RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 LGI4Q8N135 537 aa7.72□□□□□ -1.17
GPC3-204ENST00000631057 KRT78Q8N1N4 520 aa7.72□□□□□ -1.17
GPC3-204ENST00000631057 KIAA1958Q8N8K9 716 aa7.72□□□□□ -1.17
GPC3-204ENST00000631057 TMIEQ8NEW7 156 aa7.72□□□□□ -1.17
GPC3-204ENST00000631057 NFKBIDQ8NI38 313 aa7.72□□□□□ -1.17
GPC3-204ENST00000631057 WDR48Q8TAF3 677 aa7.72□□□□□ -1.17
GPC3-204ENST00000631057 RNF217Q8TC41 542 aa7.72□□□□□ -1.17
GPC3-204ENST00000631057 DYNC2LI1Q8TCX1 351 aa7.72□□□□□ -1.17
GPC3-204ENST00000631057 APH1BQ8WW43 257 aa7.72□□□□□ -1.17
GPC3-204ENST00000631057 OR8D1Q8WZ84 308 aa7.72□□□□□ -1.17
GPC3-204ENST00000631057 DNASE1L2Q92874 299 aa7.72□□□□□ -1.17
GPC3-204ENST00000631057 SLC38A4Q969I6 547 aa7.72□□□□□ -1.17
GPC3-204ENST00000631057 TAMM41Q96BW9 452 aa7.72□□□□□ -1.17
GPC3-204ENST00000631057 LINC00615Q96LM1 132 aaPredicted RBP7.72□□□□□ -1.17
GPC3-204ENST00000631057 DMRTB1Q96MA1 342 aa7.72□□□□□ -1.17
GPC3-204ENST00000631057 KCNC2Q96PR1 638 aa7.72□□□□□ -1.17
GPC3-204ENST00000631057 FEVQ99581 238 aa7.72□□□□□ -1.17
GPC3-204ENST00000631057 PSD2Q9BQI7 771 aa7.72□□□□□ -1.17
GPC3-204ENST00000631057 COPS4Q9BT78 406 aa7.72□□□□□ -1.17
GPC3-204ENST00000631057 ITPAQ9BY32 194 aa7.72□□□□□ -1.17
GPC3-204ENST00000631057 OR51B5Q9H339 312 aa7.72□□□□□ -1.17
GPC3-204ENST00000631057 DPEP2Q9H4A9 486 aa7.72□□□□□ -1.17
GPC3-204ENST00000631057 C11orf49Q9H6J7 331 aa7.72□□□□□ -1.17
GPC3-204ENST00000631057 ZNF556Q9HAH1 456 aa7.72□□□□□ -1.17
GPC3-204ENST00000631057 TRIM39Q9HCM9 518 aa7.72□□□□□ -1.17
GPC3-204ENST00000631057 GPATCH2Q9NW75 528 aa7.72□□□□□ -1.17
GPC3-204ENST00000631057 IRAK4Q9NWZ3 460 aa7.72□□□□□ -1.17
GPC3-204ENST00000631057 AHSPQ9NZD4 102 aa7.72□□□□□ -1.17
GPC3-204ENST00000631057 GULP1Q9UBP9 304 aa7.72□□□□□ -1.17
GPC3-204ENST00000631057 PSORS1C1Q9UIG5 152 aa7.72□□□□□ -1.17
GPC3-204ENST00000631057 SH2B3Q9UQQ2 575 aa7.72□□□□□ -1.17
GPC3-204ENST00000631057 SLC27A6Q9Y2P4 619 aa7.72□□□□□ -1.17
GPC3-204ENST00000631057 WBP11Q9Y2W2 641 aaKnown RBP7.72□□□□□ -1.17
GPC3-204ENST00000631057 SH3GLB1Q9Y371 365 aa7.72□□□□□ -1.17
GPC3-204ENST00000631057 CKAP5Q14008 2032 aa7.72□□□□□ -1.17
GPC3-204ENST00000631057 EDDM13A0A1B0GTR0 161 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 A0A1W2PRB8 838 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 FUOMA2VDF0 154 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 ARRDC5A6NEK1 342 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 KIAA0355O15063 1070 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 SPINT1O43278 529 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 TPD52L2O43399 206 aaKnown RBP7.71□□□□□ -1.17
GPC3-204ENST00000631057 VEGFDO43915 354 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 SEMA3DO95025 777 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 TGFB1P01137 390 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 KLK1P06870 262 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 HLA-EP13747 358 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 CD36P16671 472 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 UQCRC2P22695 453 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 KELP23276 732 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 ITGB8P26012 769 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 IDUAP35475 653 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 SOAT1P35610 550 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 TGFBR2P37173 567 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 CD97P48960 835 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 CDH12P55289 794 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 VBP1P61758 197 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 TUBA1BP68363 451 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 EEF1A2Q05639 463 aaKnown RBP7.71□□□□□ -1.17
GPC3-204ENST00000631057 DPTQ07507 201 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 CYP2A13Q16696 494 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 EXOC3L2Q2M3D2 409 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 FBXO43Q4G163 708 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 FNDC3BQ53EP0 1204 aaKnown RBP7.71□□□□□ -1.17
GPC3-204ENST00000631057 PRAMEF14Q5SWL7 426 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 PRAMEF13Q5VWM6 474 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 LCTLQ6UWM7 567 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 TMIGD1Q6UXZ0 262 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 ZNF852Q6ZMS4 543 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 TUBA1AQ71U36 451 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 TRMT11Q7Z4G4 463 aaKnown RBP7.71□□□□□ -1.17
GPC3-204ENST00000631057 TSEN54Q7Z6J9 526 aaKnown RBP7.71□□□□□ -1.17
GPC3-204ENST00000631057 ZNF605Q86T29 641 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 TRIM74Q86UV6 250 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 RNF130Q86XS8 419 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 ARMC8Q8IUR7 673 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 EGFL6Q8IUX8 553 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 LRRC56Q8IYG6 542 aaPredicted RBP7.71□□□□□ -1.17
GPC3-204ENST00000631057 MFSD4AQ8N468 514 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 DNAJC22Q8N4W6 341 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 SLC5A8Q8N695 610 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 NATD1Q8N6N6 113 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 CELF5Q8N6W0 485 aaKnown RBP7.71□□□□□ -1.17
GPC3-204ENST00000631057 ZNF366Q8N895 744 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 DENND6BQ8NEG7 585 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 OR6Q1Q8NGQ2 317 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 OR2L2Q8NH16 312 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 RHOXF1Q8NHV9 184 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 CIDECQ96AQ7 238 aaPredicted RBP7.71□□□□□ -1.17
GPC3-204ENST00000631057 RAD51AP1Q96B01 352 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 ZSWIM3Q96MP5 696 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 SAMD11Q96NU1 681 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 PIP5K1AQ99755 562 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 RHNO1Q9BSD3 238 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 MROQ9BYG7 248 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 IL23AQ9NPF7 189 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 C1GALT1Q9NS00 363 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 CHCHD3Q9NX63 227 aaKnown RBP7.71□□□□□ -1.17
GPC3-204ENST00000631057 LMCD1Q9NZU5 365 aa7.71□□□□□ -1.17
GPC3-204ENST00000631057 DAPK2Q9UIK4 370 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms