RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 RNF150Q9ULK6 438 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 PSG11Q9UQ72 335 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 RNF24Q9Y225 148 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 CA5BQ9Y2D0 317 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 CRYL1Q9Y2S2 319 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 COMMD10Q9Y6G5 202 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 RPS6KL1Q9Y6S9 549 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 COLEC10Q9Y6Z7 277 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 COL5A1P20908 1838 aaPredicted RBP0.36□□□□□ -2.35
COPB1-212ENST00000534771 KMT2DO14686 5537 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 CFAP65Q6ZU64 1925 aaKnown RBP0.35□□□□□ -2.35
COPB1-212ENST00000534771 OTOGLQ3ZCN5 2332 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 LOC100509620A0A075B734 347 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 LOC102723996A0A087X1L8 192 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 TMEM150BA6NC51 233 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 EFCAB7A8K855 629 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 A8MX80 341 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 B4DLN1 442 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 NEDD8-MDP1E9PL57 170 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 ADAMDEC1O15204 470 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 KIF5CO60282 957 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 ICOSLGO75144 302 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 UFL1O94874 794 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 GJB5O95377 273 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 ANGPTL1O95841 491 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 GSRP00390 522 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 PDGFBP01127 241 aaPredicted RBP0.35□□□□□ -2.35
COPB1-212ENST00000534771 MT-ND2P03891 347 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 SERPING1P05155 500 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 CSN3P07498 182 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 LINGO3P0C6S8 592 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 SLC35E2P0CK97 266 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 CD59P13987 128 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 HSD17B1P14061 328 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 EPCAMP16422 314 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 UGT1A6P19224 532 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 TBPP20226 339 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 DUTP33316 252 aaKnown RBP0.35□□□□□ -2.35
COPB1-212ENST00000534771 NT5C2P49902 561 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 MRPL12P52815 198 aaKnown RBP0.35□□□□□ -2.35
COPB1-212ENST00000534771 DIO3P55073 304 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 CLDN17P56750 224 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 EVCP57679 992 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 RHBDL3P58872 404 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 CD47Q08722 323 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 GRB14Q14449 540 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 IRF3Q14653 427 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 RASA2Q15283 850 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 SNAPC1Q16533 368 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 LY6EQ16553 131 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 RBBP7Q16576 425 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 KYAT1Q16773 422 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 CCDC14Q49A88 953 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 CBWD6Q4V339 395 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 RAB41Q5JT25 222 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 CBWD3Q5JTY5 395 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 TATDN1Q6P1N9 297 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 ADAMTSL2Q86TH1 951 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 ZNF677Q86XU0 584 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 ARL14Q8N4G2 192 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 RNF182Q8N6D2 247 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 Q8N9G6 341 aaPredicted RBP0.35□□□□□ -2.35
COPB1-212ENST00000534771 CCDC63Q8NA47 563 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 OR10S1Q8NGN2 331 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 MARCH1Q8TCQ1 289 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 LPGAT1Q92604 370 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 PCDHB18PQ96TA0 734 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 KIR2DL4Q99706 377 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 GPR88Q9GZN0 384 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 GLT8D2Q9H1C3 349 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 NT5DC2Q9H857 520 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 NMUR1Q9HB89 426 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 AMBNQ9NP70 447 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 ABCC13Q9NSE7 274 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 SEPT11Q9NVA2 429 aaKnown RBP0.35□□□□□ -2.35
COPB1-212ENST00000534771 PRMT7Q9NVM4 692 aaPredicted RBP0.35□□□□□ -2.35
COPB1-212ENST00000534771 IRAK4Q9NWZ3 460 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 SPG21Q9NZD8 308 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 PDP2Q9P2J9 529 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 DBF4Q9UBU7 674 aaPredicted RBP0.35□□□□□ -2.35
COPB1-212ENST00000534771 UBQLN2Q9UHD9 624 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 SLC24A2Q9UI40 661 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 CCPG1Q9ULG6 757 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 LTBP1Q14766 1721 aa0.35□□□□□ -2.35
COPB1-212ENST00000534771 IGLV8-61A0A075B6I0 122 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 C17orf105B2RV13 164 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 PTGES3LE9PB15 166 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 CTDSP2O14595 271 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 AP3D1O14617 1153 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 RTN2O75298 545 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 MED6O75586 246 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 PENKP01210 267 aaPredicted RBP0.34□□□□□ -2.36
COPB1-212ENST00000534771 IGHG3P01860 377 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 OR9G9P0C7N8 305 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 P4HA1P13674 534 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 OAS2P29728 719 aaKnown RBP0.34□□□□□ -2.36
COPB1-212ENST00000534771 PPP2R1BP30154 601 aa0.34□□□□□ -2.36
COPB1-212ENST00000534771 GARSP41250 739 aaKnown RBP0.34□□□□□ -2.36
COPB1-212ENST00000534771 RPS8P62241 208 aaKnown RBP0.34□□□□□ -2.36
COPB1-212ENST00000534771 SETQ01105 290 aaPredicted RBP0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms