RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 PDAP1Q13442 181 aaKnown RBP16.14■□□□□ 0.17
RETREG3-210ENST00000590541 CAPN13Q6MZZ7 669 aaPredicted RBP16.14■□□□□ 0.17
RETREG3-210ENST00000590541 MAATS1Q7Z4T9 603 aa16.14■□□□□ 0.17
RETREG3-210ENST00000590541 BIVMQ86UB2 503 aa16.14■□□□□ 0.17
RETREG3-210ENST00000590541 OR5M9Q8NGP3 310 aa16.14■□□□□ 0.17
RETREG3-210ENST00000590541 CFAP36Q96G28 342 aa16.14■□□□□ 0.17
RETREG3-210ENST00000590541 PWWP2AQ96N64 755 aa16.14■□□□□ 0.17
RETREG3-210ENST00000590541 PTCHD1Q96NR3 888 aa16.14■□□□□ 0.17
RETREG3-210ENST00000590541 DEFB126Q9BYW3 111 aa16.14■□□□□ 0.17
RETREG3-210ENST00000590541 ZFATQ9P243 1243 aa16.14■□□□□ 0.17
RETREG3-210ENST00000590541 PDE10AQ9Y233 779 aa16.14■□□□□ 0.17
RETREG3-210ENST00000590541 FAM215AQ9Y5M1 114 aa16.14■□□□□ 0.17
RETREG3-210ENST00000590541 A0A0G2JNJ9 132 aa16.13■□□□□ 0.17
RETREG3-210ENST00000590541 PINLYPA6NC86 204 aa16.13■□□□□ 0.17
RETREG3-210ENST00000590541 FAM187AA6NFU0 413 aa16.13■□□□□ 0.17
RETREG3-210ENST00000590541 E7ESA3 106 aa16.13■□□□□ 0.17
RETREG3-210ENST00000590541 CHST10O43529 356 aa16.13■□□□□ 0.17
RETREG3-210ENST00000590541 GALR3O60755 368 aaPredicted RBP16.13■□□□□ 0.17
RETREG3-210ENST00000590541 B4GALT2O60909 372 aa16.13■□□□□ 0.17
RETREG3-210ENST00000590541 B3GALT4O96024 378 aa16.13■□□□□ 0.17
RETREG3-210ENST00000590541 GLI4P10075 376 aa16.13■□□□□ 0.17
RETREG3-210ENST00000590541 JAK1P23458 1154 aa16.13■□□□□ 0.17
RETREG3-210ENST00000590541 ACVR2AP27037 513 aa16.13■□□□□ 0.17
RETREG3-210ENST00000590541 CDKN2DP55273 166 aa16.13■□□□□ 0.17
RETREG3-210ENST00000590541 TBPL1P62380 186 aa16.13■□□□□ 0.17
RETREG3-210ENST00000590541 MGAT5Q09328 741 aa16.13■□□□□ 0.17
RETREG3-210ENST00000590541 HERC3Q15034 1050 aa16.13■□□□□ 0.17
RETREG3-210ENST00000590541 RBM20Q5T481 1227 aaKnown RBP16.13■□□□□ 0.17
RETREG3-210ENST00000590541 RTL6Q6ICC9 239 aa16.13■□□□□ 0.17
RETREG3-210ENST00000590541 PAOXQ6QHF9 649 aa16.13■□□□□ 0.17
RETREG3-210ENST00000590541 QSOX2Q6ZRP7 698 aa16.13■□□□□ 0.17
RETREG3-210ENST00000590541 CDC20BQ86Y33 519 aa16.13■□□□□ 0.17
RETREG3-210ENST00000590541 APCDD1LQ8NCL9 501 aa16.13■□□□□ 0.17
RETREG3-210ENST00000590541 ZNF740Q8NDX6 193 aa16.13■□□□□ 0.17
RETREG3-210ENST00000590541 ATL1Q8WXF7 558 aa16.13■□□□□ 0.17
RETREG3-210ENST00000590541 ANKRD7Q92527 254 aa16.13■□□□□ 0.17
RETREG3-210ENST00000590541 MBD6Q96DN6 1003 aa16.13■□□□□ 0.17
RETREG3-210ENST00000590541 LINGO1Q96FE5 620 aa16.13■□□□□ 0.17
RETREG3-210ENST00000590541 PDLIM5Q96HC4 596 aaKnown RBP16.13■□□□□ 0.17
RETREG3-210ENST00000590541 ZDHHC11Q9H8X9 412 aa16.13■□□□□ 0.17
RETREG3-210ENST00000590541 PLAC1Q9HBJ0 212 aa16.13■□□□□ 0.17
RETREG3-210ENST00000590541 Q9UFV3 132 aa16.13■□□□□ 0.17
RETREG3-210ENST00000590541 ZNF407Q9C0G0 2248 aa16.13■□□□□ 0.17
RETREG3-210ENST00000590541 IGKV3D-11A0A0A0MRZ8 115 aa16.12■□□□□ 0.17
RETREG3-210ENST00000590541 TCRBV16S1A1N1A0A5B0 115 aa16.12■□□□□ 0.17
RETREG3-210ENST00000590541 ITGA10O75578 1167 aa16.12■□□□□ 0.17
RETREG3-210ENST00000590541 ENO2P09104 434 aaPredicted RBP16.12■□□□□ 0.17
RETREG3-210ENST00000590541 SLC35G6P0C7Q6 338 aa16.12■□□□□ 0.17
RETREG3-210ENST00000590541 MAOAP21397 527 aa16.12■□□□□ 0.17
RETREG3-210ENST00000590541 DGKQP52824 942 aa16.12■□□□□ 0.17
RETREG3-210ENST00000590541 PDIA2Q13087 525 aaKnown RBP16.12■□□□□ 0.17
RETREG3-210ENST00000590541 CALCOCO2Q13137 446 aa16.12■□□□□ 0.17
RETREG3-210ENST00000590541 HECTD2Q5U5R9 776 aa16.12■□□□□ 0.17
RETREG3-210ENST00000590541 DUPD1Q68J44 220 aa16.12■□□□□ 0.17
RETREG3-210ENST00000590541 ZNF585AQ6P3V2 769 aa16.12■□□□□ 0.17
RETREG3-210ENST00000590541 AGTRAPQ6RW13 159 aa16.12■□□□□ 0.17
RETREG3-210ENST00000590541 C17orf64Q86WR6 236 aa16.12■□□□□ 0.17
RETREG3-210ENST00000590541 TMEM156Q8N614 296 aa16.12■□□□□ 0.17
RETREG3-210ENST00000590541 GPATCH11Q8N954 259 aa16.12■□□□□ 0.17
RETREG3-210ENST00000590541 MFSD9Q8NBP5 474 aa16.12■□□□□ 0.17
RETREG3-210ENST00000590541 WFDC11Q8NEX6 87 aa16.12■□□□□ 0.17
RETREG3-210ENST00000590541 KRT12Q99456 494 aa16.12■□□□□ 0.17
RETREG3-210ENST00000590541 HAUS8Q9BT25 410 aa16.12■□□□□ 0.17
RETREG3-210ENST00000590541 MOCS1Q9NZB8 636 aa16.12■□□□□ 0.17
RETREG3-210ENST00000590541 CRIM1Q9NZV1 1036 aa16.12■□□□□ 0.17
RETREG3-210ENST00000590541 TRBV11-1A0A0K0K1C0 115 aa16.11■□□□□ 0.17
RETREG3-210ENST00000590541 FAM166BA8MTA8 275 aa16.11■□□□□ 0.17
RETREG3-210ENST00000590541 A8MUA0 341 aa16.11■□□□□ 0.17
RETREG3-210ENST00000590541 TP73O15350 636 aa16.11■□□□□ 0.17
RETREG3-210ENST00000590541 EIF3HO15372 352 aaKnown RBP eCLIP16.11■□□□□ 0.17
RETREG3-210ENST00000590541 TUBB4AP04350 444 aa16.11■□□□□ 0.17
RETREG3-210ENST00000590541 GRK3P35626 688 aa16.11■□□□□ 0.17
RETREG3-210ENST00000590541 ADH7P40394 386 aa16.11■□□□□ 0.17
RETREG3-210ENST00000590541 KIR2DL3P43628 341 aa16.11■□□□□ 0.17
RETREG3-210ENST00000590541 RPL21P46778 160 aaKnown RBP16.11■□□□□ 0.17
RETREG3-210ENST00000590541 PPIAP62937 165 aaKnown RBP16.11■□□□□ 0.17
RETREG3-210ENST00000590541 MEF2AQ02078 507 aaPredicted RBP16.11■□□□□ 0.17
RETREG3-210ENST00000590541 DEFB134Q4QY38 66 aa16.11■□□□□ 0.17
RETREG3-210ENST00000590541 HP1BP3Q5SSJ5 553 aaPredicted RBP16.11■□□□□ 0.17
RETREG3-210ENST00000590541 TRMT10BQ6PF06 316 aaKnown RBP16.11■□□□□ 0.17
RETREG3-210ENST00000590541 LCTLQ6UWM7 567 aa16.11■□□□□ 0.17
RETREG3-210ENST00000590541 B3GNT6Q6ZMB0 384 aa16.11■□□□□ 0.17
RETREG3-210ENST00000590541 CAMKMTQ7Z624 323 aa16.11■□□□□ 0.17
RETREG3-210ENST00000590541 NKAPQ8N5F7 415 aaKnown RBP16.11■□□□□ 0.17
RETREG3-210ENST00000590541 PSD4Q8NDX1 1056 aa16.11■□□□□ 0.17
RETREG3-210ENST00000590541 FBXO36Q8NEA4 188 aa16.11■□□□□ 0.17
RETREG3-210ENST00000590541 SMC6Q96SB8 1091 aa16.11■□□□□ 0.17
RETREG3-210ENST00000590541 ERP44Q9BS26 406 aa16.11■□□□□ 0.17
RETREG3-210ENST00000590541 SGPP1Q9BX95 441 aa16.11■□□□□ 0.17
RETREG3-210ENST00000590541 TRIM31Q9BZY9 425 aa16.11■□□□□ 0.17
RETREG3-210ENST00000590541 TIMMDC1Q9NPL8 285 aa16.11■□□□□ 0.17
RETREG3-210ENST00000590541 NECTIN3Q9NQS3 549 aa16.11■□□□□ 0.17
RETREG3-210ENST00000590541 KCMF1Q9P0J7 381 aa16.11■□□□□ 0.17
RETREG3-210ENST00000590541 WHRNQ9P202 907 aa16.11■□□□□ 0.17
RETREG3-210ENST00000590541 ZNF223Q9UK11 482 aaPredicted RBP16.11■□□□□ 0.17
RETREG3-210ENST00000590541 ADAMTS6Q9UKP5 1117 aa16.11■□□□□ 0.17
RETREG3-210ENST00000590541 LIPGQ9Y5X9 500 aa16.11■□□□□ 0.17
RETREG3-210ENST00000590541 HRNRQ86YZ3 2850 aaPredicted RBP16.11■□□□□ 0.17
RETREG3-210ENST00000590541 DNAJC13O75165 2243 aa16.1■□□□□ 0.17
RETREG3-210ENST00000590541 OR14I1A6ND48 311 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms