RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 ZBTB49Q6ZSB9 765 aa1.42□□□□□ -2.18
CCDC93-209ENST00000488908 C15orf52Q6ZUT6 534 aaKnown RBP1.42□□□□□ -2.18
CCDC93-209ENST00000488908 COX8CQ7Z4L0 72 aa1.42□□□□□ -2.18
CCDC93-209ENST00000488908 CCDC71Q8IV32 467 aaPredicted RBP1.42□□□□□ -2.18
CCDC93-209ENST00000488908 TAGAPQ8N103 731 aa1.42□□□□□ -2.18
CCDC93-209ENST00000488908 LINC01555Q8NAE3 123 aa1.42□□□□□ -2.18
CCDC93-209ENST00000488908 PHF10Q8WUB8 498 aaKnown RBP1.42□□□□□ -2.18
CCDC93-209ENST00000488908 PRPF31Q8WWY3 499 aaKnown RBP1.42□□□□□ -2.18
CCDC93-209ENST00000488908 NTNG2Q96CW9 530 aa1.42□□□□□ -2.18
CCDC93-209ENST00000488908 TMCO6Q96DC7 493 aa1.42□□□□□ -2.18
CCDC93-209ENST00000488908 VSIG2Q96IQ7 327 aa1.42□□□□□ -2.18
CCDC93-209ENST00000488908 CASD1Q96PB1 797 aa1.42□□□□□ -2.18
CCDC93-209ENST00000488908 OLAHQ9NV23 265 aa1.42□□□□□ -2.18
CCDC93-209ENST00000488908 CLIC5Q9NZA1 410 aa1.42□□□□□ -2.18
CCDC93-209ENST00000488908 PPIEQ9UNP9 301 aaKnown RBP1.42□□□□□ -2.18
CCDC93-209ENST00000488908 AGTPBP1Q9UPW5 1226 aa1.42□□□□□ -2.18
CCDC93-209ENST00000488908 RNF24Q9Y225 148 aa1.42□□□□□ -2.18
CCDC93-209ENST00000488908 FBN1P35555 2871 aaKnown RBP1.42□□□□□ -2.18
CCDC93-209ENST00000488908 GLOD5A6NK44 160 aa1.41□□□□□ -2.18
CCDC93-209ENST00000488908 EEF2KO00418 725 aaKnown RBP1.41□□□□□ -2.18
CCDC93-209ENST00000488908 CD5P06127 495 aa1.41□□□□□ -2.18
CCDC93-209ENST00000488908 OR9G9P0C7N8 305 aa1.41□□□□□ -2.18
CCDC93-209ENST00000488908 CSH1P0DML2 217 aa1.41□□□□□ -2.18
CCDC93-209ENST00000488908 CSH2P0DML3 217 aa1.41□□□□□ -2.18
CCDC93-209ENST00000488908 ALOX12P18054 663 aa1.41□□□□□ -2.18
CCDC93-209ENST00000488908 PMELP40967 661 aa1.41□□□□□ -2.18
CCDC93-209ENST00000488908 RXRGP48443 463 aa1.41□□□□□ -2.18
CCDC93-209ENST00000488908 RIPPLY3P57055 190 aa1.41□□□□□ -2.18
CCDC93-209ENST00000488908 GSTO1P78417 241 aa1.41□□□□□ -2.18
CCDC93-209ENST00000488908 WTAPQ15007 396 aa1.41□□□□□ -2.18
CCDC93-209ENST00000488908 LACTB2Q53H82 288 aaPredicted RBP1.41□□□□□ -2.18
CCDC93-209ENST00000488908 PAN3Q58A45 887 aaKnown RBP1.41□□□□□ -2.18
CCDC93-209ENST00000488908 ABRAXAS1Q6UWZ7 409 aa1.41□□□□□ -2.18
CCDC93-209ENST00000488908 SCARA5Q6ZMJ2 495 aa1.41□□□□□ -2.18
CCDC93-209ENST00000488908 C1orf122Q6ZSJ8 110 aa1.41□□□□□ -2.18
CCDC93-209ENST00000488908 ANKRD33Q7Z3H0 272 aa1.41□□□□□ -2.18
CCDC93-209ENST00000488908 ZNF589Q86UQ0 364 aaPredicted RBP1.41□□□□□ -2.18
CCDC93-209ENST00000488908 AMIGO1Q86WK6 493 aa1.41□□□□□ -2.18
CCDC93-209ENST00000488908 KRTAP13-1Q8IUC0 172 aa1.41□□□□□ -2.18
CCDC93-209ENST00000488908 LINC00346Q8IVM7 164 aa1.41□□□□□ -2.18
CCDC93-209ENST00000488908 IL22RA2Q969J5 263 aa1.41□□□□□ -2.18
CCDC93-209ENST00000488908 RSRC1Q96IZ7 334 aaKnown RBP1.41□□□□□ -2.18
CCDC93-209ENST00000488908 CHCHD6Q9BRQ6 235 aa1.41□□□□□ -2.18
CCDC93-209ENST00000488908 PLA2G12AQ9BZM1 189 aa1.41□□□□□ -2.18
CCDC93-209ENST00000488908 CNOT10Q9H9A5 744 aaKnown RBP1.41□□□□□ -2.18
CCDC93-209ENST00000488908 WFDC1Q9HC57 220 aa1.41□□□□□ -2.18
CCDC93-209ENST00000488908 ZNF331Q9NQX6 463 aaPredicted RBP1.41□□□□□ -2.18
CCDC93-209ENST00000488908 IARS2Q9NSE4 1012 aaKnown RBP1.41□□□□□ -2.18
CCDC93-209ENST00000488908 HAUS2Q9NVX0 235 aa1.41□□□□□ -2.18
CCDC93-209ENST00000488908 MRPL15Q9P015 296 aaKnown RBP1.41□□□□□ -2.18
CCDC93-209ENST00000488908 VPS28Q9UK41 221 aa1.41□□□□□ -2.18
CCDC93-209ENST00000488908 TMEM5Q9Y2B1 443 aa1.41□□□□□ -2.18
CCDC93-209ENST00000488908 IGKV1D-17A0A075B6S4 117 aa1.4□□□□□ -2.19
CCDC93-209ENST00000488908 ANKRD18BA2A2Z9 1011 aa1.4□□□□□ -2.19
CCDC93-209ENST00000488908 TMCO5BA8MYB1 307 aa1.4□□□□□ -2.19
CCDC93-209ENST00000488908 ANHXE9PGG2 379 aa1.4□□□□□ -2.19
CCDC93-209ENST00000488908 DOK2O60496 412 aa1.4□□□□□ -2.19
CCDC93-209ENST00000488908 PENKP01210 267 aaPredicted RBP1.4□□□□□ -2.19
CCDC93-209ENST00000488908 HSPB1P04792 205 aaKnown RBP1.4□□□□□ -2.19
CCDC93-209ENST00000488908 P4HA1P13674 534 aa1.4□□□□□ -2.19
CCDC93-209ENST00000488908 EPORP19235 508 aa1.4□□□□□ -2.19
CCDC93-209ENST00000488908 CAPN3P20807 821 aa1.4□□□□□ -2.19
CCDC93-209ENST00000488908 HOXD13P35453 343 aa1.4□□□□□ -2.19
CCDC93-209ENST00000488908 SULT2A1Q06520 285 aa1.4□□□□□ -2.19
CCDC93-209ENST00000488908 CUL4AQ13619 759 aa1.4□□□□□ -2.19
CCDC93-209ENST00000488908 RILPL1Q5EBL4 403 aa1.4□□□□□ -2.19
CCDC93-209ENST00000488908 ZNF658Q5TYW1 1059 aaPredicted RBP1.4□□□□□ -2.19
CCDC93-209ENST00000488908 NEPROQ6NW34 567 aa1.4□□□□□ -2.19
CCDC93-209ENST00000488908 DNAAF5Q86Y56 855 aa1.4□□□□□ -2.19
CCDC93-209ENST00000488908 TGIF2LYQ8IUE0 185 aa1.4□□□□□ -2.19
CCDC93-209ENST00000488908 ZNF433Q8N7K0 673 aaPredicted RBP1.4□□□□□ -2.19
CCDC93-209ENST00000488908 CLEC1AQ8NC01 280 aa1.4□□□□□ -2.19
CCDC93-209ENST00000488908 OR13F1Q8NGS4 319 aa1.4□□□□□ -2.19
CCDC93-209ENST00000488908 SKA1Q96BD8 255 aa1.4□□□□□ -2.19
CCDC93-209ENST00000488908 GDAP1L1Q96MZ0 367 aa1.4□□□□□ -2.19
CCDC93-209ENST00000488908 OR5M11Q96RB7 305 aa1.4□□□□□ -2.19
CCDC93-209ENST00000488908 RPF1Q9H9Y2 349 aaKnown RBP1.4□□□□□ -2.19
CCDC93-209ENST00000488908 XAB2Q9HCS7 855 aaKnown RBP1.4□□□□□ -2.19
CCDC93-209ENST00000488908 UBE2TQ9NPD8 197 aaPredicted RBP1.4□□□□□ -2.19
CCDC93-209ENST00000488908 ABCC13Q9NSE7 274 aa1.4□□□□□ -2.19
CCDC93-209ENST00000488908 OTOGLQ3ZCN5 2332 aa1.4□□□□□ -2.19
CCDC93-209ENST00000488908 ASTN1O14525 1302 aa1.4□□□□□ -2.19
CCDC93-209ENST00000488908 COL1A2P08123 1366 aa1.39□□□□□ -2.19
CCDC93-209ENST00000488908 LRCOL1A6NCL2 159 aa1.39□□□□□ -2.19
CCDC93-209ENST00000488908 ZNF724A8MTY0 619 aa1.39□□□□□ -2.19
CCDC93-209ENST00000488908 SERPINE3A8MV23 424 aa1.39□□□□□ -2.19
CCDC93-209ENST00000488908 B4DXG7 233 aa1.39□□□□□ -2.19
CCDC93-209ENST00000488908 E5RGE8 158 aa1.39□□□□□ -2.19
CCDC93-209ENST00000488908 DUSP14O95147 198 aaKnown RBP1.39□□□□□ -2.19
CCDC93-209ENST00000488908 PRAMEF12O95522 483 aa1.39□□□□□ -2.19
CCDC93-209ENST00000488908 FGF19O95750 216 aa1.39□□□□□ -2.19
CCDC93-209ENST00000488908 PDGFBP01127 241 aaPredicted RBP1.39□□□□□ -2.19
CCDC93-209ENST00000488908 ABCB1P08183 1280 aaPredicted RBP1.39□□□□□ -2.19
CCDC93-209ENST00000488908 AZGP1P25311 298 aaKnown RBP1.39□□□□□ -2.19
CCDC93-209ENST00000488908 PPP2R1AP30153 589 aa1.39□□□□□ -2.19
CCDC93-209ENST00000488908 AXLP30530 894 aa1.39□□□□□ -2.19
CCDC93-209ENST00000488908 EIF2DP41214 584 aaKnown RBP1.39□□□□□ -2.19
CCDC93-209ENST00000488908 LIG4P49917 911 aa1.39□□□□□ -2.19
CCDC93-209ENST00000488908 EFNA3P52797 238 aa1.39□□□□□ -2.19
CCDC93-209ENST00000488908 BACE1P56817 501 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 1028.7 ms