RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 HOXB2P14652 356 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 ITIH1P19827 911 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 MPGP29372 298 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 HOXD3P31249 432 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 SLC6A6P31641 620 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 WNT5AP41221 380 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 TNFSF9P41273 254 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 FRKP42685 505 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 AMTP48728 403 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 LHX1P48742 406 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 EEF1A1P68104 462 aaKnown RBP4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 WASHC5Q12768 1159 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 NPRL3Q12980 569 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 CUL3Q13618 768 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 FHL2Q14192 279 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 PXDC1Q5TGL8 231 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 EEF1A1P5Q5VTE0 462 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 TRNP1Q6NT89 227 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 Q6ZSV7 163 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 Q6ZTK2 550 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 RD3Q7Z3Z2 195 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 ANKRD20A12PQ8NF67 263 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 B4GALNT2Q8NHY0 566 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 OCC1Q8TAD7 63 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 ZNF461Q8TAF7 563 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 CCDC107Q8WV48 283 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 HEXDCQ8WVB3 486 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 HTR3CQ8WXA8 447 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 DNASE2BQ8WZ79 361 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 INPP5DQ92835 1189 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 TBC1D31Q96DN5 1066 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 OR1F2PQ96R84 312 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 MTERF1Q99551 399 aaKnown RBP4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 MEIS3Q99687 375 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 OLFM1Q99784 485 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 BTBD10Q9BSF8 475 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 KRTAP4-11Q9BYQ6 195 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 SLC29A3Q9BZD2 475 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 THAP9Q9H5L6 903 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 CD93Q9NPY3 652 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 DUS2Q9NX74 493 aaKnown RBP4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 IL19Q9UHD0 177 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 AGO1Q9UL18 857 aaKnown RBP4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 CHKBQ9Y259 395 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 PADI2Q9Y2J8 665 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 PRRC2AP48634 2157 aaKnown RBP4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 OR2M5A3KFT3 312 aa4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 NEMP2A6NFY4 417 aa4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 CCDC69A6NI79 296 aa4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 OR6C75A6NL08 312 aa4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 CYR61O00622 381 aa4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 DFNA5O60443 496 aa4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 GPR137BO60478 399 aa4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 SEC22BO75396 215 aa4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 SURF6O75683 361 aaKnown RBP4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 OLFM2O95897 454 aa4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 APODP05090 189 aa4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 UROSP10746 265 aa4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 COX6B1P14854 86 aa4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 ZNF23P17027 643 aa4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 KLK2P20151 261 aa4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 KELP23276 732 aa4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 GABRR2P28476 465 aa4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 KIF5BP33176 963 aa4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 PTGER4P35408 488 aa4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 MMP13P45452 471 aa4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 LEPRP48357 1165 aaKnown RBP4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 RFX2P48378 723 aa4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 MXI1P50539 228 aa4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 CLDN20P56880 219 aa4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 KDSRQ06136 332 aa4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 LASP1Q14847 261 aaKnown RBP4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 TMEM35AQ53FP2 167 aa4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 FNBP1LQ5T0N5 605 aa4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 MORN5Q5VZ52 161 aa4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 TXNRD3NBQ6F5E7 133 aa4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 RAB12Q6IQ22 244 aa4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 TMPRSS11FQ6ZWK6 438 aa4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 GLCCI1Q86VQ1 547 aa4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 CHERPQ8IWX8 916 aaKnown RBP4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 ZNF619Q8N2I2 560 aa4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 RTL3Q8N8U3 475 aaKnown RBP4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 OR2AJ1Q8NGZ0 328 aa4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 SLC26A7Q8TE54 656 aa4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 SMPDL3BQ92485 455 aa4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 CENPTQ96BT3 561 aa4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 OTUB1Q96FW1 271 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 ATXN7L3BQ96GX2 97 aa4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 ZNF582Q96NG8 517 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 GAL3ST4Q96RP7 486 aa4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 NACAP1Q9BZK3 213 aa4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 TRIM6Q9C030 488 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 PCED1AQ9H1Q7 454 aa4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 DPAGT1Q9H3H5 408 aa4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 AKIRIN1Q9H9L7 192 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 CDH20Q9HBT6 801 aa4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 ZNF302Q9NR11 478 aa4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 KLHL1Q9NR64 748 aa4.41□□□□□ -1.7
HMGB1P23-201ENST00000518743 MIOSQ9NXC5 875 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms