RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 ANGPTL8Q6UXH0 198 aa17.2■□□□□ 0.34
VIM-201ENST00000224237 IZUMO2Q6UXV1 221 aa17.2■□□□□ 0.34
VIM-201ENST00000224237 OR4N4Q8N0Y3 316 aa17.2■□□□□ 0.34
VIM-201ENST00000224237 ADCY4Q8NFM4 1077 aa17.2■□□□□ 0.34
VIM-201ENST00000224237 SERINC2Q96SA4 455 aa17.2■□□□□ 0.34
VIM-201ENST00000224237 ELF4Q99607 663 aaPredicted RBP17.2■□□□□ 0.34
VIM-201ENST00000224237 RAD21L1Q9H4I0 556 aa17.2■□□□□ 0.34
VIM-201ENST00000224237 SLAMF7Q9NQ25 335 aa17.2■□□□□ 0.34
VIM-201ENST00000224237 C1GALT1Q9NS00 363 aa17.2■□□□□ 0.34
VIM-201ENST00000224237 UTS2RQ9UKP6 389 aa17.2■□□□□ 0.34
VIM-201ENST00000224237 TNRC6BQ9UPQ9 1833 aaKnown RBP17.19■□□□□ 0.34
VIM-201ENST00000224237 A0A1W2PR48 441 aa17.19■□□□□ 0.34
VIM-201ENST00000224237 RHPN2P1A8MT19 583 aa17.19■□□□□ 0.34
VIM-201ENST00000224237 HRO43593 1189 aa17.19■□□□□ 0.34
VIM-201ENST00000224237 KRT75O95678 551 aa17.19■□□□□ 0.34
VIM-201ENST00000224237 NTRK1P04629 796 aa17.19■□□□□ 0.34
VIM-201ENST00000224237 UQCRC2P22695 453 aa17.19■□□□□ 0.34
VIM-201ENST00000224237 SOAT1P35610 550 aa17.19■□□□□ 0.34
VIM-201ENST00000224237 FADDQ13158 208 aa17.19■□□□□ 0.34
VIM-201ENST00000224237 KBTBD2Q8IY47 623 aa17.19■□□□□ 0.34
VIM-201ENST00000224237 ZZZ3Q8IYH5 903 aa17.19■□□□□ 0.34
VIM-201ENST00000224237 CLEC4FQ8N1N0 589 aa17.19■□□□□ 0.34
VIM-201ENST00000224237 ARL10Q8N8L6 244 aa17.19■□□□□ 0.34
VIM-201ENST00000224237 OR52N2Q8NGI0 321 aa17.19■□□□□ 0.34
VIM-201ENST00000224237 ZCCHC10Q8TBK6 192 aa17.19■□□□□ 0.34
VIM-201ENST00000224237 TRAPPC9Q96Q05 1148 aa17.19■□□□□ 0.34
VIM-201ENST00000224237 CCDC3Q9BQI4 270 aa17.19■□□□□ 0.34
VIM-201ENST00000224237 UGT2B28Q9BY64 529 aa17.19■□□□□ 0.34
VIM-201ENST00000224237 NLNQ9BYT8 704 aa17.19■□□□□ 0.34
VIM-201ENST00000224237 CHST8Q9H2A9 424 aa17.19■□□□□ 0.34
VIM-201ENST00000224237 SLC35C2Q9NQQ7 365 aa17.19■□□□□ 0.34
VIM-201ENST00000224237 FSCN3Q9NQT6 498 aa17.19■□□□□ 0.34
VIM-201ENST00000224237 CABIN1Q9Y6J0 2220 aa17.19■□□□□ 0.34
VIM-201ENST00000224237 AIFM1O95831 613 aa17.18■□□□□ 0.34
VIM-201ENST00000224237 CAPNS1P04632 268 aa17.18■□□□□ 0.34
VIM-201ENST00000224237 EIF2S1P05198 315 aaKnown RBP17.18■□□□□ 0.34
VIM-201ENST00000224237 FASP25445 335 aa17.18■□□□□ 0.34
VIM-201ENST00000224237 CHI3L1P36222 383 aaPredicted RBP17.18■□□□□ 0.34
VIM-201ENST00000224237 RXRGP48443 463 aa17.18■□□□□ 0.34
VIM-201ENST00000224237 VAC14Q08AM6 782 aa17.18■□□□□ 0.34
VIM-201ENST00000224237 BNIP3Q12983 259 aa17.18■□□□□ 0.34
VIM-201ENST00000224237 COL9A2Q14055 689 aaPredicted RBP17.18■□□□□ 0.34
VIM-201ENST00000224237 PLK5Q496M5 336 aa17.18■□□□□ 0.34
VIM-201ENST00000224237 ZC3H12BQ5HYM0 836 aaKnown RBP17.18■□□□□ 0.34
VIM-201ENST00000224237 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.18■□□□□ 0.34
VIM-201ENST00000224237 PTOV1Q86YD1 416 aa17.18■□□□□ 0.34
VIM-201ENST00000224237 CSNK1A1LQ8N752 337 aa17.18■□□□□ 0.34
VIM-201ENST00000224237 FAM110BQ8TC76 370 aa17.18■□□□□ 0.34
VIM-201ENST00000224237 TRIM4Q9C037 500 aa17.18■□□□□ 0.34
VIM-201ENST00000224237 CXorf36Q9H7Y0 433 aa17.18■□□□□ 0.34
VIM-201ENST00000224237 DCAF13Q9NV06 445 aaKnown RBP17.18■□□□□ 0.34
VIM-201ENST00000224237 PILRBQ9UKJ0 227 aa17.18■□□□□ 0.34
VIM-201ENST00000224237 DMDP11532 3685 aa17.18■□□□□ 0.34
VIM-201ENST00000224237 PROM1O43490 865 aa17.18■□□□□ 0.34
VIM-201ENST00000224237 SH3BP5O60239 455 aa17.18■□□□□ 0.34
VIM-201ENST00000224237 ALOX12P18054 663 aa17.18■□□□□ 0.34
VIM-201ENST00000224237 NTSP30990 170 aa17.18■□□□□ 0.34
VIM-201ENST00000224237 PI4KAP42356 2102 aa17.18■□□□□ 0.34
VIM-201ENST00000224237 MVDP53602 400 aa17.18■□□□□ 0.34
VIM-201ENST00000224237 VEZF1Q14119 521 aa17.18■□□□□ 0.34
VIM-201ENST00000224237 FAM98BQ52LJ0 330 aaKnown RBP17.18■□□□□ 0.34
VIM-201ENST00000224237 TMEM214Q6NUQ4 689 aaKnown RBP17.18■□□□□ 0.34
VIM-201ENST00000224237 SLC48A1Q6P1K1 146 aa17.18■□□□□ 0.34
VIM-201ENST00000224237 DGLUCYQ7Z3D6 616 aa17.18■□□□□ 0.34
VIM-201ENST00000224237 SLC25A45Q8N413 288 aa17.18■□□□□ 0.34
VIM-201ENST00000224237 NETO1Q8TDF5 533 aa17.18■□□□□ 0.34
VIM-201ENST00000224237 N4BP2L2Q92802 583 aaPredicted RBP17.18■□□□□ 0.34
VIM-201ENST00000224237 SEPHS2Q99611 448 aa17.18■□□□□ 0.34
VIM-201ENST00000224237 MAPKAP1Q9BPZ7 522 aa17.18■□□□□ 0.34
VIM-201ENST00000224237 RAB33BQ9H082 229 aa17.18■□□□□ 0.34
VIM-201ENST00000224237 SEMA6AQ9H2E6 1030 aa17.18■□□□□ 0.34
VIM-201ENST00000224237 IL21RQ9HBE5 538 aa17.18■□□□□ 0.34
VIM-201ENST00000224237 AGPAT4Q9NRZ5 378 aa17.18■□□□□ 0.34
VIM-201ENST00000224237 OLAHQ9NV23 265 aa17.18■□□□□ 0.34
VIM-201ENST00000224237 GPATCH2Q9NW75 528 aa17.18■□□□□ 0.34
VIM-201ENST00000224237 PHF11Q9UIL8 331 aa17.18■□□□□ 0.34
VIM-201ENST00000224237 ACSL6Q9UKU0 697 aa17.18■□□□□ 0.34
VIM-201ENST00000224237 DTNAQ9Y4J8 743 aa17.18■□□□□ 0.34
VIM-201ENST00000224237 SNX8Q9Y5X2 465 aa17.18■□□□□ 0.34
VIM-201ENST00000224237 V9GYQ6 96 aa17.18■□□□□ 0.34
VIM-201ENST00000224237 RNF103-CHMP3A0A140T963 221 aa17.17■□□□□ 0.34
VIM-201ENST00000224237 NUDT21O43809 227 aaKnown RBP17.17■□□□□ 0.34
VIM-201ENST00000224237 B3GALT2O43825 422 aa17.17■□□□□ 0.34
VIM-201ENST00000224237 RAP2AP10114 183 aa17.17■□□□□ 0.34
VIM-201ENST00000224237 HOXB6P17509 224 aaKnown RBP17.17■□□□□ 0.34
VIM-201ENST00000224237 BUD31P41223 144 aaPredicted RBP17.17■□□□□ 0.34
VIM-201ENST00000224237 CRATP43155 626 aa17.17■□□□□ 0.34
VIM-201ENST00000224237 PPM1FP49593 454 aaPredicted RBP17.17■□□□□ 0.34
VIM-201ENST00000224237 HSPB3Q12988 150 aa17.17■□□□□ 0.34
VIM-201ENST00000224237 ADRM1Q16186 407 aa17.17■□□□□ 0.34
VIM-201ENST00000224237 DEFB134Q4QY38 66 aa17.17■□□□□ 0.34
VIM-201ENST00000224237 HMBOX1Q6NT76 420 aa17.17■□□□□ 0.34
VIM-201ENST00000224237 PDSS2Q86YH6 399 aa17.17■□□□□ 0.34
VIM-201ENST00000224237 OR5AK3PQ8NH89 298 aa17.17■□□□□ 0.34
VIM-201ENST00000224237 ZFP28Q8NHY6 868 aa17.17■□□□□ 0.34
VIM-201ENST00000224237 PSMA8Q8TAA3 256 aa17.17■□□□□ 0.34
VIM-201ENST00000224237 UCN3Q969E3 161 aa17.17■□□□□ 0.34
VIM-201ENST00000224237 TCTN2Q96GX1 697 aa17.17■□□□□ 0.34
VIM-201ENST00000224237 RNF145Q96MT1 663 aa17.17■□□□□ 0.34
VIM-201ENST00000224237 MAP3K3Q99759 626 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms