RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 PRR23AA6NEV1 266 aa4.68□□□□□ -1.66
SSR3-208ENST00000496050 NPIPB9F8W1W9 429 aa4.68□□□□□ -1.66
SSR3-208ENST00000496050 MTRF1O75570 445 aaKnown RBP4.68□□□□□ -1.66
SSR3-208ENST00000496050 STBD1O95210 358 aa4.68□□□□□ -1.66
SSR3-208ENST00000496050 CXCL14O95715 111 aa4.68□□□□□ -1.66
SSR3-208ENST00000496050 SLC4A1P02730 911 aa4.68□□□□□ -1.66
SSR3-208ENST00000496050 EZRP15311 586 aaKnown RBP4.68□□□□□ -1.66
SSR3-208ENST00000496050 PRKACGP22612 351 aa4.68□□□□□ -1.66
SSR3-208ENST00000496050 GPR183P32249 361 aa4.68□□□□□ -1.66
SSR3-208ENST00000496050 OR1D2P34982 312 aa4.68□□□□□ -1.66
SSR3-208ENST00000496050 TNFSF10P50591 281 aa4.68□□□□□ -1.66
SSR3-208ENST00000496050 ERVK-16P61578 105 aa4.68□□□□□ -1.66
SSR3-208ENST00000496050 DHODHQ02127 395 aa4.68□□□□□ -1.66
SSR3-208ENST00000496050 GAMTQ14353 236 aa4.68□□□□□ -1.66
SSR3-208ENST00000496050 MTF1Q14872 753 aa4.68□□□□□ -1.66
SSR3-208ENST00000496050 CCDC40Q4G0X9 1142 aa4.68□□□□□ -1.66
SSR3-208ENST00000496050 KLHL22Q53GT1 634 aa4.68□□□□□ -1.66
SSR3-208ENST00000496050 NEK5Q6P3R8 708 aa4.68□□□□□ -1.66
SSR3-208ENST00000496050 MFSD7Q6UXD7 560 aa4.68□□□□□ -1.66
SSR3-208ENST00000496050 DLEU7Q6UYE1 221 aa4.68□□□□□ -1.66
SSR3-208ENST00000496050 Q71RC1 249 aaPredicted RBP4.68□□□□□ -1.66
SSR3-208ENST00000496050 TMEM185AQ8NFB2 350 aa4.68□□□□□ -1.66
SSR3-208ENST00000496050 NUP37Q8NFH4 326 aa4.68□□□□□ -1.66
SSR3-208ENST00000496050 TMEM186Q96B77 213 aa4.68□□□□□ -1.66
SSR3-208ENST00000496050 FAM218AQ96MZ4 157 aa4.68□□□□□ -1.66
SSR3-208ENST00000496050 ERGIC2Q96RQ1 377 aa4.68□□□□□ -1.66
SSR3-208ENST00000496050 USP28Q96RU2 1077 aa4.68□□□□□ -1.66
SSR3-208ENST00000496050 NUSAP1Q9BXS6 441 aaKnown RBP4.68□□□□□ -1.66
SSR3-208ENST00000496050 ZNF696Q9H7X3 374 aa4.68□□□□□ -1.66
SSR3-208ENST00000496050 DCLRE1BQ9H816 532 aa4.68□□□□□ -1.66
SSR3-208ENST00000496050 MED20Q9H944 212 aa4.68□□□□□ -1.66
SSR3-208ENST00000496050 UBE2TQ9NPD8 197 aaPredicted RBP4.68□□□□□ -1.66
SSR3-208ENST00000496050 HOMER3Q9NSC5 361 aa4.68□□□□□ -1.66
SSR3-208ENST00000496050 DDX28Q9NUL7 540 aaKnown RBP4.68□□□□□ -1.66
SSR3-208ENST00000496050 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.68□□□□□ -1.66
SSR3-208ENST00000496050 DNPEPQ9ULA0 475 aa4.68□□□□□ -1.66
SSR3-208ENST00000496050 ARHGAP42A6NI28 874 aa4.67□□□□□ -1.66
SSR3-208ENST00000496050 EEF2KO00418 725 aaKnown RBP4.67□□□□□ -1.66
SSR3-208ENST00000496050 SIGLEC5O15389 551 aa4.67□□□□□ -1.66
SSR3-208ENST00000496050 PRPSAP2O60256 369 aa4.67□□□□□ -1.66
SSR3-208ENST00000496050 NME2P1O60361 137 aa4.67□□□□□ -1.66
SSR3-208ENST00000496050 LRCH4O75427 683 aa4.67□□□□□ -1.66
SSR3-208ENST00000496050 RPLP0P05388 317 aaKnown RBP4.67□□□□□ -1.66
SSR3-208ENST00000496050 LYNP07948 512 aa4.67□□□□□ -1.66
SSR3-208ENST00000496050 SERPINF2P08697 491 aa4.67□□□□□ -1.66
SSR3-208ENST00000496050 CT45A8P0DMV1 189 aa4.67□□□□□ -1.66
SSR3-208ENST00000496050 CT45A9P0DMV2 189 aa4.67□□□□□ -1.66
SSR3-208ENST00000496050 PCP11498 1178 aaKnown RBP4.67□□□□□ -1.66
SSR3-208ENST00000496050 MARCKSP29966 332 aaPredicted RBP4.67□□□□□ -1.66
SSR3-208ENST00000496050 MMP12P39900 470 aa4.67□□□□□ -1.66
SSR3-208ENST00000496050 OPRL1P41146 370 aa4.67□□□□□ -1.66
SSR3-208ENST00000496050 ALDH3B1P43353 468 aa4.67□□□□□ -1.66
SSR3-208ENST00000496050 SLC6A12P48065 614 aa4.67□□□□□ -1.66
SSR3-208ENST00000496050 SRP54P61011 504 aaKnown RBP4.67□□□□□ -1.66
SSR3-208ENST00000496050 SSTP61278 116 aa4.67□□□□□ -1.66
SSR3-208ENST00000496050 DRP2Q13474 957 aa4.67□□□□□ -1.66
SSR3-208ENST00000496050 CT45A2Q5DJT8 189 aa4.67□□□□□ -1.66
SSR3-208ENST00000496050 CES4AQ5XG92 561 aa4.67□□□□□ -1.66
SSR3-208ENST00000496050 CAPN13Q6MZZ7 669 aaPredicted RBP4.67□□□□□ -1.66
SSR3-208ENST00000496050 ADAMTSL2Q86TH1 951 aa4.67□□□□□ -1.66
SSR3-208ENST00000496050 C17orf64Q86WR6 236 aa4.67□□□□□ -1.66
SSR3-208ENST00000496050 DND1Q8IYX4 353 aaKnown RBP4.67□□□□□ -1.66
SSR3-208ENST00000496050 MRPL43Q8N983 215 aaKnown RBP4.67□□□□□ -1.66
SSR3-208ENST00000496050 CCDC197Q8NCU1 140 aa4.67□□□□□ -1.66
SSR3-208ENST00000496050 OR5M9Q8NGP3 310 aa4.67□□□□□ -1.66
SSR3-208ENST00000496050 RPLP0P6Q8NHW5 317 aa4.67□□□□□ -1.66
SSR3-208ENST00000496050 C8orf46Q8TAG6 207 aa4.67□□□□□ -1.66
SSR3-208ENST00000496050 GPR148Q8TDV2 347 aa4.67□□□□□ -1.66
SSR3-208ENST00000496050 SLCO2A1Q92959 643 aa4.67□□□□□ -1.66
SSR3-208ENST00000496050 GLYATL1Q969I3 302 aa4.67□□□□□ -1.66
SSR3-208ENST00000496050 NSMCE2Q96MF7 247 aa4.67□□□□□ -1.66
SSR3-208ENST00000496050 ZNF300Q96RE9 604 aaPredicted RBP4.67□□□□□ -1.66
SSR3-208ENST00000496050 RBM4Q9BWF3 364 aaKnown RBP4.67□□□□□ -1.66
SSR3-208ENST00000496050 CARD9Q9H257 536 aa4.67□□□□□ -1.66
SSR3-208ENST00000496050 FNDC4Q9H6D8 234 aaPredicted RBP4.67□□□□□ -1.66
SSR3-208ENST00000496050 VPS54Q9P1Q0 977 aa4.67□□□□□ -1.66
SSR3-208ENST00000496050 KLK11Q9UBX7 282 aa4.67□□□□□ -1.66
SSR3-208ENST00000496050 OR1A2Q9Y585 309 aa4.67□□□□□ -1.66
SSR3-208ENST00000496050 CFAP73A6NFT4 308 aa4.66□□□□□ -1.66
SSR3-208ENST00000496050 CCDC69A6NI79 296 aa4.66□□□□□ -1.66
SSR3-208ENST00000496050 INPP4BO15327 924 aa4.66□□□□□ -1.66
SSR3-208ENST00000496050 IGKV3-20P01619 116 aa4.66□□□□□ -1.66
SSR3-208ENST00000496050 PTMAP06454 111 aaKnown RBP4.66□□□□□ -1.66
SSR3-208ENST00000496050 PGK2P07205 417 aa4.66□□□□□ -1.66
SSR3-208ENST00000496050 CFC1BP0CG36 223 aa4.66□□□□□ -1.66
SSR3-208ENST00000496050 CFC1P0CG37 223 aa4.66□□□□□ -1.66
SSR3-208ENST00000496050 FCARP24071 287 aa4.66□□□□□ -1.66
SSR3-208ENST00000496050 BACE1P56817 501 aa4.66□□□□□ -1.66
SSR3-208ENST00000496050 BPIFB3P59826 476 aa4.66□□□□□ -1.66
SSR3-208ENST00000496050 HERV-K104P63124 156 aa4.66□□□□□ -1.66
SSR3-208ENST00000496050 MFGE8Q08431 387 aaPredicted RBP4.66□□□□□ -1.66
SSR3-208ENST00000496050 TMEM187Q14656 261 aa4.66□□□□□ -1.66
SSR3-208ENST00000496050 MEF2DQ14814 521 aa4.66□□□□□ -1.66
SSR3-208ENST00000496050 HEPACAMQ14CZ8 416 aa4.66□□□□□ -1.66
SSR3-208ENST00000496050 TRADDQ15628 312 aa4.66□□□□□ -1.66
SSR3-208ENST00000496050 CARTPTQ16568 116 aa4.66□□□□□ -1.66
SSR3-208ENST00000496050 ZFP69Q49AA0 526 aa4.66□□□□□ -1.66
SSR3-208ENST00000496050 TTC31Q49AM3 519 aaPredicted RBP4.66□□□□□ -1.66
SSR3-208ENST00000496050 MPPE1Q53F39 396 aa4.66□□□□□ -1.66
SSR3-208ENST00000496050 PRAMEF7Q5VXH5 474 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms