RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 RASAL2Q9UJF2 1139 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 LYVE1Q9Y5Y7 322 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 KMT2BQ9UMN6 2715 aaPredicted RBP3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 CACNA1BQ00975 2339 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 GOLGA4Q13439 2230 aaKnown RBP3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 LRRK1Q38SD2 2015 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 COL5A1P20908 1838 aaPredicted RBP3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 IGHV1OR15-9A0A0B4J2B8 117 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 TCRBV21S2A2A0A5A6 115 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 EIF4E1BA6NMX2 242 aaKnown RBP3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 MYO1GB0I1T2 1018 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 AP5Z1O43299 807 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 XPNPEP2O43895 674 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 LETM1O95202 739 aaPredicted RBP3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 KCNK5O95279 499 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 CAVIN2O95810 425 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 IGLV2-11P01706 119 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 HIST1H2ABP04908 130 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 SLC2A3P11169 496 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 ACADMP11310 421 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 KRT5P13647 590 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 UCHL3P15374 230 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 HIST1H2ADP20671 130 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 HLA-FP30511 346 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 OXTRP30559 389 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 PPARGP37231 505 aaPredicted RBP3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 MTIF2P46199 727 aaKnown RBP3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 RXRGP48443 463 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 RGS7P49802 495 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 PLK1P53350 603 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 SNX16P57768 344 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 KDSRQ06136 332 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 ACSM2AQ08AH3 577 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 PDE1CQ14123 709 aaPredicted RBP3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 ZNF234Q14588 700 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 LPAL2Q16609 132 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 TPD52L1Q16890 204 aaPredicted RBP3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 TMEM35AQ53FP2 167 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 FAM133BQ5BKY9 247 aaKnown RBP3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 TCP11X2Q5H9J9 407 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 MS4A13Q5J8X5 152 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 SYPL2Q5VXT5 272 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 NSUN5P2Q63ZY6 315 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 TMEM215Q68D42 235 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 LPCAT2Q7L5N7 544 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 HIST3H2AQ7L7L0 130 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 SLC26A9Q7LBE3 791 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 DGLUCYQ7Z3D6 616 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 RABEPKQ7Z6M1 372 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 SLC9B2Q86UD5 537 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 ADIPOR2Q86V24 386 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 MAP7D3Q8IWC1 876 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 WDTC1Q8N5D0 677 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 ATP6V0D2Q8N8Y2 350 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 HJURPQ8NCD3 748 aaPredicted RBP3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 C1orf131Q8NDD1 294 aaKnown RBP3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 DQX1Q8TE96 717 aaKnown RBP3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 DDI1Q8WTU0 396 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 NT5C3BQ969T7 300 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 PGAP3Q96FM1 320 aaPredicted RBP3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 BTN2A3PQ96KV6 586 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 OR2A14Q96R47 310 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 CPXM1Q96SM3 734 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 PRMT1Q99873 361 aaKnown RBP3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 NCAPGQ9BPX3 1015 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 DDX50Q9BQ39 737 aaKnown RBP3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 KRTAP2-2Q9BYT5 123 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 MIS12Q9H081 205 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 TMEM245Q9H330 911 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 PIGMQ9H3S5 423 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 SEPT11Q9NVA2 429 aaKnown RBP3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 CYTH4Q9UIA0 394 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 DNAJC12Q9UKB3 198 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 CLEC4EQ9ULY5 219 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 SHROOM3Q8TF72 1996 aa3.43□□□□□ -1.86
CKS1BP3-201ENST00000600888 PLXNB3Q9ULL4 1909 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 CXorf51AA0A1B0GTR3 108 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 LNP1A1A4G5 178 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 A8MZ25 164 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 C10orf142B7Z368 130 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 WASH3PC4AMC7 463 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 C16orf97H3BN30 126 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 CDX4O14627 284 aaPredicted RBP3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 CAPN9O14815 690 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 ZNHIT1O43257 154 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 HSF2BPO75031 334 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 WDR1O75083 606 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 LUC7L3O95232 432 aaKnown RBP3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 OR2C1O95371 312 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 LSM8O95777 96 aaKnown RBP3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 TRUB2O95900 331 aaKnown RBP3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 MBD3O95983 291 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 APOEP02649 317 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 ATP5BP06576 529 aaKnown RBP3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 SRPRAP08240 638 aaKnown RBP3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 HMBSP08397 361 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 SERPINF2P08697 491 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 CYP11B1P15538 503 aa3.42□□□□□ -1.86
CKS1BP3-201ENST00000600888 ZNF18P17022 549 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms