RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 Q6ZPB1 254 aaPredicted RBP8.11□□□□□ -1.11
PTPRK-206ENST00000368215 SPRED1Q7Z699 444 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 CENPSQ8N2Z9 138 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 GPR151Q8TDV0 419 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 HMGB4Q8WW32 186 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 AHCYL2Q96HN2 611 aaKnown RBP8.11□□□□□ -1.11
PTPRK-206ENST00000368215 CPPED1Q9BRF8 314 aaPredicted RBP8.11□□□□□ -1.11
PTPRK-206ENST00000368215 OR51V1Q9H2C8 321 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 IKZF5Q9H5V7 419 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 ZNF624Q9P2J8 865 aaPredicted RBP8.11□□□□□ -1.11
PTPRK-206ENST00000368215 SARDHQ9UL12 918 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 IRAK3Q9Y616 596 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 CYP17A1P05093 508 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 CA3P07451 260 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 HOXB2P14652 356 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 PSMB5P28074 263 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 SMU1Q2TAY7 513 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 CCDC92Q53HC0 331 aaPredicted RBP8.1□□□□□ -1.11
PTPRK-206ENST00000368215 CDKL4Q5MAI5 379 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 ZNF776Q68DI1 518 aaPredicted RBP8.1□□□□□ -1.11
PTPRK-206ENST00000368215 SPARTQ8N0X7 666 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 GHDCQ8N2G8 530 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 OR8K5Q8NH50 307 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 TOX2Q96NM4 488 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 RC3H2Q9HBD1 1191 aaKnown RBP8.1□□□□□ -1.11
PTPRK-206ENST00000368215 GPR83Q9NYM4 423 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 ADAM30Q9UKF2 790 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 RBBP6Q7Z6E9 1792 aaKnown RBP8.1□□□□□ -1.11
PTPRK-206ENST00000368215 A0A1W2PQU0 124 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 OR52A4PA6NMU1 304 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 GSTM2P28161 218 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 IMPA1P29218 277 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 KCNC4Q03721 635 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 HLA-DQA1Q5Y7H0 255 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 POMZP3Q6PJE2 187 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 FAM92BQ6ZTR7 304 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 USP43Q70EL4 1123 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 DPPA4Q7L190 304 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 ZSWIM9Q86XI8 627 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 PTRH1Q86Y79 214 aaKnown RBP8.1□□□□□ -1.11
PTPRK-206ENST00000368215 COX18Q8N8Q8 333 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 CHDHQ8NE62 594 aaPredicted RBP8.1□□□□□ -1.11
PTPRK-206ENST00000368215 DTD2Q96FN9 168 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 SPACA7Q96KW9 195 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 DPH7Q9BTV6 452 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 BHLHE41Q9C0J9 482 aaPredicted RBP8.1□□□□□ -1.11
PTPRK-206ENST00000368215 ZBP1Q9H171 429 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 EHD1Q9H4M9 534 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 HCFC2Q9Y5Z7 792 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 VEGFDO43915 354 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 VLDLRP98155 873 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 FADDQ13158 208 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 LRRC26Q2I0M4 334 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 ALG1LQ6GMV1 187 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 TRIM46Q7Z4K8 759 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 PEX5LQ8IYB4 626 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 NRSN1Q8IZ57 195 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 TTLQ8NG68 377 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 ZNF671Q8TAW3 534 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 LGALS12Q96DT0 336 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 TMEM19Q96HH6 336 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 PIP5K1AQ99755 562 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 TUBA1CQ9BQE3 449 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 RSPH9Q9H1X1 276 aaPredicted RBP8.1□□□□□ -1.11
PTPRK-206ENST00000368215 IL21Q9HBE4 155 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 IL1RAPQ9NPH3 570 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 TMEM45AQ9NWC5 275 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 MAFFQ9ULX9 164 aa8.1□□□□□ -1.11
PTPRK-206ENST00000368215 RPL36Q9Y3U8 105 aaKnown RBP8.1□□□□□ -1.11
PTPRK-206ENST00000368215 ANHXE9PGG2 379 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 HBA1P69905 142 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 SLAMF1Q13291 335 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 UGT8Q16880 541 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 HNRNPA1L2Q32P51 320 aaKnown RBP8.09□□□□□ -1.11
PTPRK-206ENST00000368215 RNASE12Q5GAN4 147 aaKnown RBP8.09□□□□□ -1.11
PTPRK-206ENST00000368215 TMPRSS11AQ6ZMR5 421 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 SLC15A4Q8N697 577 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 FAM98AQ8NCA5 519 aaKnown RBP8.09□□□□□ -1.11
PTPRK-206ENST00000368215 OR52N2Q8NGI0 321 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 OR5P2Q8WZ92 322 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 RAB11FIP5Q9BXF6 653 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 TMEM121BQ9BXQ6 578 aaPredicted RBP8.09□□□□□ -1.11
PTPRK-206ENST00000368215 LMAN2LQ9H0V9 348 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 DMRT3Q9NQL9 472 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 FAM170BA6NMN3 283 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 GRXCR1A8MXD5 290 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 B3GALT2O43825 422 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 BCAS1O75363 584 aaPredicted RBP8.09□□□□□ -1.11
PTPRK-206ENST00000368215 C1orf105O95561 183 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 ASGR2P07307 311 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 ALOX5P09917 674 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 POLR2CP19387 275 aaPredicted RBP8.09□□□□□ -1.11
PTPRK-206ENST00000368215 CRHBPP24387 322 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 PIGAP37287 484 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 TPTEP56180 551 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 RBBP4Q09028 425 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 TPRG1LQ5T0D9 272 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 CPZQ66K79 652 aa8.09□□□□□ -1.11
PTPRK-206ENST00000368215 METTL2BQ6P1Q9 378 aaKnown RBP8.09□□□□□ -1.11
PTPRK-206ENST00000368215 ZNF675Q8TD23 568 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms