RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 HERPUD1Q15011 391 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 PTGES3Q15185 160 aaKnown RBP0.34□□□□□ -2.36
COPB1-212ENST00000534771 PRR4Q16378 134 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 MICAQ29983 383 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 C15orf59Q2T9L4 293 aaPredicted RBP0.34□□□□□ -2.36
COPB1-212ENST00000534771 KRTAP13-4Q3LI77 160 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 LRRC37A5PQ49AS3 106 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 NHSL2Q5HYW2 709 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 PAGE2BQ5JRK9 111 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 C6orf136Q5SQH8 315 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 Q5W150 140 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 SLC22A10Q63ZE4 541 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 HAUS3Q68CZ6 603 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 TCEAL6Q6IPX3 200 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 NAA16Q6N069 864 aaPredicted RBP0.34□□□□□ -2.36
COPB1-212ENST00000534771 TTC27Q6P3X3 843 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 FUT10Q6P4F1 479 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 C15orf52Q6ZUT6 534 aaKnown RBP0.34□□□□□ -2.36
COPB1-212ENST00000534771 RFPL4BQ6ZWI9 263 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 COX8CQ7Z4L0 72 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 SYVN1Q86TM6 617 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 PRUNE1Q86TP1 453 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 KBTBD6Q86V97 674 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 SAXO1Q8IYX7 474 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 TTC30BQ8N4P2 665 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 TTC39CQ8N584 583 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 ARIH2OSQ8N7S6 290 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 CLEC1AQ8NC01 280 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 FBXO30Q8TB52 745 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 LIPHQ8WWY8 451 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 MARC2Q969Z3 335 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 RBM41Q96IZ5 413 aaKnown RBP0.34□□□□□ -2.36
COPB1-212ENST00000534771 C7orf26Q96N11 449 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 SEC62Q99442 399 aaKnown RBP0.34□□□□□ -2.36
COPB1-212ENST00000534771 JPH2Q9BR39 696 aaPredicted RBP0.34□□□□□ -2.36
COPB1-212ENST00000534771 ITPAQ9BY32 194 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 ZNF702PQ9H963 129 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 ELL3Q9HB65 397 aaPredicted RBP0.34□□□□□ -2.36
COPB1-212ENST00000534771 DNAJC4Q9NNZ3 241 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 UBE2TQ9NPD8 197 aaPredicted RBP0.34□□□□□ -2.36
COPB1-212ENST00000534771 EIF2B3Q9NR50 452 aaKnown RBP0.34□□□□□ -2.36
COPB1-212ENST00000534771 CLIC5Q9NZA1 410 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 TBC1D7Q9P0N9 293 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 SUCLA2Q9P2R7 463 aaPredicted RBP0.34□□□□□ -2.36
COPB1-212ENST00000534771 ORC3Q9UBD5 711 aaPredicted RBP0.34□□□□□ -2.36
COPB1-212ENST00000534771 APOBEC3BQ9UH17 382 aaKnown RBP0.34□□□□□ -2.36
COPB1-212ENST00000534771 DDX25Q9UHL0 483 aaKnown RBP0.34□□□□□ -2.36
COPB1-212ENST00000534771 PHF11Q9UIL8 331 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 ZNF223Q9UK11 482 aaPredicted RBP0.34□□□□□ -2.36
COPB1-212ENST00000534771 KIF26AQ9ULI4 1882 aaPredicted RBP0.34□□□□□ -2.36
COPB1-212ENST00000534771 TMEM98Q9Y2Y6 226 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 MAGED1Q9Y5V3 778 aaPredicted RBP0.34□□□□□ -2.36
COPB1-212ENST00000534771 CACNG2Q9Y698 323 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 TENM1Q9UKZ4 2725 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 TRAV18A0A075B6X5 111 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 A0A0U1RQS6 177 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 SLC15A5A6NIM6 579 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 TMCO5BA8MYB1 307 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 H3BMM5 538 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 DLGAP1O14490 977 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 PTGESO14684 152 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 NUDT21O43809 227 aaKnown RBP0.33□□□□□ -2.36
COPB1-212ENST00000534771 B4GALT2O60909 372 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 GPX5O75715 221 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 RECQL5O94762 991 aaPredicted RBP0.33□□□□□ -2.36
COPB1-212ENST00000534771 HPNP05981 417 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 LAMP1P11279 417 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 MYL6BP14649 208 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 CD22P20273 847 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 TM4SF1P30408 202 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 MAPK4P31152 587 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 CDH5P33151 784 aaPredicted RBP0.33□□□□□ -2.36
COPB1-212ENST00000534771 HSD17B3P37058 310 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 HADHAP40939 763 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 ZNF136P52737 540 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 SUCLG1P53597 346 aaKnown RBP0.33□□□□□ -2.36
COPB1-212ENST00000534771 HERVK_113P61574 105 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 PAX5Q02548 391 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 CSTF1Q05048 431 aaKnown RBP0.33□□□□□ -2.36
COPB1-212ENST00000534771 SULT2A1Q06520 285 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 EGFEM1PQ0D2K5 195 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 FUT7Q11130 342 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 CNTN1Q12860 1018 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 PRPF4BQ13523 1007 aaKnown RBP0.33□□□□□ -2.36
COPB1-212ENST00000534771 MOBPQ13875 183 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 BECN1Q14457 450 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 GPNMBQ14956 572 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 QRICH1Q2TAL8 776 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 C14orf28Q4W4Y0 310 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 RFTN2Q52LD8 501 aaPredicted RBP0.33□□□□□ -2.36
COPB1-212ENST00000534771 TOR1AIP1Q5JTV8 583 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 SPATA46Q5T0L3 261 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 DDX59Q5T1V6 619 aaKnown RBP eCLIP0.33□□□□□ -2.36
COPB1-212ENST00000534771 CYB5R2Q6BCY4 276 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 ZNF770Q6IQ21 691 aaPredicted RBP0.33□□□□□ -2.36
COPB1-212ENST00000534771 PIGWQ7Z7B1 504 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 AMIGO1Q86WK6 493 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 MMAAQ8IVH4 418 aaKnown RBP0.33□□□□□ -2.36
COPB1-212ENST00000534771 CERS5Q8N5B7 392 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 TSPAN14Q8NG11 270 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms