RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 C6orf120Q7Z4R8 191 aa16.46■□□□□ 0.23
SLC1A4-201ENST00000234256 SLC5A8Q8N695 610 aa16.46■□□□□ 0.23
SLC1A4-201ENST00000234256 KLHDC9Q8NEP7 349 aa16.46■□□□□ 0.23
SLC1A4-201ENST00000234256 CENPMQ9NSP4 180 aa16.46■□□□□ 0.23
SLC1A4-201ENST00000234256 ZNF224Q9NZL3 707 aa16.46■□□□□ 0.23
SLC1A4-201ENST00000234256 IL20RAQ9UHF4 553 aa16.46■□□□□ 0.23
SLC1A4-201ENST00000234256 HMX2A2RU54 273 aa16.46■□□□□ 0.23
SLC1A4-201ENST00000234256 CDC123O75794 336 aaPredicted RBP16.46■□□□□ 0.23
SLC1A4-201ENST00000234256 XKR4Q5GH76 650 aa16.46■□□□□ 0.23
SLC1A4-201ENST00000234256 NAGSQ8N159 534 aa16.46■□□□□ 0.23
SLC1A4-201ENST00000234256 LMNTD1Q8N9Z9 388 aa16.46■□□□□ 0.23
SLC1A4-201ENST00000234256 NEK7Q8TDX7 302 aa16.46■□□□□ 0.23
SLC1A4-201ENST00000234256 OVCA2Q8WZ82 227 aa16.46■□□□□ 0.23
SLC1A4-201ENST00000234256 RHBDF1Q96CC6 855 aa16.46■□□□□ 0.23
SLC1A4-201ENST00000234256 ATOH8Q96SQ7 321 aa16.46■□□□□ 0.23
SLC1A4-201ENST00000234256 CACNA1SQ13698 1873 aa16.46■□□□□ 0.23
SLC1A4-201ENST00000234256 MRPL3P09001 348 aaKnown RBP16.46■□□□□ 0.22
SLC1A4-201ENST00000234256 SRCP12931 536 aa16.46■□□□□ 0.22
SLC1A4-201ENST00000234256 MYF6P23409 242 aa16.46■□□□□ 0.22
SLC1A4-201ENST00000234256 PHC1P78364 1004 aa16.46■□□□□ 0.22
SLC1A4-201ENST00000234256 VLDLRP98155 873 aa16.46■□□□□ 0.22
SLC1A4-201ENST00000234256 CES4AQ5XG92 561 aa16.46■□□□□ 0.22
SLC1A4-201ENST00000234256 TMEM80Q96HE8 168 aa16.46■□□□□ 0.22
SLC1A4-201ENST00000234256 CNDP2Q96KP4 475 aaKnown RBP16.46■□□□□ 0.22
SLC1A4-201ENST00000234256 ANKRD60Q9BZ19 345 aa16.46■□□□□ 0.22
SLC1A4-201ENST00000234256 PNO1Q9NRX1 252 aaKnown RBP16.46■□□□□ 0.22
SLC1A4-201ENST00000234256 TBC1D24Q9ULP9 559 aa16.46■□□□□ 0.22
SLC1A4-201ENST00000234256 CLCA3PQ9Y6N3 262 aa16.46■□□□□ 0.22
SLC1A4-201ENST00000234256 NUP214P35658 2090 aaPredicted RBP16.46■□□□□ 0.22
SLC1A4-201ENST00000234256 PCDHGA12O60330 932 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 ACSL1P33121 698 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 DNASE1L1P49184 302 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 BCAP31P51572 246 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 AP2S1P53680 142 aaPredicted RBP16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 CBLBQ13191 982 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 PGM2L1Q6PCE3 622 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 FNDC8Q8TC99 324 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 MZB1Q8WU39 189 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 MND1Q9BWT6 205 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 RBM7Q9Y580 266 aaKnown RBP16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 BLOC1S5-TXNDC5H3BN57 136 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 M0R129 80 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 HOXB2P14652 356 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 GBX2P52951 348 aaPredicted RBP16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 FPGSQ05932 587 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 PTGES3Q15185 160 aaKnown RBP16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 PGBD2Q6P3X8 592 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 ZNF783Q6ZMS7 281 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 ERN2Q76MJ5 926 aaKnown RBP16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 MAVSQ7Z434 540 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 OR4N5Q8IXE1 308 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 LSMEM2Q8N112 164 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 METTL21AQ8WXB1 218 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 SMPDL3BQ92485 455 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 GPN1Q9HCN4 374 aaPredicted RBP16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 USP3Q9Y6I4 520 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 TFAP2AP05549 437 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 CD2P06729 351 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 PTGER1P34995 402 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 POLR2IP36954 125 aaKnown RBP16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 GRSF1Q12849 480 aaKnown RBP eCLIP16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 RCAN2Q14206 197 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 COMMD6Q7Z4G1 85 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 LILRA2Q8N149 483 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 SLC15A4Q8N697 577 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 OR7G3Q8NG95 312 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 MS4A4AQ96JQ5 239 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 PHOX2BQ99453 314 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 OR51I1Q9H343 314 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 CSNK1G1Q9HCP0 422 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 ARMC1Q9NVT9 282 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 FKBP7Q9Y680 259 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 MYH14Q7Z406 1995 aaKnown RBP16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 SH3PXD2BA1X283 911 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 C7orf72A4D263 438 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 RPS17P08708 135 aaKnown RBP16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 CYBAP13498 195 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 BMP8BP34820 402 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 PRMT2P55345 433 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 CATSPEREQ5SY80 951 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 BMP8AQ7Z5Y6 402 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 TM9SF2Q99805 663 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 TTYH2Q9BSA4 534 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 DPH7Q9BTV6 452 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 RNF38Q9H0F5 515 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 EIF3KQ9UBQ5 218 aaKnown RBP16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 RIMS3Q9UJD0 308 aa16.45■□□□□ 0.22
SLC1A4-201ENST00000234256 SEC16AO15027 2179 aa16.44■□□□□ 0.22
SLC1A4-201ENST00000234256 ADAMTS7Q9UKP4 1686 aa16.44■□□□□ 0.22
SLC1A4-201ENST00000234256 MUSKO15146 869 aa16.44■□□□□ 0.22
SLC1A4-201ENST00000234256 IL12BP29460 328 aa16.44■□□□□ 0.22
SLC1A4-201ENST00000234256 HSF2Q03933 536 aa16.44■□□□□ 0.22
SLC1A4-201ENST00000234256 PUM1Q14671 1186 aaKnown RBP eCLIP16.44■□□□□ 0.22
SLC1A4-201ENST00000234256 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.44■□□□□ 0.22
SLC1A4-201ENST00000234256 CAMKVQ8NCB2 501 aa16.44■□□□□ 0.22
SLC1A4-201ENST00000234256 DPYSL5Q9BPU6 564 aa16.44■□□□□ 0.22
SLC1A4-201ENST00000234256 MMP27Q9H306 513 aa16.44■□□□□ 0.22
SLC1A4-201ENST00000234256 ARNT2Q9HBZ2 717 aa16.44■□□□□ 0.22
SLC1A4-201ENST00000234256 MGAT4BQ9UQ53 548 aa16.44■□□□□ 0.22
SLC1A4-201ENST00000234256 HEMK1Q9Y5R4 338 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms