RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-222ENST00000600517 EXT1Q16394 746 aa12.65□□□□□ -0.38
ARHGEF1-222ENST00000600517 BTBD16Q32M84 506 aa12.65□□□□□ -0.38
ARHGEF1-222ENST00000600517 KHDRBS2Q5VWX1 349 aaKnown RBP12.65□□□□□ -0.38
ARHGEF1-222ENST00000600517 H3F3CQ6NXT2 135 aa12.65□□□□□ -0.38
ARHGEF1-222ENST00000600517 PAPD4Q6PIY7 484 aaKnown RBP12.65□□□□□ -0.38
ARHGEF1-222ENST00000600517 IQCKQ8N0W5 287 aa12.65□□□□□ -0.38
ARHGEF1-222ENST00000600517 SIRT6Q8N6T7 355 aa12.65□□□□□ -0.38
ARHGEF1-222ENST00000600517 HUS1BQ8NHY5 278 aa12.65□□□□□ -0.38
ARHGEF1-222ENST00000600517 CPT1CQ8TCG5 803 aa12.65□□□□□ -0.38
ARHGEF1-222ENST00000600517 ADAMTS18Q8TE60 1221 aa12.65□□□□□ -0.38
ARHGEF1-222ENST00000600517 REPS1Q96D71 796 aa12.65□□□□□ -0.38
ARHGEF1-222ENST00000600517 KCNC2Q96PR1 638 aa12.65□□□□□ -0.38
ARHGEF1-222ENST00000600517 LPAR4Q99677 370 aa12.65□□□□□ -0.38
ARHGEF1-222ENST00000600517 NTMT1Q9BV86 223 aa12.65□□□□□ -0.38
ARHGEF1-222ENST00000600517 C1QTNF3Q9BXJ4 246 aa12.65□□□□□ -0.38
ARHGEF1-222ENST00000600517 NOL11Q9H8H0 719 aaKnown RBP12.65□□□□□ -0.38
ARHGEF1-222ENST00000600517 ZBTB26Q9HCK0 441 aa12.65□□□□□ -0.38
ARHGEF1-222ENST00000600517 NECTIN3Q9NQS3 549 aa12.65□□□□□ -0.38
ARHGEF1-222ENST00000600517 PSD3Q9NYI0 1048 aa12.65□□□□□ -0.38
ARHGEF1-222ENST00000600517 KCMF1Q9P0J7 381 aa12.65□□□□□ -0.38
ARHGEF1-222ENST00000600517 TMEM216Q9P0N5 145 aa12.65□□□□□ -0.38
ARHGEF1-222ENST00000600517 LUZP4Q9P127 313 aa12.65□□□□□ -0.38
ARHGEF1-222ENST00000600517 PCTPQ9UKL6 214 aa12.65□□□□□ -0.38
ARHGEF1-222ENST00000600517 DAPP1Q9UN19 280 aa12.65□□□□□ -0.38
ARHGEF1-222ENST00000600517 PLAAQ9Y263 795 aa12.65□□□□□ -0.38
ARHGEF1-222ENST00000600517 RNF11Q9Y3C5 154 aa12.65□□□□□ -0.38
ARHGEF1-222ENST00000600517 MMACHCQ9Y4U1 282 aa12.65□□□□□ -0.38
ARHGEF1-222ENST00000600517 NUP210LQ5VU65 1888 aa12.64□□□□□ -0.39
ARHGEF1-222ENST00000600517 TCRBV16S1A1N1A0A5B0 115 aa12.64□□□□□ -0.39
ARHGEF1-222ENST00000600517 CYR61O00622 381 aa12.64□□□□□ -0.39
ARHGEF1-222ENST00000600517 CLDN4O14493 209 aa12.64□□□□□ -0.39
ARHGEF1-222ENST00000600517 OR7A17O14581 309 aa12.64□□□□□ -0.39
ARHGEF1-222ENST00000600517 SCELO95171 688 aa12.64□□□□□ -0.39
ARHGEF1-222ENST00000600517 SHBGP04278 402 aa12.64□□□□□ -0.39
ARHGEF1-222ENST00000600517 ATP5A1P25705 553 aaKnown RBP12.64□□□□□ -0.39
ARHGEF1-222ENST00000600517 CERS1P27544 350 aa12.64□□□□□ -0.39
ARHGEF1-222ENST00000600517 TSFMP43897 325 aaKnown RBP12.64□□□□□ -0.39
ARHGEF1-222ENST00000600517 ARFIP1P53367 373 aa12.64□□□□□ -0.39
ARHGEF1-222ENST00000600517 LIM2P55344 173 aa12.64□□□□□ -0.39
ARHGEF1-222ENST00000600517 RCN2Q14257 317 aa12.64□□□□□ -0.39
ARHGEF1-222ENST00000600517 RASA2Q15283 850 aa12.64□□□□□ -0.39
ARHGEF1-222ENST00000600517 TLR1Q15399 786 aa12.64□□□□□ -0.39
ARHGEF1-222ENST00000600517 ZRSR2Q15696 482 aaKnown RBP12.64□□□□□ -0.39
ARHGEF1-222ENST00000600517 CPSF6Q16630 551 aaKnown RBP eCLIP12.64□□□□□ -0.39
ARHGEF1-222ENST00000600517 AP5B1Q2VPB7 878 aa12.64□□□□□ -0.39
ARHGEF1-222ENST00000600517 CUZD1Q86UP6 607 aa12.64□□□□□ -0.39
ARHGEF1-222ENST00000600517 TDRPQ86YL5 185 aa12.64□□□□□ -0.39
ARHGEF1-222ENST00000600517 MYLK4Q86YV6 388 aaPredicted RBP12.64□□□□□ -0.39
ARHGEF1-222ENST00000600517 ZNF595Q8IYB9 648 aa12.64□□□□□ -0.39
ARHGEF1-222ENST00000600517 ACOT4Q8N9L9 421 aa12.64□□□□□ -0.39
ARHGEF1-222ENST00000600517 ARMC2Q8NEN0 867 aa12.64□□□□□ -0.39
ARHGEF1-222ENST00000600517 OR52B6Q8NGF0 335 aa12.64□□□□□ -0.39
ARHGEF1-222ENST00000600517 UBLCP1Q8WVY7 318 aaPredicted RBP12.64□□□□□ -0.39
ARHGEF1-222ENST00000600517 HAS2Q92819 552 aa12.64□□□□□ -0.39
ARHGEF1-222ENST00000600517 ATP6V1E2Q96A05 226 aa12.64□□□□□ -0.39
ARHGEF1-222ENST00000600517 ILKAPQ9H0C8 392 aaPredicted RBP12.64□□□□□ -0.39
ARHGEF1-222ENST00000600517 OR51B5Q9H339 312 aa12.64□□□□□ -0.39
ARHGEF1-222ENST00000600517 CLMPQ9H6B4 373 aa12.64□□□□□ -0.39
ARHGEF1-222ENST00000600517 COPS7BQ9H9Q2 264 aaPredicted RBP12.64□□□□□ -0.39
ARHGEF1-222ENST00000600517 PPCSQ9HAB8 311 aa12.64□□□□□ -0.39
ARHGEF1-222ENST00000600517 LYRM4Q9HD34 91 aa12.64□□□□□ -0.39
ARHGEF1-222ENST00000600517 MMP25Q9NPA2 562 aa12.64□□□□□ -0.39
ARHGEF1-222ENST00000600517 TBK1Q9UHD2 729 aa12.64□□□□□ -0.39
ARHGEF1-222ENST00000600517 CSAG2Q9Y5P2 127 aa12.64□□□□□ -0.39
ARHGEF1-222ENST00000600517 A8MT66 165 aa12.63□□□□□ -0.39
ARHGEF1-222ENST00000600517 A8MUI8 341 aa12.63□□□□□ -0.39
ARHGEF1-222ENST00000600517 FOXE1O00358 373 aaPredicted RBP12.63□□□□□ -0.39
ARHGEF1-222ENST00000600517 RTCAO00442 366 aaKnown RBP12.63□□□□□ -0.39
ARHGEF1-222ENST00000600517 CTNSO60931 367 aa12.63□□□□□ -0.39
ARHGEF1-222ENST00000600517 SH3BGRLO75368 114 aa12.63□□□□□ -0.39
ARHGEF1-222ENST00000600517 GSTA1P08263 222 aa12.63□□□□□ -0.39
ARHGEF1-222ENST00000600517 RPS17P08708 135 aaKnown RBP12.63□□□□□ -0.39
ARHGEF1-222ENST00000600517 PYGBP11216 843 aa12.63□□□□□ -0.39
ARHGEF1-222ENST00000600517 HIST1H1TP22492 207 aaPredicted RBP12.63□□□□□ -0.39
ARHGEF1-222ENST00000600517 NEK2P51955 445 aa12.63□□□□□ -0.39
ARHGEF1-222ENST00000600517 CCNG1P51959 295 aa12.63□□□□□ -0.39
ARHGEF1-222ENST00000600517 HNRNPFP52597 415 aaKnown RBP12.63□□□□□ -0.39
ARHGEF1-222ENST00000600517 SLC26A5P58743 744 aa12.63□□□□□ -0.39
ARHGEF1-222ENST00000600517 TRAF3Q13114 568 aa12.63□□□□□ -0.39
ARHGEF1-222ENST00000600517 CUL3Q13618 768 aa12.63□□□□□ -0.39
ARHGEF1-222ENST00000600517 DDX39BQ13838 428 aaKnown RBP12.63□□□□□ -0.39
ARHGEF1-222ENST00000600517 B3GNTL1Q67FW5 361 aaPredicted RBP12.63□□□□□ -0.39
ARHGEF1-222ENST00000600517 OR4C11Q6IEV9 310 aa12.63□□□□□ -0.39
ARHGEF1-222ENST00000600517 ZNF793Q6ZN11 406 aa12.63□□□□□ -0.39
ARHGEF1-222ENST00000600517 SH2D5Q6ZV89 423 aa12.63□□□□□ -0.39
ARHGEF1-222ENST00000600517 SCUBE1Q8IWY4 988 aa12.63□□□□□ -0.39
ARHGEF1-222ENST00000600517 RNF175Q8N4F7 328 aa12.63□□□□□ -0.39
ARHGEF1-222ENST00000600517 EFCAB3Q8N7B9 438 aa12.63□□□□□ -0.39
ARHGEF1-222ENST00000600517 TMEM52Q8NDY8 209 aa12.63□□□□□ -0.39
ARHGEF1-222ENST00000600517 CATSPER1Q8NEC5 780 aa12.63□□□□□ -0.39
ARHGEF1-222ENST00000600517 WDR20Q8TBZ3 569 aa12.63□□□□□ -0.39
ARHGEF1-222ENST00000600517 ELP5Q8TE02 316 aa12.63□□□□□ -0.39
ARHGEF1-222ENST00000600517 ZNF483Q8TF39 744 aaPredicted RBP12.63□□□□□ -0.39
ARHGEF1-222ENST00000600517 RGMAQ96B86 450 aa12.63□□□□□ -0.39
ARHGEF1-222ENST00000600517 SNRNP40Q96DI7 357 aaKnown RBP12.63□□□□□ -0.39
ARHGEF1-222ENST00000600517 ZNF354BQ96LW1 612 aa12.63□□□□□ -0.39
ARHGEF1-222ENST00000600517 NSUN5Q96P11 429 aaKnown RBP12.63□□□□□ -0.39
ARHGEF1-222ENST00000600517 MTERF1Q99551 399 aaKnown RBP12.63□□□□□ -0.39
ARHGEF1-222ENST00000600517 RNF32Q9H0A6 362 aa12.63□□□□□ -0.39
ARHGEF1-222ENST00000600517 DMRT3Q9NQL9 472 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms