RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 TSTQ16762 297 aaKnown RBP16.07■□□□□ 0.16
PHRF1-201ENST00000264555 ELOA3BQ3SY89 546 aa16.07■□□□□ 0.16
PHRF1-201ENST00000264555 ADNP2Q6IQ32 1131 aa16.07■□□□□ 0.16
PHRF1-201ENST00000264555 ELOA3Q8NG57 546 aa16.07■□□□□ 0.16
PHRF1-201ENST00000264555 TAMM41Q96BW9 452 aa16.07■□□□□ 0.16
PHRF1-201ENST00000264555 WDR45Q9Y484 360 aa16.07■□□□□ 0.16
PHRF1-201ENST00000264555 CLCA3PQ9Y6N3 262 aa16.07■□□□□ 0.16
PHRF1-201ENST00000264555 ZNF3P17036 446 aa16.07■□□□□ 0.16
PHRF1-201ENST00000264555 ACADLP28330 430 aa16.07■□□□□ 0.16
PHRF1-201ENST00000264555 TRAM2Q15035 370 aa16.07■□□□□ 0.16
PHRF1-201ENST00000264555 CTSL3PQ5NE16 218 aa16.07■□□□□ 0.16
PHRF1-201ENST00000264555 OR4K14Q8NGD5 310 aa16.07■□□□□ 0.16
PHRF1-201ENST00000264555 OR52E4Q8NGH9 312 aa16.07■□□□□ 0.16
PHRF1-201ENST00000264555 GRHL3Q8TE85 626 aa16.07■□□□□ 0.16
PHRF1-201ENST00000264555 TNFRSF10DQ9UBN6 386 aa16.07■□□□□ 0.16
PHRF1-201ENST00000264555 RNF6Q9Y252 685 aa16.07■□□□□ 0.16
PHRF1-201ENST00000264555 FAM92AA1XBS5 289 aa16.07■□□□□ 0.16
PHRF1-201ENST00000264555 RNGTTO60942 597 aaKnown RBP16.07■□□□□ 0.16
PHRF1-201ENST00000264555 SERPINA3P01011 423 aa16.07■□□□□ 0.16
PHRF1-201ENST00000264555 RPA4Q13156 261 aa16.07■□□□□ 0.16
PHRF1-201ENST00000264555 CST6Q15828 149 aa16.07■□□□□ 0.16
PHRF1-201ENST00000264555 FBXO46Q6PJ61 603 aaPredicted RBP16.07■□□□□ 0.16
PHRF1-201ENST00000264555 RTL10Q7L3V2 364 aa16.07■□□□□ 0.16
PHRF1-201ENST00000264555 CARM1Q86X55 608 aa16.07■□□□□ 0.16
PHRF1-201ENST00000264555 CCDC116Q8IYX3 515 aa16.07■□□□□ 0.16
PHRF1-201ENST00000264555 TMEM80Q96HE8 168 aa16.07■□□□□ 0.16
PHRF1-201ENST00000264555 Q9N2J8 555 aa16.07■□□□□ 0.16
PHRF1-201ENST00000264555 IGLV3-10A0A075B6K4 115 aa16.07■□□□□ 0.16
PHRF1-201ENST00000264555 RETP07949 1114 aa16.07■□□□□ 0.16
PHRF1-201ENST00000264555 C5AR1P21730 350 aa16.07■□□□□ 0.16
PHRF1-201ENST00000264555 TMEM35AQ53FP2 167 aa16.07■□□□□ 0.16
PHRF1-201ENST00000264555 PRSS58Q8IYP2 241 aa16.07■□□□□ 0.16
PHRF1-201ENST00000264555 WDR92Q96MX6 357 aa16.07■□□□□ 0.16
PHRF1-201ENST00000264555 TAPBPLQ9BX59 468 aa16.07■□□□□ 0.16
PHRF1-201ENST00000264555 BRF2Q9HAW0 419 aa16.07■□□□□ 0.16
PHRF1-201ENST00000264555 TMEM138Q9NPI0 162 aa16.07■□□□□ 0.16
PHRF1-201ENST00000264555 HCFC1R1Q9NWW0 138 aa16.07■□□□□ 0.16
PHRF1-201ENST00000264555 ARNTLO00327 626 aa16.06■□□□□ 0.16
PHRF1-201ENST00000264555 NPC1O15118 1278 aa16.06■□□□□ 0.16
PHRF1-201ENST00000264555 MUSKO15146 869 aa16.06■□□□□ 0.16
PHRF1-201ENST00000264555 GIMD1P0DJR0 217 aa16.06■□□□□ 0.16
PHRF1-201ENST00000264555 ALPPL2P10696 532 aa16.06■□□□□ 0.16
PHRF1-201ENST00000264555 LAMP1P11279 417 aa16.06■□□□□ 0.16
PHRF1-201ENST00000264555 DRD2P14416 443 aa16.06■□□□□ 0.16
PHRF1-201ENST00000264555 RPP38P78345 283 aaKnown RBP16.06■□□□□ 0.16
PHRF1-201ENST00000264555 NFE2L1Q14494 772 aa16.06■□□□□ 0.16
PHRF1-201ENST00000264555 PRPF38BQ5VTL8 546 aaKnown RBP16.06■□□□□ 0.16
PHRF1-201ENST00000264555 CNIH3Q8TBE1 160 aa16.06■□□□□ 0.16
PHRF1-201ENST00000264555 PPP1R14BQ96C90 147 aa16.06■□□□□ 0.16
PHRF1-201ENST00000264555 EHD1Q9H4M9 534 aa16.06■□□□□ 0.16
PHRF1-201ENST00000264555 CWH43Q9H720 699 aa16.06■□□□□ 0.16
PHRF1-201ENST00000264555 MARCH5Q9NX47 278 aa16.06■□□□□ 0.16
PHRF1-201ENST00000264555 ZNF221Q9UK13 617 aa16.06■□□□□ 0.16
PHRF1-201ENST00000264555 GNB5O14775 395 aa16.06■□□□□ 0.16
PHRF1-201ENST00000264555 OR12D1P0DN82 309 aa16.06■□□□□ 0.16
PHRF1-201ENST00000264555 ZNF829Q3KNS6 432 aaPredicted RBP16.06■□□□□ 0.16
PHRF1-201ENST00000264555 LIN54Q6MZP7 749 aa16.06■□□□□ 0.16
PHRF1-201ENST00000264555 CLECL1Q8IZS7 167 aa16.06■□□□□ 0.16
PHRF1-201ENST00000264555 NLGN3Q9NZ94 848 aa16.06■□□□□ 0.16
PHRF1-201ENST00000264555 XPNPEP2O43895 674 aa16.06■□□□□ 0.16
PHRF1-201ENST00000264555 POLR2CP19387 275 aaPredicted RBP16.06■□□□□ 0.16
PHRF1-201ENST00000264555 MNDAP41218 407 aa16.06■□□□□ 0.16
PHRF1-201ENST00000264555 DPPA4Q7L190 304 aa16.06■□□□□ 0.16
PHRF1-201ENST00000264555 HEBP1Q9NRV9 189 aa16.06■□□□□ 0.16
PHRF1-201ENST00000264555 ENPP2Q13822 863 aa16.06■□□□□ 0.16
PHRF1-201ENST00000264555 CYP27C1Q4G0S4 372 aa16.06■□□□□ 0.16
PHRF1-201ENST00000264555 LSMEM2Q8N112 164 aa16.06■□□□□ 0.16
PHRF1-201ENST00000264555 DTWD1Q8N5C7 304 aa16.06■□□□□ 0.16
PHRF1-201ENST00000264555 TSEN15Q8WW01 171 aaKnown RBP16.06■□□□□ 0.16
PHRF1-201ENST00000264555 HHIPL1Q96JK4 782 aa16.06■□□□□ 0.16
PHRF1-201ENST00000264555 SMIM14Q96QK8 99 aa16.06■□□□□ 0.16
PHRF1-201ENST00000264555 TSSK6Q9BXA6 273 aa16.06■□□□□ 0.16
PHRF1-201ENST00000264555 C1QTNF1Q9BXJ1 281 aa16.06■□□□□ 0.16
PHRF1-201ENST00000264555 C1orf226A1L170 272 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 FAAHO00519 579 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 SLAMF1Q13291 335 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 CTC1Q2NKJ3 1217 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 ASPGQ86U10 573 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 PPP1R14AQ96A00 147 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 CD180Q99467 661 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 ZNF334Q9HCZ1 680 aaPredicted RBP16.05■□□□□ 0.16
PHRF1-201ENST00000264555 IFT52Q9Y366 437 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 HSPE1-MOB4S4R3N1 261 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 GM2AP17900 193 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 EXOC3L2Q2M3D2 409 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 COMMD6Q7Z4G1 85 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 HSD11B1LQ7Z5J1 315 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 ANKRD60Q9BZ19 345 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 PNO1Q9NRX1 252 aaKnown RBP16.05■□□□□ 0.16
PHRF1-201ENST00000264555 COMMD3Q9UBI1 195 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 PRSS21Q9Y6M0 314 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 COL24A1Q17RW2 1714 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 NUAK1O60285 661 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 KCNJ13O60928 360 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 KRT33AO76009 404 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 EPCAMP16422 314 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 BMP8BP34820 402 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 AMZ1Q400G9 498 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 MEDAGQ5VYS4 303 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 KLHL24Q6TFL4 600 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms