RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 MYOCOSA0A1B0GUC4 107 aa12.07□□□□□ -0.48
HDAC1-209ENST00000484305 ANKUB1A6NFN9 424 aa12.07□□□□□ -0.48
HDAC1-209ENST00000484305 SAGE2PA6NJ88 616 aa12.07□□□□□ -0.48
HDAC1-209ENST00000484305 CLDN4O14493 209 aa12.07□□□□□ -0.48
HDAC1-209ENST00000484305 SEMA7AO75326 666 aa12.07□□□□□ -0.48
HDAC1-209ENST00000484305 SBK3P0C264 359 aa12.07□□□□□ -0.48
HDAC1-209ENST00000484305 MYBL2P10244 700 aa12.07□□□□□ -0.48
HDAC1-209ENST00000484305 EEF1DP29692 281 aaKnown RBP12.07□□□□□ -0.48
HDAC1-209ENST00000484305 PPP2R1BP30154 601 aa12.07□□□□□ -0.48
HDAC1-209ENST00000484305 SERPINB1P30740 379 aa12.07□□□□□ -0.48
HDAC1-209ENST00000484305 PIK3CBP42338 1070 aa12.07□□□□□ -0.48
HDAC1-209ENST00000484305 HSD17B7P56937 341 aa12.07□□□□□ -0.48
HDAC1-209ENST00000484305 SLC13A2Q13183 592 aa12.07□□□□□ -0.48
HDAC1-209ENST00000484305 SLC29A2Q14542 456 aa12.07□□□□□ -0.48
HDAC1-209ENST00000484305 CPSF6Q16630 551 aaKnown RBP eCLIP12.07□□□□□ -0.48
HDAC1-209ENST00000484305 MEP1AQ16819 746 aa12.07□□□□□ -0.48
HDAC1-209ENST00000484305 TMEM35AQ53FP2 167 aa12.07□□□□□ -0.48
HDAC1-209ENST00000484305 FHL5Q5TD97 284 aa12.07□□□□□ -0.48
HDAC1-209ENST00000484305 KHDRBS2Q5VWX1 349 aaKnown RBP12.07□□□□□ -0.48
HDAC1-209ENST00000484305 METTL2BQ6P1Q9 378 aaKnown RBP12.07□□□□□ -0.48
HDAC1-209ENST00000484305 CLNKQ7Z7G1 428 aa12.07□□□□□ -0.48
HDAC1-209ENST00000484305 ZNF595Q8IYB9 648 aa12.07□□□□□ -0.48
HDAC1-209ENST00000484305 TMEM151AQ8N4L1 468 aa12.07□□□□□ -0.48
HDAC1-209ENST00000484305 L3MBTL4Q8NA19 623 aa12.07□□□□□ -0.48
HDAC1-209ENST00000484305 SRFBP1Q8NEF9 429 aaKnown RBP12.07□□□□□ -0.48
HDAC1-209ENST00000484305 PRR7Q8TB68 274 aa12.07□□□□□ -0.48
HDAC1-209ENST00000484305 ADAMTS18Q8TE60 1221 aa12.07□□□□□ -0.48
HDAC1-209ENST00000484305 FAR1Q8WVX9 515 aa12.07□□□□□ -0.48
HDAC1-209ENST00000484305 CMTM7Q96FZ5 175 aa12.07□□□□□ -0.48
HDAC1-209ENST00000484305 TAAR6Q96RI8 345 aa12.07□□□□□ -0.48
HDAC1-209ENST00000484305 MRPL57Q9BQC6 102 aaKnown RBP12.07□□□□□ -0.48
HDAC1-209ENST00000484305 SORBS1Q9BX66 1292 aaKnown RBP12.07□□□□□ -0.48
HDAC1-209ENST00000484305 EPB41L4BQ9H329 900 aa12.07□□□□□ -0.48
HDAC1-209ENST00000484305 CDCP1Q9H5V8 836 aa12.07□□□□□ -0.48
HDAC1-209ENST00000484305 NOL11Q9H8H0 719 aaKnown RBP12.07□□□□□ -0.48
HDAC1-209ENST00000484305 PNO1Q9NRX1 252 aaKnown RBP12.07□□□□□ -0.48
HDAC1-209ENST00000484305 ANKRD10Q9NXR5 420 aa12.07□□□□□ -0.48
HDAC1-209ENST00000484305 ADGRE2Q9UHX3 823 aa12.07□□□□□ -0.48
HDAC1-209ENST00000484305 MRPS33Q9Y291 106 aaKnown RBP12.07□□□□□ -0.48
HDAC1-209ENST00000484305 TSC22D4Q9Y3Q8 395 aa12.07□□□□□ -0.48
HDAC1-209ENST00000484305 H0YIV9 168 aa12.06□□□□□ -0.48
HDAC1-209ENST00000484305 STX16-NPEPL1H3BU86 382 aa12.06□□□□□ -0.48
HDAC1-209ENST00000484305 OR7A17O14581 309 aa12.06□□□□□ -0.48
HDAC1-209ENST00000484305 STX16O14662 325 aa12.06□□□□□ -0.48
HDAC1-209ENST00000484305 UGDHO60701 494 aa12.06□□□□□ -0.48
HDAC1-209ENST00000484305 PRAMEF2O60811 474 aa12.06□□□□□ -0.48
HDAC1-209ENST00000484305 SMIM24O75264 130 aa12.06□□□□□ -0.48
HDAC1-209ENST00000484305 MYO1DO94832 1006 aa12.06□□□□□ -0.48
HDAC1-209ENST00000484305 AGFG2O95081 481 aa12.06□□□□□ -0.48
HDAC1-209ENST00000484305 SCELO95171 688 aa12.06□□□□□ -0.48
HDAC1-209ENST00000484305 HIST1H1TP22492 207 aaPredicted RBP12.06□□□□□ -0.48
HDAC1-209ENST00000484305 CD96P40200 585 aa12.06□□□□□ -0.48
HDAC1-209ENST00000484305 PIK3CGP48736 1102 aa12.06□□□□□ -0.48
HDAC1-209ENST00000484305 TAS2R50P59544 299 aa12.06□□□□□ -0.48
HDAC1-209ENST00000484305 RPS13P62277 151 aaKnown RBP12.06□□□□□ -0.48
HDAC1-209ENST00000484305 TUBA3CQ13748 450 aa12.06□□□□□ -0.48
HDAC1-209ENST00000484305 AP5B1Q2VPB7 878 aa12.06□□□□□ -0.48
HDAC1-209ENST00000484305 DEPDC1Q5TB30 811 aa12.06□□□□□ -0.48
HDAC1-209ENST00000484305 LGSNQ5TDP6 509 aa12.06□□□□□ -0.48
HDAC1-209ENST00000484305 OR4C11Q6IEV9 310 aa12.06□□□□□ -0.48
HDAC1-209ENST00000484305 TUBA3EQ6PEY2 450 aa12.06□□□□□ -0.48
HDAC1-209ENST00000484305 FAM180AQ6UWF9 173 aa12.06□□□□□ -0.48
HDAC1-209ENST00000484305 TIFABQ6ZNK6 161 aa12.06□□□□□ -0.48
HDAC1-209ENST00000484305 RPS27LQ71UM5 84 aaKnown RBP12.06□□□□□ -0.48
HDAC1-209ENST00000484305 RPS19BP1Q86WX3 136 aaKnown RBP12.06□□□□□ -0.48
HDAC1-209ENST00000484305 SLC5A8Q8N695 610 aa12.06□□□□□ -0.48
HDAC1-209ENST00000484305 APCDD1LQ8NCL9 501 aa12.06□□□□□ -0.48
HDAC1-209ENST00000484305 OR52B6Q8NGF0 335 aa12.06□□□□□ -0.48
HDAC1-209ENST00000484305 RGMAQ96B86 450 aa12.06□□□□□ -0.48
HDAC1-209ENST00000484305 NSUN5Q96P11 429 aaKnown RBP12.06□□□□□ -0.48
HDAC1-209ENST00000484305 SIGLEC12Q96PQ1 595 aa12.06□□□□□ -0.48
HDAC1-209ENST00000484305 CDK15Q96Q40 435 aa12.06□□□□□ -0.48
HDAC1-209ENST00000484305 ROGDIQ9GZN7 287 aa12.06□□□□□ -0.48
HDAC1-209ENST00000484305 MRPL46Q9H2W6 279 aaKnown RBP12.06□□□□□ -0.48
HDAC1-209ENST00000484305 L2HGDHQ9H9P8 463 aa12.06□□□□□ -0.48
HDAC1-209ENST00000484305 ZBTB26Q9HCK0 441 aa12.06□□□□□ -0.48
HDAC1-209ENST00000484305 LYRM4Q9HD34 91 aa12.06□□□□□ -0.48
HDAC1-209ENST00000484305 DMRT3Q9NQL9 472 aa12.06□□□□□ -0.48
HDAC1-209ENST00000484305 PCTPQ9UKL6 214 aa12.06□□□□□ -0.48
HDAC1-209ENST00000484305 TMCO1Q9UM00 188 aa12.06□□□□□ -0.48
HDAC1-209ENST00000484305 PCDHGA11Q9Y5H2 935 aa12.06□□□□□ -0.48
HDAC1-209ENST00000484305 POLEQ07864 2286 aa12.06□□□□□ -0.48
HDAC1-209ENST00000484305 GABRR3A8MPY1 467 aa12.05□□□□□ -0.48
HDAC1-209ENST00000484305 PLPP1O14494 284 aa12.05□□□□□ -0.48
HDAC1-209ENST00000484305 CTNSO60931 367 aa12.05□□□□□ -0.48
HDAC1-209ENST00000484305 LDB3O75112 727 aa12.05□□□□□ -0.48
HDAC1-209ENST00000484305 CLDN9O95484 217 aa12.05□□□□□ -0.48
HDAC1-209ENST00000484305 SSR2P43308 183 aa12.05□□□□□ -0.48
HDAC1-209ENST00000484305 NEK2P51955 445 aa12.05□□□□□ -0.48
HDAC1-209ENST00000484305 RAP1GDS1P52306 607 aa12.05□□□□□ -0.48
HDAC1-209ENST00000484305 SRSF11Q05519 484 aaKnown RBP12.05□□□□□ -0.48
HDAC1-209ENST00000484305 ELOAQ14241 798 aaKnown RBP12.05□□□□□ -0.48
HDAC1-209ENST00000484305 RCN2Q14257 317 aa12.05□□□□□ -0.48
HDAC1-209ENST00000484305 TERF2Q15554 542 aa12.05□□□□□ -0.48
HDAC1-209ENST00000484305 ZRSR2Q15696 482 aaKnown RBP12.05□□□□□ -0.48
HDAC1-209ENST00000484305 ZNF766Q5HY98 468 aa12.05□□□□□ -0.48
HDAC1-209ENST00000484305 ZNF468Q5VIY5 522 aaPredicted RBP12.05□□□□□ -0.48
HDAC1-209ENST00000484305 ZNF324BQ6AW86 544 aaPredicted RBP12.05□□□□□ -0.48
HDAC1-209ENST00000484305 SPINK14Q6IE38 97 aa12.05□□□□□ -0.48
HDAC1-209ENST00000484305 BCORP1Q8N888 145 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms