RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 BBS10Q8TAM1 723 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 UBA3Q8TBC4 463 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 ZNF606Q8WXB4 792 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 DNASE2BQ8WZ79 361 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 SHC3Q92529 594 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 RMDN1Q96DB5 314 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 PIWIL1Q96J94 861 aaKnown RBP3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 FEM1CQ96JP0 617 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 C1orf74Q96LT6 269 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 SERPINB11Q96P15 392 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 GABRG3Q99928 467 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 TRIM62Q9BVG3 475 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 BBS2Q9BXC9 721 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 ULBP1Q9BZM6 244 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 LHX5Q9H2C1 402 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 MAGIXQ9H6Y5 334 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 SIX2Q9NPC8 291 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 UBE2TQ9NPD8 197 aaPredicted RBP3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 KRT84Q9NSB2 600 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 DNAJC17Q9NVM6 304 aaKnown RBP3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 CWC15Q9P013 229 aaKnown RBP3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 THAP10Q9P2Z0 257 aaPredicted RBP3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 UBA2Q9UBT2 640 aaPredicted RBP3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 KLHL20Q9Y2M5 609 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 OR2W1Q9Y3N9 320 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 PLXNA2O75051 1894 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 MAP1BP46821 2468 aaKnown RBP3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 ITIH6Q6UXX5 1313 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 ANKRD36A6QL64 1941 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 TRPM6Q9BX84 2022 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 KNTC1P50748 2209 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 CEP295Q9C0D2 2601 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 EPG5Q9HCE0 2579 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 TDRD6O60522 2096 aaKnown RBP3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 PTPRBP23467 1997 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 A0A1W2PS18 150 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 BCLAF3A2AJT9 711 aaKnown RBP3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 ANTXRLA6NF34 631 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 M0QYV0 167 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 BMPR1BO00238 502 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 HS3ST1O14792 307 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 ANKRD28O15084 1053 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 PAPSS1O43252 624 aaPredicted RBP3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 ACSL4O60488 711 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 ZNF217O75362 1048 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 DAB1O75553 588 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 KLF8O95600 359 aaPredicted RBP3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 SCGB1D1O95968 90 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 IGLV3-19P01714 112 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 IGLV3-25P01717 112 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 AMD1P17707 334 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 GABRG2P18507 467 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 UGT1A1P22309 533 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 CDH5P33151 784 aaPredicted RBP3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 ANP32AP39687 249 aaKnown RBP3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 CLDN20P56880 219 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 TAS2R40P59535 323 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 EEF1A1P68104 462 aaKnown RBP3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 PRAMEP78395 509 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 MRPS34P82930 218 aaKnown RBP3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 GTF2H2Q13888 395 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 CAMK4Q16566 473 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 MYLK3Q32MK0 819 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 ZSCAN23Q3MJ62 389 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 ZNF805Q5CZA5 627 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 GKAP1Q5VSY0 366 aaPredicted RBP3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 EEF1A1P5Q5VTE0 462 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 LCN10Q6JVE6 187 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 GTF2H2CQ6P1K8 395 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 PAPD4Q6PIY7 484 aaKnown RBP3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 SARM1Q6SZW1 724 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 C1orf122Q6ZSJ8 110 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 TPGS1Q6ZTW0 290 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 ASB18Q6ZVZ8 466 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 ARCQ7LC44 396 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 DSG4Q86SJ6 1040 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 SDCCAG8Q86SQ7 713 aaPredicted RBP3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 TSPAN33Q86UF1 283 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 GPR180Q86V85 440 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 KBTBD6Q86V97 674 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 TMPRSS12Q86WS5 348 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 FAM71AQ8IYT1 594 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 MUC20Q8N307 709 aaPredicted RBP3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 ZNF397Q8NF99 534 aaPredicted RBP3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 OR1J2Q8NGS2 313 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 OR8K5Q8NH50 307 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 FIBINQ8TAL6 211 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 THAP6Q8TBB0 222 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 HM13Q8TCT9 377 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 RNF139Q8WU17 664 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 NDRG1Q92597 394 aaKnown RBP3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 SKA1Q96BD8 255 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 TMA16Q96EY4 203 aaKnown RBP3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 EGLN2Q96KS0 407 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 CMTM3Q96MX0 182 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 TUBGCP2Q9BSJ2 902 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 CRACR2AQ9BSW2 395 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 ARRDC1-AS1Q9H2J1 176 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 POPDC2Q9HBU9 364 aa3.44□□□□□ -1.86
CKS1BP3-201ENST00000600888 ELOVL2Q9NXB9 296 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 180.7 ms