RNA–Protein interactions for RNA: ENST00000539241.1

CCND1-204, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-204ENST00000539241 AHRP35869 848 aa13.11□□□□□ -0.31
CCND1-204ENST00000539241 TGFBIQ15582 683 aa13.11□□□□□ -0.31
CCND1-204ENST00000539241 KRTCAP3Q53RY4 240 aa13.11□□□□□ -0.31
CCND1-204ENST00000539241 TECRLQ5HYJ1 363 aa13.11□□□□□ -0.31
CCND1-204ENST00000539241 CDKL4Q5MAI5 379 aa13.11□□□□□ -0.31
CCND1-204ENST00000539241 SLC25A25Q6KCM7 469 aa13.11□□□□□ -0.31
CCND1-204ENST00000539241 QSOX2Q6ZRP7 698 aa13.11□□□□□ -0.31
CCND1-204ENST00000539241 SH2D5Q6ZV89 423 aa13.11□□□□□ -0.31
CCND1-204ENST00000539241 GALNTL5Q7Z4T8 443 aa13.11□□□□□ -0.31
CCND1-204ENST00000539241 TRABD2AQ86V40 505 aa13.11□□□□□ -0.31
CCND1-204ENST00000539241 RPS19BP1Q86WX3 136 aaKnown RBP13.11□□□□□ -0.31
CCND1-204ENST00000539241 KIF2BQ8N4N8 673 aa13.11□□□□□ -0.31
CCND1-204ENST00000539241 ANKRD53Q8N9V6 530 aa13.11□□□□□ -0.31
CCND1-204ENST00000539241 FAM98AQ8NCA5 519 aaKnown RBP13.11□□□□□ -0.31
CCND1-204ENST00000539241 ELP5Q8TE02 316 aa13.11□□□□□ -0.31
CCND1-204ENST00000539241 UTP15Q8TED0 518 aaKnown RBP13.11□□□□□ -0.31
CCND1-204ENST00000539241 FRMD6Q96NE9 622 aa13.11□□□□□ -0.31
CCND1-204ENST00000539241 PTCHD1Q96NR3 888 aa13.11□□□□□ -0.31
CCND1-204ENST00000539241 ATOH8Q96SQ7 321 aa13.11□□□□□ -0.31
CCND1-204ENST00000539241 PELI2Q9HAT8 420 aa13.11□□□□□ -0.31
CCND1-204ENST00000539241 NUDT4Q9NZJ9 180 aa13.11□□□□□ -0.31
CCND1-204ENST00000539241 LRFN1Q9P244 771 aa13.11□□□□□ -0.31
CCND1-204ENST00000539241 RNF112Q9ULX5 631 aa13.11□□□□□ -0.31
CCND1-204ENST00000539241 APCP25054 2843 aa13.1□□□□□ -0.31
CCND1-204ENST00000539241 URADA6NGE7 173 aa13.1□□□□□ -0.31
CCND1-204ENST00000539241 SAGE2PA6NJ88 616 aa13.1□□□□□ -0.31
CCND1-204ENST00000539241 SYCE1LA8MT33 242 aa13.1□□□□□ -0.31
CCND1-204ENST00000539241 FOXO6A8MYZ6 492 aa13.1□□□□□ -0.31
CCND1-204ENST00000539241 NPIPA5E9PKD4 350 aa13.1□□□□□ -0.31
CCND1-204ENST00000539241 CDK2AP1O14519 115 aa13.1□□□□□ -0.31
CCND1-204ENST00000539241 PRMT3O60678 531 aa13.1□□□□□ -0.31
CCND1-204ENST00000539241 GLRA3O75311 464 aa13.1□□□□□ -0.31
CCND1-204ENST00000539241 SP1P08047 785 aa13.1□□□□□ -0.31
CCND1-204ENST00000539241 ESRRAP11474 423 aaPredicted RBP13.1□□□□□ -0.31
CCND1-204ENST00000539241 KRT4P19013 534 aa13.1□□□□□ -0.31
CCND1-204ENST00000539241 HNF4AP41235 474 aa13.1□□□□□ -0.31
CCND1-204ENST00000539241 HNMTP50135 292 aa13.1□□□□□ -0.31
CCND1-204ENST00000539241 RAB8AP61006 207 aa13.1□□□□□ -0.31
CCND1-204ENST00000539241 ADORA2A-AS1P86434 159 aa13.1□□□□□ -0.31
CCND1-204ENST00000539241 SLC18A2Q05940 514 aa13.1□□□□□ -0.31
CCND1-204ENST00000539241 ZNF630Q2M218 657 aaPredicted RBP13.1□□□□□ -0.31
CCND1-204ENST00000539241 ZNF468Q5VIY5 522 aaPredicted RBP13.1□□□□□ -0.31
CCND1-204ENST00000539241 XKRXQ6PP77 449 aa13.1□□□□□ -0.31
CCND1-204ENST00000539241 NXPE4Q6UWF7 544 aa13.1□□□□□ -0.31
CCND1-204ENST00000539241 Q6ZPB1 254 aaPredicted RBP13.1□□□□□ -0.31
CCND1-204ENST00000539241 HDXQ7Z353 690 aa13.1□□□□□ -0.31
CCND1-204ENST00000539241 TMPRSS11BQ86T26 416 aa13.1□□□□□ -0.31
CCND1-204ENST00000539241 THOC6Q86W42 341 aaKnown RBP13.1□□□□□ -0.31
CCND1-204ENST00000539241 SPPL2CQ8IUH8 684 aa13.1□□□□□ -0.31
CCND1-204ENST00000539241 TCAIMQ8N3R3 496 aa13.1□□□□□ -0.31
CCND1-204ENST00000539241 PDPRQ8NCN5 879 aa13.1□□□□□ -0.31
CCND1-204ENST00000539241 TRPV3Q8NET8 790 aa13.1□□□□□ -0.31
CCND1-204ENST00000539241 PGM2Q96G03 612 aa13.1□□□□□ -0.31
CCND1-204ENST00000539241 EGFL8Q99944 293 aa13.1□□□□□ -0.31
CCND1-204ENST00000539241 MRPL57Q9BQC6 102 aaKnown RBP13.1□□□□□ -0.31
CCND1-204ENST00000539241 AIF1LQ9BQI0 150 aa13.1□□□□□ -0.31
CCND1-204ENST00000539241 SLC6A16Q9GZN6 736 aa13.1□□□□□ -0.31
CCND1-204ENST00000539241 CLK4Q9HAZ1 481 aaKnown RBP13.1□□□□□ -0.31
CCND1-204ENST00000539241 CHST11Q9NPF2 352 aa13.1□□□□□ -0.31
CCND1-204ENST00000539241 ZNF358Q9NW07 568 aa13.1□□□□□ -0.31
CCND1-204ENST00000539241 SENP1Q9P0U3 644 aa13.1□□□□□ -0.31
CCND1-204ENST00000539241 XPR1Q9UBH6 696 aa13.1□□□□□ -0.31
CCND1-204ENST00000539241 DCDC2Q9UHG0 476 aa13.1□□□□□ -0.31
CCND1-204ENST00000539241 NPIPA1Q9UND3 350 aa13.1□□□□□ -0.31
CCND1-204ENST00000539241 ZNF835Q9Y2P0 537 aa13.1□□□□□ -0.31
CCND1-204ENST00000539241 SCN2AQ99250 2005 aa13.1□□□□□ -0.31
CCND1-204ENST00000539241 SCN3AQ9NY46 2000 aa13.1□□□□□ -0.31
CCND1-204ENST00000539241 FBN2P35556 2912 aa13.09□□□□□ -0.31
CCND1-204ENST00000539241 SUPT3HB4E1H0 165 aa13.09□□□□□ -0.31
CCND1-204ENST00000539241 PSMD12O00232 456 aaPredicted RBP13.09□□□□□ -0.31
CCND1-204ENST00000539241 SUPT3HO75486 399 aa13.09□□□□□ -0.31
CCND1-204ENST00000539241 SLC25A12O75746 678 aa13.09□□□□□ -0.31
CCND1-204ENST00000539241 S100BP04271 92 aaPredicted RBP13.09□□□□□ -0.31
CCND1-204ENST00000539241 MYZAPP0CAP1 466 aa13.09□□□□□ -0.31
CCND1-204ENST00000539241 SMIM10L1P0DMW3 83 aa13.09□□□□□ -0.31
CCND1-204ENST00000539241 RNH1P13489 461 aaKnown RBP13.09□□□□□ -0.31
CCND1-204ENST00000539241 TPP2P29144 1249 aaPredicted RBP13.09□□□□□ -0.31
CCND1-204ENST00000539241 CRHR1P34998 444 aa13.09□□□□□ -0.31
CCND1-204ENST00000539241 PTGER4P35408 488 aa13.09□□□□□ -0.31
CCND1-204ENST00000539241 KCNC1P48547 511 aa13.09□□□□□ -0.31
CCND1-204ENST00000539241 SMSP52788 366 aa13.09□□□□□ -0.31
CCND1-204ENST00000539241 BTG2P78543 158 aa13.09□□□□□ -0.31
CCND1-204ENST00000539241 HYAL2Q12891 473 aa13.09□□□□□ -0.31
CCND1-204ENST00000539241 RBBP5Q15291 538 aaKnown RBP13.09□□□□□ -0.31
CCND1-204ENST00000539241 MAPKAPK3Q16644 382 aa13.09□□□□□ -0.31
CCND1-204ENST00000539241 SULT1C3Q6IMI6 304 aa13.09□□□□□ -0.31
CCND1-204ENST00000539241 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.09□□□□□ -0.31
CCND1-204ENST00000539241 SIAH3Q8IW03 269 aa13.09□□□□□ -0.31
CCND1-204ENST00000539241 EXT2Q93063 718 aa13.09□□□□□ -0.31
CCND1-204ENST00000539241 RHBDF1Q96CC6 855 aa13.09□□□□□ -0.31
CCND1-204ENST00000539241 SMIM10Q96HG1 83 aa13.09□□□□□ -0.31
CCND1-204ENST00000539241 SCYL1Q96KG9 808 aa13.09□□□□□ -0.31
CCND1-204ENST00000539241 MRPL46Q9H2W6 279 aaKnown RBP13.09□□□□□ -0.31
CCND1-204ENST00000539241 RHBGQ9H310 441 aa13.09□□□□□ -0.31
CCND1-204ENST00000539241 CENPHQ9H3R5 247 aa13.09□□□□□ -0.31
CCND1-204ENST00000539241 KLHL31Q9H511 634 aa13.09□□□□□ -0.31
CCND1-204ENST00000539241 VIPAS39Q9H9C1 493 aa13.09□□□□□ -0.31
CCND1-204ENST00000539241 PRDM9Q9NQV7 894 aa13.09□□□□□ -0.31
CCND1-204ENST00000539241 MKS1Q9NXB0 559 aa13.09□□□□□ -0.31
CCND1-204ENST00000539241 CD274Q9NZQ7 290 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms