RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 SRFBP1Q8NEF9 429 aaKnown RBP10.4□□□□□ -0.74
DDB1-222ENST00000543627 ARMC2Q8NEN0 867 aa10.4□□□□□ -0.74
DDB1-222ENST00000543627 OR4F6Q8NGB9 312 aa10.4□□□□□ -0.74
DDB1-222ENST00000543627 ACMSDQ8TDX5 336 aa10.4□□□□□ -0.74
DDB1-222ENST00000543627 TM9SF4Q92544 642 aa10.4□□□□□ -0.74
DDB1-222ENST00000543627 KCNC2Q96PR1 638 aa10.4□□□□□ -0.74
DDB1-222ENST00000543627 OR1F2PQ96R84 312 aa10.4□□□□□ -0.74
DDB1-222ENST00000543627 SERINC2Q96SA4 455 aa10.4□□□□□ -0.74
DDB1-222ENST00000543627 MS4A8Q9BY19 250 aa10.4□□□□□ -0.74
DDB1-222ENST00000543627 ILKAPQ9H0C8 392 aaPredicted RBP10.4□□□□□ -0.74
DDB1-222ENST00000543627 ZNF700Q9H0M5 742 aa10.4□□□□□ -0.74
DDB1-222ENST00000543627 EPN3Q9H201 632 aa10.4□□□□□ -0.74
DDB1-222ENST00000543627 C12orf65Q9H3J6 166 aaKnown RBP10.4□□□□□ -0.74
DDB1-222ENST00000543627 EPS8L2Q9H6S3 715 aa10.4□□□□□ -0.74
DDB1-222ENST00000543627 KCNK13Q9HB14 408 aa10.4□□□□□ -0.74
DDB1-222ENST00000543627 PRTFDC1Q9NRG1 225 aa10.4□□□□□ -0.74
DDB1-222ENST00000543627 LANCL2Q9NS86 450 aa10.4□□□□□ -0.74
DDB1-222ENST00000543627 PLA2G3Q9NZ20 509 aa10.4□□□□□ -0.74
DDB1-222ENST00000543627 FETUBQ9UGM5 382 aa10.4□□□□□ -0.74
DDB1-222ENST00000543627 ANAPC2Q9UJX6 822 aa10.4□□□□□ -0.74
DDB1-222ENST00000543627 PCTPQ9UKL6 214 aa10.4□□□□□ -0.74
DDB1-222ENST00000543627 J3QKU1 62 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 CLDN4O14493 209 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 CDH16O75309 829 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 GLRA3O75311 464 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 OR4F21O95013 312 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 TBX6O95947 436 aaPredicted RBP10.39□□□□□ -0.75
DDB1-222ENST00000543627 GBAP04062 536 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 IFNA16P05015 189 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 GSTA1P08263 222 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 PRR35P0CG20 571 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 MYL2P10916 166 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 ICAM2P13598 275 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 TNNI3P19429 210 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 CPN2P22792 545 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 ATP5F1P24539 256 aaPredicted RBP10.39□□□□□ -0.75
DDB1-222ENST00000543627 PTX3P26022 381 aaPredicted RBP10.39□□□□□ -0.75
DDB1-222ENST00000543627 CD97P48960 835 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 LIM2P55344 173 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 RAB38P57729 211 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 ARG2P78540 354 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 ID2Q02363 134 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 CLCQ05315 142 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 TMEM35AQ53FP2 167 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 DEPDC1Q5TB30 811 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 KHDRBS2Q5VWX1 349 aaKnown RBP10.39□□□□□ -0.75
DDB1-222ENST00000543627 OR4C11Q6IEV9 310 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 UBE3DQ7Z6J8 389 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 RBMXL3Q8N7X1 1067 aaKnown RBP10.39□□□□□ -0.75
DDB1-222ENST00000543627 ACOT4Q8N9L9 421 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 DNAJB14Q8TBM8 379 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 MZB1Q8WU39 189 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 RGMAQ96B86 450 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 SEC16BQ96JE7 1060 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 CSF3RQ99062 836 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 LPAR4Q99677 370 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 SMAD5Q99717 465 aaKnown RBP10.39□□□□□ -0.75
DDB1-222ENST00000543627 MAPKAP1Q9BPZ7 522 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 TBCDQ9BTW9 1192 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 TUBB6Q9BUF5 446 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 ROGDIQ9GZN7 287 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 IQCGQ9H095 443 aaKnown RBP10.39□□□□□ -0.75
DDB1-222ENST00000543627 CENPHQ9H3R5 247 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 ELOVL6Q9H5J4 265 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 ZBTB26Q9HCK0 441 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 MLXIPLQ9NP71 852 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 DMRT3Q9NQL9 472 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 NECTIN3Q9NQS3 549 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 PRDM9Q9NQV7 894 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 PRDM7Q9NQW5 492 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 COPG2Q9UBF2 871 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 ADGRE2Q9UHX3 823 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 GRID1Q9ULK0 1009 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 PLAAQ9Y263 795 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 MRPS33Q9Y291 106 aaKnown RBP10.39□□□□□ -0.75
DDB1-222ENST00000543627 SPACA6W5XKT8 324 aa10.39□□□□□ -0.75
DDB1-222ENST00000543627 LOC102723996A0A087X1L8 192 aa10.38□□□□□ -0.75
DDB1-222ENST00000543627 ARHGAP10A1A4S6 786 aa10.38□□□□□ -0.75
DDB1-222ENST00000543627 H0YIV9 168 aa10.38□□□□□ -0.75
DDB1-222ENST00000543627 UGDHO60701 494 aa10.38□□□□□ -0.75
DDB1-222ENST00000543627 SPAG7O75391 227 aa10.38□□□□□ -0.75
DDB1-222ENST00000543627 OTCP00480 354 aa10.38□□□□□ -0.75
DDB1-222ENST00000543627 SERPINA7P05543 415 aa10.38□□□□□ -0.75
DDB1-222ENST00000543627 ATP5A1P25705 553 aaKnown RBP10.38□□□□□ -0.75
DDB1-222ENST00000543627 HMOX2P30519 316 aa10.38□□□□□ -0.75
DDB1-222ENST00000543627 SERPINB1P30740 379 aa10.38□□□□□ -0.75
DDB1-222ENST00000543627 CASRP41180 1078 aa10.38□□□□□ -0.75
DDB1-222ENST00000543627 HNRNPFP52597 415 aaKnown RBP10.38□□□□□ -0.75
DDB1-222ENST00000543627 ZNF33BQ06732 778 aa10.38□□□□□ -0.75
DDB1-222ENST00000543627 STX4Q12846 297 aa10.38□□□□□ -0.75
DDB1-222ENST00000543627 RCN2Q14257 317 aa10.38□□□□□ -0.75
DDB1-222ENST00000543627 PLEKHN1Q494U1 663 aaPredicted RBP10.38□□□□□ -0.75
DDB1-222ENST00000543627 UNC50Q53HI1 259 aa10.38□□□□□ -0.75
DDB1-222ENST00000543627 CFAP157Q5JU67 520 aa10.38□□□□□ -0.75
DDB1-222ENST00000543627 ZNF678Q5SXM1 525 aa10.38□□□□□ -0.75
DDB1-222ENST00000543627 JMJD6Q6NYC1 403 aaPredicted RBP10.38□□□□□ -0.75
DDB1-222ENST00000543627 WDR93Q6P2C0 686 aa10.38□□□□□ -0.75
DDB1-222ENST00000543627 EMBQ6PCB8 327 aa10.38□□□□□ -0.75
DDB1-222ENST00000543627 CYP20A1Q6UW02 462 aa10.38□□□□□ -0.75
DDB1-222ENST00000543627 ISLR2Q6UXK2 745 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms