RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 UBLCP1Q8WVY7 318 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 COQ8BQ96D53 544 aa4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 MTBPQ96DY7 904 aa4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 FAM81BQ96LP2 452 aa4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 APOLD1Q96LR9 279 aa4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 AK8Q96MA6 479 aa4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 NLRP4Q96MN2 994 aa4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 GPR174Q9BXC1 333 aa4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 KRTAP17-1Q9BYP8 105 aa4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 SLC5A7Q9GZV3 580 aa4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 ABCG4Q9H172 646 aa4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 SEPT10Q9P0V9 454 aa4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 HOOK1Q9UJC3 728 aaKnown RBP4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 ITM2BQ9Y287 266 aa4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 HS3ST3A1Q9Y663 406 aa4.44□□□□□ -1.7
HMGB1P23-201ENST00000518743 RP1P56715 2156 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 SHANK1Q9Y566 2161 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 C13orf42A0A1B0GVH6 325 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 A0A1W2PPM1 405 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 RPS10-NUDT3A0A1W2PQS6 291 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 A0A1W2PRV1 198 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 ANTXRLA6NF34 631 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 CASTOR2A6NHX0 329 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 EFCAB7A8K855 629 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 K7EQS6 105 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 MEIS2O14770 477 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 TIMM23O14925 209 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 TO15178 435 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 MATN3O15232 486 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 GRID2O43424 1007 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 XRCC3O43542 346 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 SPRY3O43610 288 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 NDUFS7O75251 213 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 CRCPO75575 148 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 RAD51DO75771 328 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 TNFSF15O95150 251 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 CKMT2P17540 419 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 GABRG2P18507 467 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 C21orf33P30042 268 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 GABRA5P31644 462 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 GDF5P43026 501 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 IFNAR2P48551 515 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 SLC26A2P50443 739 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 GPC3P51654 580 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 C21orf59P57076 290 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 PROK1P58294 105 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 KIAA1024LP59773 190 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 DLK1P80370 383 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 PDE1BQ01064 536 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 EEF1A2Q05639 463 aaKnown RBP4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 ELAVL2Q12926 359 aaKnown RBP4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 LAMB3Q13751 1172 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 PDGFRLQ15198 375 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 EFNB3Q15768 340 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 TAZQ16635 292 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 KLHL26Q53HC5 615 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 LCE5AQ5TCM9 118 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 ALS2CLQ60I27 953 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 ETFRF1Q6IPR1 90 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 MFSD12Q6NUT3 480 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 PLEKHM3Q6ZWE6 761 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 YTHDF3Q7Z739 585 aaKnown RBP4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 EXOC3L1Q86VI1 746 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 TEX9Q8N6V9 391 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 OR14A16Q8NHC5 309 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 C16orf52Q8NHV5 167 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 OIT3Q8WWZ8 545 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 IGFBPL1Q8WX77 278 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 RAD54LQ92698 747 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 SNX21Q969T3 373 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 PDLIM5Q96HC4 596 aaKnown RBP4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 TXNDC15Q96J42 360 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 CPNE1Q99829 537 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 SPXQ9BT56 116 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 KATNB1Q9BVA0 655 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 ZNF350Q9GZX5 532 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 TNMDQ9H2S6 317 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 ECT2Q9H8V3 914 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 PLAC1Q9HBJ0 212 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 HIF1ANQ9NWT6 349 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 FBXL5Q9UKA1 691 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 AMDHD2Q9Y303 409 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 YIPF1Q9Y548 306 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 DMRT1Q9Y5R6 373 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 COX11Q9Y6N1 276 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 CROCCQ5TZA2 2017 aa4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.43□□□□□ -1.7
HMGB1P23-201ENST00000518743 IGLV5-39A0A0G2JS06 123 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 TMEM272A0A1B0GTI8 110 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 ELOVL7A1L3X0 281 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 KCNU1A8MYU2 1149 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 EIF3DO15371 548 aaKnown RBP eCLIP4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 MAGEB2O15479 319 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 KCNAB3O43448 404 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 SERPINI2O75830 405 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 SEC24AO95486 1093 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 TMEM191BP0C7N4 346 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 C8orf89P0DMQ9 161 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 SPP1P10451 314 aa4.42□□□□□ -1.7
HMGB1P23-201ENST00000518743 P4HA1P13674 534 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms