RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 PTPRRQ15256 657 aa16.65■□□□□ 0.26
PTPN21-208ENST00000556564 FAM180BQ6P0A1 224 aa16.65■□□□□ 0.26
PTPN21-208ENST00000556564 SATL1Q86VE3 508 aa16.65■□□□□ 0.26
PTPN21-208ENST00000556564 DUSP23Q9BVJ7 150 aa16.65■□□□□ 0.26
PTPN21-208ENST00000556564 TMEM265A0A087WTH1 108 aa16.64■□□□□ 0.26
PTPN21-208ENST00000556564 A0A1W2PP18 115 aa16.64■□□□□ 0.26
PTPN21-208ENST00000556564 HHLA1C9JL84 531 aa16.64■□□□□ 0.26
PTPN21-208ENST00000556564 SYNGR4O95473 234 aa16.64■□□□□ 0.26
PTPN21-208ENST00000556564 ZNF888P0CJ79 500 aaPredicted RBP16.64■□□□□ 0.26
PTPN21-208ENST00000556564 MC1RQ01726 317 aa16.64■□□□□ 0.26
PTPN21-208ENST00000556564 ZFAND4Q86XD8 727 aa16.64■□□□□ 0.26
PTPN21-208ENST00000556564 OR2A12Q8NGT7 310 aa16.64■□□□□ 0.26
PTPN21-208ENST00000556564 MOAP1Q96BY2 351 aa16.64■□□□□ 0.26
PTPN21-208ENST00000556564 HSH2DQ96JZ2 352 aa16.64■□□□□ 0.26
PTPN21-208ENST00000556564 C8orf4Q9NR00 106 aa16.64■□□□□ 0.26
PTPN21-208ENST00000556564 RABL3Q5HYI8 236 aa16.64■□□□□ 0.25
PTPN21-208ENST00000556564 SHISA6Q6ZSJ9 500 aa16.64■□□□□ 0.25
PTPN21-208ENST00000556564 OR5P2Q8WZ92 322 aa16.64■□□□□ 0.25
PTPN21-208ENST00000556564 LRIT1Q9P2V4 623 aa16.64■□□□□ 0.25
PTPN21-208ENST00000556564 PAIP2BQ9ULR5 123 aaKnown RBP16.64■□□□□ 0.25
PTPN21-208ENST00000556564 VLDLRP98155 873 aa16.64■□□□□ 0.25
PTPN21-208ENST00000556564 NLGN4XQ8N0W4 816 aa16.64■□□□□ 0.25
PTPN21-208ENST00000556564 SETD6Q8TBK2 473 aa16.64■□□□□ 0.25
PTPN21-208ENST00000556564 WDR60Q8WVS4 1066 aa16.64■□□□□ 0.25
PTPN21-208ENST00000556564 RTP4Q96DX8 246 aa16.64■□□□□ 0.25
PTPN21-208ENST00000556564 G6PC3Q9BUM1 346 aa16.64■□□□□ 0.25
PTPN21-208ENST00000556564 PHF7Q9BWX1 381 aaPredicted RBP16.64■□□□□ 0.25
PTPN21-208ENST00000556564 OR51I1Q9H343 314 aa16.64■□□□□ 0.25
PTPN21-208ENST00000556564 SSC5DA1L4H1 1573 aa16.64■□□□□ 0.25
PTPN21-208ENST00000556564 MYH15Q9Y2K3 1946 aa16.64■□□□□ 0.25
PTPN21-208ENST00000556564 CITO14578 2027 aa16.64■□□□□ 0.25
PTPN21-208ENST00000556564 EIF1AYO14602 144 aaKnown RBP16.64■□□□□ 0.25
PTPN21-208ENST00000556564 HSD11B1P28845 292 aa16.64■□□□□ 0.25
PTPN21-208ENST00000556564 CAPGP40121 348 aa16.64■□□□□ 0.25
PTPN21-208ENST00000556564 TCTE1Q5JU00 501 aa16.64■□□□□ 0.25
PTPN21-208ENST00000556564 FUBP1Q96AE4 644 aaKnown RBP16.64■□□□□ 0.25
PTPN21-208ENST00000556564 ARRDC3Q96B67 414 aa16.64■□□□□ 0.25
PTPN21-208ENST00000556564 ELSPBP1Q96BH3 223 aa16.64■□□□□ 0.25
PTPN21-208ENST00000556564 MYRFLQ96LU7 910 aa16.64■□□□□ 0.25
PTPN21-208ENST00000556564 GPRC5BQ9NZH0 403 aa16.64■□□□□ 0.25
PTPN21-208ENST00000556564 COL5A3P25940 1745 aaPredicted RBP16.64■□□□□ 0.25
PTPN21-208ENST00000556564 E7ENX8 843 aa16.64■□□□□ 0.25
PTPN21-208ENST00000556564 CH25HO95992 272 aa16.64■□□□□ 0.25
PTPN21-208ENST00000556564 HBQ1P09105 142 aa16.64■□□□□ 0.25
PTPN21-208ENST00000556564 CCNOP22674 350 aa16.64■□□□□ 0.25
PTPN21-208ENST00000556564 PEX2P28328 305 aa16.64■□□□□ 0.25
PTPN21-208ENST00000556564 CTSCP53634 463 aa16.64■□□□□ 0.25
PTPN21-208ENST00000556564 PPP3R1P63098 170 aa16.64■□□□□ 0.25
PTPN21-208ENST00000556564 NFATC4Q14934 902 aa16.64■□□□□ 0.25
PTPN21-208ENST00000556564 LACTB2Q53H82 288 aaPredicted RBP16.64■□□□□ 0.25
PTPN21-208ENST00000556564 COQ10BQ9H8M1 238 aa16.64■□□□□ 0.25
PTPN21-208ENST00000556564 ZBTB20Q9HC78 741 aaPredicted RBP16.64■□□□□ 0.25
PTPN21-208ENST00000556564 CTBSQ01459 385 aa16.63■□□□□ 0.25
PTPN21-208ENST00000556564 ACY1Q03154 408 aa16.63■□□□□ 0.25
PTPN21-208ENST00000556564 TRAP1Q12931 704 aaKnown RBP16.63■□□□□ 0.25
PTPN21-208ENST00000556564 CBARPQ8N350 705 aaPredicted RBP16.63■□□□□ 0.25
PTPN21-208ENST00000556564 AMER2Q8N7J2 671 aa16.63■□□□□ 0.25
PTPN21-208ENST00000556564 SLC12A9Q9BXP2 914 aa16.63■□□□□ 0.25
PTPN21-208ENST00000556564 A0A075B6Q4 140 aa16.63■□□□□ 0.25
PTPN21-208ENST00000556564 A0A0J9YY10 115 aa16.63■□□□□ 0.25
PTPN21-208ENST00000556564 PGRMC2O15173 223 aa16.63■□□□□ 0.25
PTPN21-208ENST00000556564 CSNK1DP48730 415 aa16.63■□□□□ 0.25
PTPN21-208ENST00000556564 PPP1R8Q12972 351 aaKnown RBP16.63■□□□□ 0.25
PTPN21-208ENST00000556564 TMEM35AQ53FP2 167 aa16.63■□□□□ 0.25
PTPN21-208ENST00000556564 MCUBQ9NWR8 336 aa16.63■□□□□ 0.25
PTPN21-208ENST00000556564 TAAR2Q9P1P5 351 aa16.63■□□□□ 0.25
PTPN21-208ENST00000556564 ZCWPW2A0A1B0GU75 182 aa16.63■□□□□ 0.25
PTPN21-208ENST00000556564 AHSA1O95433 338 aa16.63■□□□□ 0.25
PTPN21-208ENST00000556564 NUDT1P36639 197 aa16.63■□□□□ 0.25
PTPN21-208ENST00000556564 HSDL2Q6YN16 418 aa16.63■□□□□ 0.25
PTPN21-208ENST00000556564 GALNT12Q8IXK2 581 aa16.63■□□□□ 0.25
PTPN21-208ENST00000556564 CD200R1Q8TD46 325 aa16.63■□□□□ 0.25
PTPN21-208ENST00000556564 TPK1Q9H3S4 243 aa16.63■□□□□ 0.25
PTPN21-208ENST00000556564 RIMKLBQ9ULI2 386 aa16.63■□□□□ 0.25
PTPN21-208ENST00000556564 SLC9B1P1A6NJY1 282 aa16.63■□□□□ 0.25
PTPN21-208ENST00000556564 KLF11O14901 512 aa16.63■□□□□ 0.25
PTPN21-208ENST00000556564 CHRM5P08912 532 aaPredicted RBP16.63■□□□□ 0.25
PTPN21-208ENST00000556564 GSK3BP49841 420 aa16.63■□□□□ 0.25
PTPN21-208ENST00000556564 ZNF140P52738 457 aaPredicted RBP16.63■□□□□ 0.25
PTPN21-208ENST00000556564 SLC18A1P54219 525 aa16.63■□□□□ 0.25
PTPN21-208ENST00000556564 ZNF630Q2M218 657 aaPredicted RBP16.63■□□□□ 0.25
PTPN21-208ENST00000556564 DCP2Q8IU60 420 aaKnown RBP16.63■□□□□ 0.25
PTPN21-208ENST00000556564 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.63■□□□□ 0.25
PTPN21-208ENST00000556564 LINC01599Q8WXQ3 324 aa16.63■□□□□ 0.25
PTPN21-208ENST00000556564 IGSF5Q9NSI5 407 aa16.63■□□□□ 0.25
PTPN21-208ENST00000556564 DAPL1A0PJW8 107 aa16.63■□□□□ 0.25
PTPN21-208ENST00000556564 PLD2O14939 933 aa16.63■□□□□ 0.25
PTPN21-208ENST00000556564 POLR1CO15160 346 aaPredicted RBP16.63■□□□□ 0.25
PTPN21-208ENST00000556564 RNF13O43567 381 aa16.63■□□□□ 0.25
PTPN21-208ENST00000556564 CREG1O75629 220 aa16.63■□□□□ 0.25
PTPN21-208ENST00000556564 CLUP10909 449 aa16.63■□□□□ 0.25
PTPN21-208ENST00000556564 PORP16435 677 aaPredicted RBP16.63■□□□□ 0.25
PTPN21-208ENST00000556564 RPS3P23396 243 aaKnown RBP eCLIP16.63■□□□□ 0.25
PTPN21-208ENST00000556564 OR1E2P47887 323 aa16.63■□□□□ 0.25
PTPN21-208ENST00000556564 FGL2Q14314 439 aa16.63■□□□□ 0.25
PTPN21-208ENST00000556564 PRPF38BQ5VTL8 546 aaKnown RBP16.63■□□□□ 0.25
PTPN21-208ENST00000556564 OR6N1Q8NGY5 312 aa16.63■□□□□ 0.25
PTPN21-208ENST00000556564 AP3S1Q92572 193 aa16.63■□□□□ 0.25
PTPN21-208ENST00000556564 RREB1Q92766 1687 aa16.63■□□□□ 0.25
PTPN21-208ENST00000556564 SGK494L7N484 410 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 234.5 ms