RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 FAM95CA0A1B0GW59 222 aa16.57■□□□□ 0.24
SHKBP1-227ENST00000602011 FAM47E-STBD1D6RA91 191 aa16.57■□□□□ 0.24
SHKBP1-227ENST00000602011 BCKDKO14874 412 aa16.57■□□□□ 0.24
SHKBP1-227ENST00000602011 CLGNO14967 610 aa16.57■□□□□ 0.24
SHKBP1-227ENST00000602011 BANF1O75531 89 aa16.57■□□□□ 0.24
SHKBP1-227ENST00000602011 HOXD4P09016 255 aaPredicted RBP16.57■□□□□ 0.24
SHKBP1-227ENST00000602011 POU4F1Q01851 419 aa16.57■□□□□ 0.24
SHKBP1-227ENST00000602011 TBL3Q12788 808 aaKnown RBP16.57■□□□□ 0.24
SHKBP1-227ENST00000602011 HIST2H2ACQ16777 129 aaPredicted RBP16.57■□□□□ 0.24
SHKBP1-227ENST00000602011 PAGE2BQ5JRK9 111 aa16.57■□□□□ 0.24
SHKBP1-227ENST00000602011 HIST2H2AA3Q6FI13 130 aa16.57■□□□□ 0.24
SHKBP1-227ENST00000602011 TRMT10BQ6PF06 316 aaKnown RBP16.57■□□□□ 0.24
SHKBP1-227ENST00000602011 GK5Q6ZS86 529 aa16.57■□□□□ 0.24
SHKBP1-227ENST00000602011 MDGA2Q7Z553 956 aa16.57■□□□□ 0.24
SHKBP1-227ENST00000602011 SLC35F6Q8N357 371 aa16.57■□□□□ 0.24
SHKBP1-227ENST00000602011 GOLM1Q8NBJ4 401 aa16.57■□□□□ 0.24
SHKBP1-227ENST00000602011 MYRIPQ8NFW9 859 aa16.57■□□□□ 0.24
SHKBP1-227ENST00000602011 DERL2Q9GZP9 239 aa16.57■□□□□ 0.24
SHKBP1-227ENST00000602011 RHOJQ9H4E5 214 aa16.57■□□□□ 0.24
SHKBP1-227ENST00000602011 ZDHHC11Q9H8X9 412 aa16.57■□□□□ 0.24
SHKBP1-227ENST00000602011 PLAC1Q9HBJ0 212 aa16.57■□□□□ 0.24
SHKBP1-227ENST00000602011 KCNN3Q9UGI6 736 aa16.57■□□□□ 0.24
SHKBP1-227ENST00000602011 DAPP1Q9UN19 280 aa16.57■□□□□ 0.24
SHKBP1-227ENST00000602011 CHMP2BQ9UQN3 213 aa16.57■□□□□ 0.24
SHKBP1-227ENST00000602011 SPACA6W5XKT8 324 aa16.57■□□□□ 0.24
SHKBP1-227ENST00000602011 CYR61O00622 381 aa16.56■□□□□ 0.24
SHKBP1-227ENST00000602011 CD1EP15812 388 aa16.56■□□□□ 0.24
SHKBP1-227ENST00000602011 CNR1P21554 472 aa16.56■□□□□ 0.24
SHKBP1-227ENST00000602011 TAS2R39P59534 338 aa16.56■□□□□ 0.24
SHKBP1-227ENST00000602011 PPIAP62937 165 aaKnown RBP16.56■□□□□ 0.24
SHKBP1-227ENST00000602011 PLGLB1Q02325 96 aa16.56■□□□□ 0.24
SHKBP1-227ENST00000602011 STX4Q12846 297 aa16.56■□□□□ 0.24
SHKBP1-227ENST00000602011 SLBPQ14493 270 aaKnown RBP eCLIP16.56■□□□□ 0.24
SHKBP1-227ENST00000602011 TGFBIQ15582 683 aa16.56■□□□□ 0.24
SHKBP1-227ENST00000602011 CES4AQ5XG92 561 aa16.56■□□□□ 0.24
SHKBP1-227ENST00000602011 ABHD17CQ6PCB6 329 aa16.56■□□□□ 0.24
SHKBP1-227ENST00000602011 OPN5Q6U736 354 aa16.56■□□□□ 0.24
SHKBP1-227ENST00000602011 CEP128Q6ZU80 1094 aa16.56■□□□□ 0.24
SHKBP1-227ENST00000602011 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.56■□□□□ 0.24
SHKBP1-227ENST00000602011 CLYBLQ8N0X4 340 aa16.56■□□□□ 0.24
SHKBP1-227ENST00000602011 CCT6BQ92526 530 aa16.56■□□□□ 0.24
SHKBP1-227ENST00000602011 UBE2E3Q969T4 207 aa16.56■□□□□ 0.24
SHKBP1-227ENST00000602011 WDR34Q96EX3 536 aa16.56■□□□□ 0.24
SHKBP1-227ENST00000602011 PTCD3Q96EY7 689 aaKnown RBP16.56■□□□□ 0.24
SHKBP1-227ENST00000602011 TSPAN17Q96FV3 270 aa16.56■□□□□ 0.24
SHKBP1-227ENST00000602011 QRFPRQ96P65 431 aa16.56■□□□□ 0.24
SHKBP1-227ENST00000602011 FAM173AQ9BQD7 235 aa16.56■□□□□ 0.24
SHKBP1-227ENST00000602011 EFCAB11Q9BUY7 163 aa16.56■□□□□ 0.24
SHKBP1-227ENST00000602011 COPS7BQ9H9Q2 264 aaPredicted RBP16.56■□□□□ 0.24
SHKBP1-227ENST00000602011 LYRM4Q9HD34 91 aa16.56■□□□□ 0.24
SHKBP1-227ENST00000602011 IGSF5Q9NSI5 407 aa16.56■□□□□ 0.24
SHKBP1-227ENST00000602011 DNAJC11Q9NVH1 559 aa16.56■□□□□ 0.24
SHKBP1-227ENST00000602011 KCMF1Q9P0J7 381 aa16.56■□□□□ 0.24
SHKBP1-227ENST00000602011 ZNF223Q9UK11 482 aaPredicted RBP16.56■□□□□ 0.24
SHKBP1-227ENST00000602011 IKZF3Q9UKT9 509 aa16.56■□□□□ 0.24
SHKBP1-227ENST00000602011 CLDN16Q9Y5I7 305 aa16.56■□□□□ 0.24
SHKBP1-227ENST00000602011 CTAGE15A4D2H0 777 aa16.55■□□□□ 0.24
SHKBP1-227ENST00000602011 NPEPPSL1A6NEC2 478 aa16.55■□□□□ 0.24
SHKBP1-227ENST00000602011 FIGNL2A6NMB9 653 aa16.55■□□□□ 0.24
SHKBP1-227ENST00000602011 OR2J2O76002 312 aa16.55■□□□□ 0.24
SHKBP1-227ENST00000602011 IFNA16P05015 189 aa16.55■□□□□ 0.24
SHKBP1-227ENST00000602011 HNRNPH1P31943 449 aaKnown RBP16.55■□□□□ 0.24
SHKBP1-227ENST00000602011 KCNC1P48547 511 aa16.55■□□□□ 0.24
SHKBP1-227ENST00000602011 LIM2P55344 173 aa16.55■□□□□ 0.24
SHKBP1-227ENST00000602011 ATP6V0D1P61421 351 aa16.55■□□□□ 0.24
SHKBP1-227ENST00000602011 DR1Q01658 176 aa16.55■□□□□ 0.24
SHKBP1-227ENST00000602011 TSNQ15631 228 aaKnown RBP16.55■□□□□ 0.24
SHKBP1-227ENST00000602011 HYAL4Q2M3T9 481 aa16.55■□□□□ 0.24
SHKBP1-227ENST00000602011 GXYLT1Q4G148 440 aa16.55■□□□□ 0.24
SHKBP1-227ENST00000602011 SULT1C3Q6IMI6 304 aa16.55■□□□□ 0.24
SHKBP1-227ENST00000602011 RTL4Q6ZR62 310 aa16.55■□□□□ 0.24
SHKBP1-227ENST00000602011 CTAGE6Q86UF2 777 aa16.55■□□□□ 0.24
SHKBP1-227ENST00000602011 OR2M7Q8NG81 312 aa16.55■□□□□ 0.24
SHKBP1-227ENST00000602011 OR52N2Q8NGI0 321 aa16.55■□□□□ 0.24
SHKBP1-227ENST00000602011 KCNC2Q96PR1 638 aa16.55■□□□□ 0.24
SHKBP1-227ENST00000602011 TBCDQ9BTW9 1192 aa16.55■□□□□ 0.24
SHKBP1-227ENST00000602011 ALOXE3Q9BYJ1 711 aa16.55■□□□□ 0.24
SHKBP1-227ENST00000602011 AICDAQ9GZX7 198 aa16.55■□□□□ 0.24
SHKBP1-227ENST00000602011 SLC17A6Q9P2U8 582 aa16.55■□□□□ 0.24
SHKBP1-227ENST00000602011 RNF6Q9Y252 685 aa16.55■□□□□ 0.24
SHKBP1-227ENST00000602011 SPG11Q96JI7 2443 aa16.55■□□□□ 0.24
SHKBP1-227ENST00000602011 A0A1B0GVC2 190 aa16.54■□□□□ 0.24
SHKBP1-227ENST00000602011 TMEM200CA6NKL6 621 aa16.54■□□□□ 0.24
SHKBP1-227ENST00000602011 DYRK3O43781 588 aa16.54■□□□□ 0.24
SHKBP1-227ENST00000602011 SUSD5O60279 629 aa16.54■□□□□ 0.24
SHKBP1-227ENST00000602011 STK16O75716 305 aa16.54■□□□□ 0.24
SHKBP1-227ENST00000602011 TOXO94900 526 aa16.54■□□□□ 0.24
SHKBP1-227ENST00000602011 IGHG3P01860 377 aa16.54■□□□□ 0.24
SHKBP1-227ENST00000602011 MSX1P28360 303 aa16.54■□□□□ 0.24
SHKBP1-227ENST00000602011 SERPINB1P30740 379 aa16.54■□□□□ 0.24
SHKBP1-227ENST00000602011 PEX19P40855 299 aa16.54■□□□□ 0.24
SHKBP1-227ENST00000602011 GDF5P43026 501 aa16.54■□□□□ 0.24
SHKBP1-227ENST00000602011 PLA2G16P53816 162 aa16.54■□□□□ 0.24
SHKBP1-227ENST00000602011 GPR85P60893 370 aa16.54■□□□□ 0.24
SHKBP1-227ENST00000602011 TBCCQ15814 346 aa16.54■□□□□ 0.24
SHKBP1-227ENST00000602011 TMEM35AQ53FP2 167 aa16.54■□□□□ 0.24
SHKBP1-227ENST00000602011 IL20RBQ6UXL0 311 aa16.54■□□□□ 0.24
SHKBP1-227ENST00000602011 CYS1Q717R9 158 aa16.54■□□□□ 0.24
SHKBP1-227ENST00000602011 GPSM1Q86YR5 675 aa16.54■□□□□ 0.24
SHKBP1-227ENST00000602011 DMRTC2Q8IXT2 367 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms