RNA–Protein interactions for RNA: ENST00000593282.5

LINC01539-206, Transcript of long intergenic non-protein coding RNA 1539, human

TSL 4 BASIC

Gene LINC01539, Length 678 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01539-206	ENST00000593282	PPP3CC	P48454	512 aa		4.1	□□□□□ -1.75
LINC01539-206	ENST00000593282	TNFSF10	P50591	281 aa		4.1	□□□□□ -1.75
LINC01539-206	ENST00000593282	SUCLG1	P53597	346 aa	Known RBP	4.1	□□□□□ -1.75
LINC01539-206	ENST00000593282	HNRNPH2	P55795	449 aa	Known RBP	4.1	□□□□□ -1.75
LINC01539-206	ENST00000593282	P2RX3	P56373	397 aa		4.1	□□□□□ -1.75
LINC01539-206	ENST00000593282	TMPRSS3	P57727	454 aa		4.1	□□□□□ -1.75
LINC01539-206	ENST00000593282	CD81	P60033	236 aa		4.1	□□□□□ -1.75
LINC01539-206	ENST00000593282	HAND2	P61296	217 aa		4.1	□□□□□ -1.75
LINC01539-206	ENST00000593282	RPS8	P62241	208 aa	Known RBP	4.1	□□□□□ -1.75
LINC01539-206	ENST00000593282	FKBP1B	P68106	108 aa		4.1	□□□□□ -1.75
LINC01539-206	ENST00000593282	MBTD1	Q05BQ5	628 aa		4.1	□□□□□ -1.75
LINC01539-206	ENST00000593282	CACNG1	Q06432	222 aa		4.1	□□□□□ -1.75
LINC01539-206	ENST00000593282	SLC3A1	Q07837	685 aa		4.1	□□□□□ -1.75
LINC01539-206	ENST00000593282	CRYZ	Q08257	329 aa	Known RBP	4.1	□□□□□ -1.75
LINC01539-206	ENST00000593282	SRSF5	Q13243	272 aa	Known RBP	4.1	□□□□□ -1.75
LINC01539-206	ENST00000593282	KRT31	Q15323	416 aa		4.1	□□□□□ -1.75
LINC01539-206	ENST00000593282	EFNB3	Q15768	340 aa		4.1	□□□□□ -1.75
LINC01539-206	ENST00000593282	RBBP7	Q16576	425 aa		4.1	□□□□□ -1.75
LINC01539-206	ENST00000593282	STX1A	Q16623	288 aa		4.1	□□□□□ -1.75
LINC01539-206	ENST00000593282	CCDC57	Q2TAC2	916 aa		4.1	□□□□□ -1.75
LINC01539-206	ENST00000593282	FCRLB	Q6BAA4	426 aa		4.1	□□□□□ -1.75
LINC01539-206	ENST00000593282	C11orf63	Q6NUN7	778 aa		4.1	□□□□□ -1.75
LINC01539-206	ENST00000593282	PACS1	Q6VY07	963 aa		4.1	□□□□□ -1.75
LINC01539-206	ENST00000593282	CDHR3	Q6ZTQ4	885 aa		4.1	□□□□□ -1.75
LINC01539-206	ENST00000593282	SHF	Q7M4L6	423 aa		4.1	□□□□□ -1.75
LINC01539-206	ENST00000593282	ZNF367	Q7RTV3	350 aa		4.1	□□□□□ -1.75
LINC01539-206	ENST00000593282	ERAS	Q7Z444	233 aa		4.1	□□□□□ -1.75
LINC01539-206	ENST00000593282	BNIPL	Q7Z465	357 aa		4.1	□□□□□ -1.75
LINC01539-206	ENST00000593282	C11orf24	Q96F05	449 aa	Predicted RBP	4.1	□□□□□ -1.75
LINC01539-206	ENST00000593282	PGM2	Q96G03	612 aa		4.1	□□□□□ -1.75
LINC01539-206	ENST00000593282	CBWD1	Q9BRT8	395 aa		4.1	□□□□□ -1.75
LINC01539-206	ENST00000593282	PRRG4	Q9BZD6	226 aa		4.1	□□□□□ -1.75
LINC01539-206	ENST00000593282	DCLRE1B	Q9H816	532 aa		4.1	□□□□□ -1.75
LINC01539-206	ENST00000593282	PHPT1	Q9NRX4	125 aa	Predicted RBP	4.1	□□□□□ -1.75
LINC01539-206	ENST00000593282	ACOXL	Q9NUZ1	547 aa		4.1	□□□□□ -1.75
LINC01539-206	ENST00000593282	RDH8	Q9NYR8	311 aa		4.1	□□□□□ -1.75
LINC01539-206	ENST00000593282	PKD2L2	Q9NZM6	624 aa		4.1	□□□□□ -1.75
LINC01539-206	ENST00000593282	FBXL2	Q9UKC9	423 aa		4.1	□□□□□ -1.75
LINC01539-206	ENST00000593282	MRPS33	Q9Y291	106 aa	Known RBP	4.1	□□□□□ -1.75
LINC01539-206	ENST00000593282	MRPL11	Q9Y3B7	192 aa	Known RBP	4.1	□□□□□ -1.75
LINC01539-206	ENST00000593282	ATXN2	Q99700	1313 aa	Known RBP	4.1	□□□□□ -1.75
LINC01539-206	ENST00000593282	PLEKHG2	Q9H7P9	1386 aa		4.1	□□□□□ -1.75
LINC01539-206	ENST00000593282	PRAG1	Q86YV5	1406 aa		4.1	□□□□□ -1.75
LINC01539-206	ENST00000593282	WNK3	Q9BYP7	1800 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	KIR2DS5	A0A0G2JLQ3	304 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	HYKK	A2RU49	373 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	GSAP	A4D1B5	854 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	HELT	A6NFD8	242 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	C4orf47	A7E2U8	309 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282		A8MUI8	341 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	STMND1	H3BQB6	276 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	KIR2DS3	K7RE56	304 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	SLC22A2	O15244	555 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	POLR2D	O15514	142 aa	Known RBP	4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	ECE2	O60344	883 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	SNX3	O60493	162 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	SDC3	O75056	442 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	LDB3	O75112	727 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	GMNN	O75496	209 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	PIGN	O95427	931 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	AGT	P01019	485 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	LDLR	P01130	860 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	S100A9	P06702	114 aa	Known RBP	4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	SERPINF2	P08697	491 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	TPM1	P09493	284 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	FCAR	P24071	287 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	PPP2R1A	P30153	589 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	RFC2	P35250	354 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	CHI3L1	P36222	383 aa	Predicted RBP	4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	CAPG	P40121	348 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	SSR1	P43307	286 aa	Known RBP	4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	SLC6A8	P48029	635 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	NR2C2	P49116	596 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	ACADVL	P49748	655 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	RGS4	P49798	205 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	PEX5	P50542	639 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	RPL23A	P62750	156 aa	Known RBP	4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	CBX1	P83916	185 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	HSF1	Q00613	529 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	MYBPC1	Q00872	1141 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	CNTN2	Q02246	1040 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	TFF2	Q03403	129 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	SLC10A2	Q12908	348 aa	Predicted RBP	4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	DMP1	Q13316	513 aa	Predicted RBP	4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	DOC2A	Q14183	400 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	SQLE	Q14534	574 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	STK11	Q15831	433 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	CA9	Q16790	459 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	POM121L1P	Q3SYA9	428 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	ARMC12	Q5T9G4	340 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	NKAIN2	Q5VXU1	208 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	SUMO4	Q6EEV6	95 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	ZNF425	Q6IV72	752 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	CBLN3	Q6UW01	205 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282		Q75L30	129 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	COMMD2	Q86X83	199 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	FAM131B	Q86XD5	332 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	ZDHHC17	Q8IUH5	632 aa		4.09	□□□□□ -1.75
LINC01539-206	ENST00000593282	FAM114A1	Q8IWE2	563 aa		4.09	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 90 ms