RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 KRT6CP48668 564 aa11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 ARFIP1P53367 373 aa11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 SLC18A1P54219 525 aa11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 AP5B1Q2VPB7 878 aa11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 LINC00303Q3SY05 128 aa11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 ARL13AQ5H913 290 aaPredicted RBP11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 CES4AQ5XG92 561 aa11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 KIRREL2Q6UWL6 708 aa11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 ZCCHC23Q6ZST2 131 aa11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 MED25Q71SY5 747 aa11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 RAB43Q86YS6 212 aa11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 TTC9Q92623 222 aa11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 EXTL1Q92935 676 aa11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 TBC1D20Q96BZ9 403 aa11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 PKNOX2Q96KN3 472 aa11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 OR1F2PQ96R84 312 aa11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 SERPINI1Q99574 410 aa11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 SH3GL2Q99962 352 aa11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 TRMOQ9BU70 441 aa11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 ZNF717Q9BY31 904 aaPredicted RBP11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 ROGDIQ9GZN7 287 aa11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 VN1R1Q9GZP7 353 aa11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 BRF2Q9HAW0 419 aa11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 LANCL2Q9NS86 450 aa11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 LHX6Q9UPM6 363 aa11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 POLHQ9Y253 713 aa11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 HS3ST3B1Q9Y662 390 aa11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 KCNMB2Q9Y691 235 aa11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 PCSK5Q92824 1860 aa11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 TMEM120BA0PK00 339 aa11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 SERTM1A2A2V5 107 aa11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 CYR61O00622 381 aa11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 B4GALT2O60909 372 aa11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 CDC123O75794 336 aaPredicted RBP11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 SCELO95171 688 aa11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 IGHEP01854 428 aa11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 CHRNGP07510 517 aa11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 HEXBP07686 556 aa11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 FHP07954 510 aa11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 RNH1P13489 461 aaKnown RBP11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 CHN1P15882 459 aa11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 SERPINB3P29508 390 aa11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 HMOX2P30519 316 aa11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 ARRB2P32121 409 aa11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 TSFMP43897 325 aaKnown RBP11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 HTR6P50406 440 aa11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 RAP1GDS1P52306 607 aa11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 LIM2P55344 173 aa11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 WDR4P57081 412 aaKnown RBP11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 RHAGQ02094 409 aa11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 RHDQ02161 417 aa11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 ZNF33BQ06732 778 aa11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 GALNT1Q10472 559 aaPredicted RBP11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 SLAMF1Q13291 335 aa11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 ATP1A4Q13733 1029 aa11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 ABRAXAS2Q15018 415 aa11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 MINDY4Q4G0A6 757 aa11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 TTMPQ5BVD1 217 aa11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 BORAQ6PGQ7 559 aa11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 MRGPREQ86SM8 312 aa11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 CUZD1Q86UP6 607 aa11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 ANKRD42Q8N9B4 389 aa11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 PLPP5Q8NEB5 264 aa11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 APOBEC4Q8WW27 367 aaKnown RBP11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 ATP6V1G3Q96LB4 118 aa11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 IP6K3Q96PC2 410 aa11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 HBEGFQ99075 208 aa11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 CENPKQ9BS16 269 aa11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 RBCK1Q9BYM8 510 aa11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 DDX31Q9H8H2 851 aaKnown RBP11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 COPS7BQ9H9Q2 264 aaPredicted RBP11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 MLXIPLQ9NP71 852 aa11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 ZNF446Q9NWS9 450 aa11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 P4HTMQ9NXG6 502 aa11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 DAPP1Q9UN19 280 aa11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 SLC12A4Q9UP95 1085 aa11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 MAN2B2Q9Y2E5 1009 aa11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 SCN2AQ99250 2005 aa11.26□□□□□ -0.61
RABGGTA-218ENST00000560777 UQCRHLA0A096LP55 91 aa11.25□□□□□ -0.61
RABGGTA-218ENST00000560777 ARGFXA6NJG6 315 aa11.25□□□□□ -0.61
RABGGTA-218ENST00000560777 MASP2O00187 686 aa11.25□□□□□ -0.61
RABGGTA-218ENST00000560777 ALOX12BO75342 701 aa11.25□□□□□ -0.61
RABGGTA-218ENST00000560777 EEDO75530 441 aaKnown RBP11.25□□□□□ -0.61
RABGGTA-218ENST00000560777 SEMA3DO95025 777 aa11.25□□□□□ -0.61
RABGGTA-218ENST00000560777 UQCRHP07919 91 aa11.25□□□□□ -0.61
RABGGTA-218ENST00000560777 FGF4P08620 206 aa11.25□□□□□ -0.61
RABGGTA-218ENST00000560777 UROSP10746 265 aa11.25□□□□□ -0.61
RABGGTA-218ENST00000560777 HSD3B1P14060 373 aa11.25□□□□□ -0.61
RABGGTA-218ENST00000560777 HSD3B2P26439 372 aa11.25□□□□□ -0.61
RABGGTA-218ENST00000560777 SERPINB5P36952 375 aa11.25□□□□□ -0.61
RABGGTA-218ENST00000560777 SSR2P43308 183 aa11.25□□□□□ -0.61
RABGGTA-218ENST00000560777 RAB38P57729 211 aa11.25□□□□□ -0.61
RABGGTA-218ENST00000560777 BTG2P78543 158 aa11.25□□□□□ -0.61
RABGGTA-218ENST00000560777 TBL3Q12788 808 aaKnown RBP11.25□□□□□ -0.61
RABGGTA-218ENST00000560777 RCN2Q14257 317 aa11.25□□□□□ -0.61
RABGGTA-218ENST00000560777 CHI3L2Q15782 390 aa11.25□□□□□ -0.61
RABGGTA-218ENST00000560777 TUBB8Q3ZCM7 444 aa11.25□□□□□ -0.61
RABGGTA-218ENST00000560777 MFSD4BQ5TF39 518 aa11.25□□□□□ -0.61
RABGGTA-218ENST00000560777 CLEC6AQ6EIG7 209 aa11.25□□□□□ -0.61
RABGGTA-218ENST00000560777 FAAH2Q6GMR7 532 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms