RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 ITPR1Q14643 2758 aa11.29□□□□□ -0.6
RABGGTA-218ENST00000560777 GOLGA6L10A6NI86 522 aa11.29□□□□□ -0.6
RABGGTA-218ENST00000560777 SAP18O00422 153 aaKnown RBP11.29□□□□□ -0.6
RABGGTA-218ENST00000560777 JRKO75564 520 aa11.29□□□□□ -0.6
RABGGTA-218ENST00000560777 ESRRBO95718 433 aa11.29□□□□□ -0.6
RABGGTA-218ENST00000560777 PDYNP01213 254 aa11.29□□□□□ -0.6
RABGGTA-218ENST00000560777 XCR1P46094 333 aa11.29□□□□□ -0.6
RABGGTA-218ENST00000560777 EFNA3P52797 238 aa11.29□□□□□ -0.6
RABGGTA-218ENST00000560777 MAGOHP61326 146 aaKnown RBP11.29□□□□□ -0.6
RABGGTA-218ENST00000560777 SKP1P63208 163 aa11.29□□□□□ -0.6
RABGGTA-218ENST00000560777 IFT88Q13099 833 aa11.29□□□□□ -0.6
RABGGTA-218ENST00000560777 CUL3Q13618 768 aa11.29□□□□□ -0.6
RABGGTA-218ENST00000560777 SGO1Q5FBB7 561 aa11.29□□□□□ -0.6
RABGGTA-218ENST00000560777 TRIM40Q6P9F5 258 aa11.29□□□□□ -0.6
RABGGTA-218ENST00000560777 SRFBP1Q8NEF9 429 aaKnown RBP11.29□□□□□ -0.6
RABGGTA-218ENST00000560777 OR6Y1Q8NGX8 325 aa11.29□□□□□ -0.6
RABGGTA-218ENST00000560777 METTL6Q8TCB7 284 aa11.29□□□□□ -0.6
RABGGTA-218ENST00000560777 AGAP11Q8TF27 550 aa11.29□□□□□ -0.6
RABGGTA-218ENST00000560777 ARL8AQ96BM9 186 aa11.29□□□□□ -0.6
RABGGTA-218ENST00000560777 PEX11GQ96HA9 241 aa11.29□□□□□ -0.6
RABGGTA-218ENST00000560777 CNDP1Q96KN2 507 aa11.29□□□□□ -0.6
RABGGTA-218ENST00000560777 KCNC2Q96PR1 638 aa11.29□□□□□ -0.6
RABGGTA-218ENST00000560777 TBCDQ9BTW9 1192 aa11.29□□□□□ -0.6
RABGGTA-218ENST00000560777 ELOVL6Q9H5J4 265 aa11.29□□□□□ -0.6
RABGGTA-218ENST00000560777 VIPAS39Q9H9C1 493 aa11.29□□□□□ -0.6
RABGGTA-218ENST00000560777 PRM3Q9NNZ6 103 aa11.29□□□□□ -0.6
RABGGTA-218ENST00000560777 TNFRSF12AQ9NP84 129 aa11.29□□□□□ -0.6
RABGGTA-218ENST00000560777 MID1IP1Q9NPA3 183 aa11.29□□□□□ -0.6
RABGGTA-218ENST00000560777 PPT2Q9UMR5 302 aa11.29□□□□□ -0.6
RABGGTA-218ENST00000560777 SNX6Q9UNH7 406 aa11.29□□□□□ -0.6
RABGGTA-218ENST00000560777 STK38LQ9Y2H1 464 aa11.29□□□□□ -0.6
RABGGTA-218ENST00000560777 NBEAQ8NFP9 2946 aa11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 OR2W5A6NFC9 320 aa11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 IDSB3KWA1 339 aa11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 RTCAO00442 366 aaKnown RBP11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 MANBAO00462 879 aa11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 PLPP1O14494 284 aa11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 TM9SF1O15321 606 aa11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 ZWINTO95229 277 aa11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 DHRS4L1P0CG22 281 aa11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 IL10P22301 178 aa11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 MMP11P24347 488 aa11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 OTX2P32243 289 aa11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 SERPINB4P48594 390 aa11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 EMP2P54851 167 aa11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 MTTPP55157 894 aa11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 FOXA1P55317 472 aa11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 PHEXP78562 749 aa11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 TGM3Q08188 693 aa11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 ASPHQ12797 758 aa11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 TBR1Q16650 682 aa11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 DEFB109BQ30KR1 87 aa11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 TCHHL1Q5QJ38 904 aaPredicted RBP11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 C10orf62Q5T681 223 aaPredicted RBP11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 AGBL2Q5U5Z8 902 aa11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 OR4C11Q6IEV9 310 aa11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 ZNF793Q6ZN11 406 aa11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 ATG14Q6ZNE5 492 aa11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 PPP1R32Q7Z5V6 425 aa11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 NUDCD3Q8IVD9 361 aa11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 CA13Q8N1Q1 262 aa11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 ACOT4Q8N9L9 421 aa11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 SELENOMQ8WWX9 145 aa11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 THAP4Q8WY91 577 aa11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 RGMAQ96B86 450 aa11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 NACC2Q96BF6 587 aa11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 CATSPER2Q96P56 530 aa11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 KCNA7Q96RP8 456 aa11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 SERINC2Q96SA4 455 aa11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 MESP1Q9BRJ9 268 aa11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 CRB3Q9BUF7 120 aa11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 SORBS1Q9BX66 1292 aaKnown RBP11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 NPLQ9BXD5 320 aaPredicted RBP11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 SLC29A3Q9BZD2 475 aa11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 SHCBP1LQ9BZQ2 653 aa11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 SEMA3GQ9NS98 782 aa11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 C14orf105Q9NVL8 296 aa11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 KCMF1Q9P0J7 381 aa11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 C3orf18Q9UK00 162 aa11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 MKL2Q9ULH7 1088 aa11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 TIMM22Q9Y584 194 aa11.28□□□□□ -0.6
RABGGTA-218ENST00000560777 A0A088AWK7 358 aa11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 WDR91A4D1P6 747 aa11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 FAM227AF5H4B4 570 aa11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 H3BQF6 201 aa11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 SOCS6O14544 535 aa11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 BIRC5O15392 142 aa11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 B3GALT2O43825 422 aa11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 NPHS1O60500 1241 aa11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 ULK1O75385 1050 aa11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 SASH3O75995 380 aa11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 KRT6AP02538 564 aa11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 KRT6BP04259 564 aa11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 ITGB2P05107 769 aa11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 ENO1P06733 434 aaKnown RBP11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 ZNF10P21506 573 aaPredicted RBP11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 HIST1H1TP22492 207 aaPredicted RBP11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 ATP5A1P25705 553 aaKnown RBP11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 CERS1P27544 350 aa11.27□□□□□ -0.61
RABGGTA-218ENST00000560777 BSGP35613 385 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms