCUN1D4Q92564 292 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 YY2O15391 372 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 SLITRK5O94991 958 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 PRKCAP17252 672 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 PCBP1Q15365 356 aaKnown RBP eCLIP15.81■□□□□ 0.12
PTCH1-201ENST00000331920 P2RY13Q9BPV8 354 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 MTG2Q9H4K7 406 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 RABL2AQ9UBK7 228 aaPredicted RBP15.81■□□□□ 0.12
PTCH1-201ENST00000331920 TRBV2A0A0J9YWF9 115 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 SLC19A2O60779 497 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 GABRA3P34903 492 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 GGT5P36269 586 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 LRRTM4Q86VH4 590 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 PLD5Q8N7P1 536 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 OR56A3Q8NH54 315 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 PLD4Q96BZ4 506 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 MTMR11A4FU01 709 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 CD34P28906 385 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 ERVK-8P63133 956 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 RPLP0P6Q8NHW5 317 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 AKTIPQ9H8T0 292 aa15.81■□□□□ 0.12
PTCH1-201ENST00000331920 SPHKAPQ2M3C7 1700 aa15.8■□□□□ 0.12
PTCH1-201ENST00000331920 ZNF860A6NHJ4 632 aa15.8■□□□□ 0.12
PTCH1-201ENST00000331920 MEIS3P2A8K0S8 358 aa15.8■□□□□ 0.12
PTCH1-201ENST00000331920 ACRP10323 421 aa15.8■□□□□ 0.12
PTCH1-201ENST00000331920 P2RX1P51575 399 aa15.8■□□□□ 0.12
PTCH1-201ENST00000331920 ERVK-25P63136 954 aa15.8■□□□□ 0.12
PTCH1-201ENST00000331920 MEX3BQ6ZN04 569 aaKnown RBP15.8■□□□□ 0.12
PTCH1-201ENST00000331920 TRAM1L1Q8N609 369 aa15.8■□□□□ 0.12
PTCH1-201ENST00000331920 ST6GALNAC5Q9BVH7 336 aa15.8■□□□□ 0.12
PTCH1-201ENST00000331920 ZNF355PQ9NSJ1 428 aa15.8■□□□□ 0.12
PTCH1-201ENST00000331920 PFKLP17858 780 aa15.8■□□□□ 0.12
PTCH1-201ENST00000331920 RPL11P62913 178 aaKnown RBP15.8■□□□□ 0.12
PTCH1-201ENST00000331920 NPRL3Q12980 569 aa15.8■□□□□ 0.12
PTCH1-201ENST00000331920 THOC6Q86W42 341 aaKnown RBP15.8■□□□□ 0.12
PTCH1-201ENST00000331920 LMF1Q96S06 567 aa15.8■□□□□ 0.12
PTCH1-201ENST00000331920 URM1Q9BTM9 101 aaKnown RBP15.8■□□□□ 0.12
PTCH1-201ENST00000331920 SMCO4Q9NRQ5 59 aa15.8■□□□□ 0.12
PTCH1-201ENST00000331920 SARDHQ9UL12 918 aa15.8■□□□□ 0.12
PTCH1-201ENST00000331920 MGAT4BQ9UQ53 548 aa15.8■□□□□ 0.12
PTCH1-201ENST00000331920 NAALAD2Q9Y3Q0 740 aa15.8■□□□□ 0.12
PTCH1-201ENST00000331920 MAFBQ9Y5Q3 323 aaPredicted RBP15.8■□□□□ 0.12
PTCH1-201ENST00000331920 SLC38A8A6NNN8 435 aa15.8■□□□□ 0.12
PTCH1-201ENST00000331920 CAPN5O15484 640 aaPredicted RBP15.8■□□□□ 0.12
PTCH1-201ENST00000331920 NPHS1O60500 1241 aa15.8■□□□□ 0.12
PTCH1-201ENST00000331920 ELK4P28324 431 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms