RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 A8MXE2 369 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 RPS3AP61247 264 aaKnown RBP11.67□□□□□ -0.54
PCF11-201ENST00000298281 SH3PXD2AQ5TCZ1 1133 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 TMEM110Q86TL2 294 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 METTL27Q8N6F8 245 aaPredicted RBP11.67□□□□□ -0.54
PCF11-201ENST00000298281 KCNN1Q92952 543 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 HHATLQ9HCP6 504 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 PLEKHM1Q9Y4G2 1056 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 PCDHGB6Q9Y5F9 930 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 MAFBQ9Y5Q3 323 aaPredicted RBP11.67□□□□□ -0.54
PCF11-201ENST00000298281 RNF215Q9Y6U7 377 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 AQP12BA6NM10 295 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 ENSAO43768 121 aaKnown RBP11.67□□□□□ -0.54
PCF11-201ENST00000298281 RP2O75695 350 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 MYCLP1P12525 358 aaPredicted RBP11.67□□□□□ -0.54
PCF11-201ENST00000298281 BMP6P22004 513 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 HSD11B2P80365 405 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 RPA4Q13156 261 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 IL17AQ16552 155 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 C6orf52Q5T4I8 152 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 OR52W1Q6IF63 320 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 AQP12AQ8IXF9 295 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 TMEM203Q969S6 136 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 ECHDC3Q96DC8 303 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 POLR2J2Q9GZM3 115 aaKnown RBP11.67□□□□□ -0.54
PCF11-201ENST00000298281 GOLGA2P5Q9HBQ8 144 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 FAM118AQ9NWS6 357 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 EIF2B4Q9UI10 523 aaKnown RBP11.67□□□□□ -0.54
PCF11-201ENST00000298281 ACAD8Q9UKU7 415 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 ATG12O94817 140 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 STATHP02808 62 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 TOMM5Q8N4H5 51 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 NLGN2Q8NFZ4 835 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 CHPT1Q8WUD6 406 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 BARD1Q99728 777 aaKnown RBP11.67□□□□□ -0.54
PCF11-201ENST00000298281 TLR6Q9Y2C9 796 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 A0A1W2PRB8 838 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 C2CD4BA6NLJ0 364 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 SLC22A1O15245 554 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 PCDH7O60245 1069 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 RCBTB2O95199 551 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 C8AP07357 584 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 FAM163BP0C2L3 166 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 FABP6P51161 128 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 NCS1P62166 190 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 ZNF616Q08AN1 781 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 HERC3Q15034 1050 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 BRAT1Q6PJG6 821 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 PAOXQ6QHF9 649 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 ARL14Q8N4G2 192 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 LRRN4Q8WUT4 740 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 GEMIN6Q8WXD5 167 aaKnown RBP11.67□□□□□ -0.54
PCF11-201ENST00000298281 TMEM74Q96NL1 305 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 GATA5Q9BWX5 397 aaPredicted RBP11.67□□□□□ -0.54
PCF11-201ENST00000298281 TMED5Q9Y3A6 229 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 SLC38A8A6NNN8 435 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 ACOT7O00154 380 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 ATE1O95260 518 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 BMP8BP34820 402 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 ACTR1BP42025 376 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 SLC14A2Q15849 920 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 BMP8AQ7Z5Y6 402 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 TPRA1Q86W33 373 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 CNOT9Q92600 299 aaKnown RBP11.67□□□□□ -0.54
PCF11-201ENST00000298281 PURBQ96QR8 312 aaKnown RBP11.67□□□□□ -0.54
PCF11-201ENST00000298281 SPATA6Q9NWH7 488 aaPredicted RBP11.67□□□□□ -0.54
PCF11-201ENST00000298281 FLRT1Q9NZU1 646 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 FZD10Q9ULW2 581 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 UBE2J1Q9Y385 318 aaPredicted RBP11.67□□□□□ -0.54
PCF11-201ENST00000298281 RHDQ02161 417 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 NIPAL1Q6NVV3 410 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 LRRN1Q6UXK5 716 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 UBQLNLQ8IYU4 475 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 KREMEN2Q8NCW0 462 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 SHKBP1Q8TBC3 707 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 NTAN1Q96AB6 310 aa11.67□□□□□ -0.54
PCF11-201ENST00000298281 AGAP5A6NIR3 686 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 MT-ND1P03886 318 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 RALGPS1Q5JS13 557 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 TAC4Q86UU9 113 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 KCTD7Q96MP8 289 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 OR14A2Q96R54 314 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 I3L521 148 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 SHOX2O60902 331 aaPredicted RBP11.66□□□□□ -0.54
PCF11-201ENST00000298281 SCAF4O95104 1147 aaKnown RBP11.66□□□□□ -0.54
PCF11-201ENST00000298281 FHP07954 510 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 RBMXP38159 391 aaKnown RBP11.66□□□□□ -0.54
PCF11-201ENST00000298281 S100A7AQ86SG5 101 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 RAB9BQ9NP90 201 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 ZCCHC3Q9NUD5 404 aaKnown RBP11.66□□□□□ -0.54
PCF11-201ENST00000298281 VPS29Q9UBQ0 182 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 IL36AQ9UHA7 158 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 AFDNP55196 1824 aaKnown RBP11.66□□□□□ -0.54
PCF11-201ENST00000298281 HERVK_113P63132 956 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 TUBA4AP68366 448 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 NFATC4Q14934 902 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 PLEKHN1Q494U1 663 aaPredicted RBP11.66□□□□□ -0.54
PCF11-201ENST00000298281 PAN3Q58A45 887 aaKnown RBP11.66□□□□□ -0.54
PCF11-201ENST00000298281 PPM1JQ5JR12 505 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 NUS1Q96E22 293 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms