RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 NAGSQ8N159 534 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 PQLC1Q8N2U9 271 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 TCAIMQ8N3R3 496 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 ARL14Q8N4G2 192 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 RAB42Q8N4Z0 105 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 BANPQ8N9N5 519 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 HMGCLL1Q8TB92 370 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 RDH11Q8TC12 318 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 SLC37A2Q8TED4 501 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 ANKRD49Q8WVL7 239 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 STON2Q8WXE9 905 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 ATL1Q8WXF7 558 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 RAD51AP1Q96B01 352 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 TLCD1Q96CP7 247 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 CXorf40BQ96DE9 158 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 APOPT1Q96IL0 206 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 ATP6V1G3Q96LB4 118 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 CCDC138Q96M89 665 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 C12orf66Q96MD2 445 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 GPR78Q96P69 363 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 SMC6Q96SB8 1091 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 MRPL57Q9BQC6 102 aaKnown RBP5.54□□□□□ -1.52
SCAF11-213ENST00000550629 H2AFJQ9BTM1 129 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 ADI1Q9BV57 179 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 TWSG1Q9GZX9 223 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 MRPL46Q9H2W6 279 aaKnown RBP5.54□□□□□ -1.52
SCAF11-213ENST00000550629 LDAHQ9H6V9 325 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 RDH14Q9HBH5 336 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 TMBIM4Q9HC24 238 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 MED4Q9NPJ6 270 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 AKIP1Q9NQ31 210 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 FSCN3Q9NQT6 498 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 IMP3Q9NV31 184 aaKnown RBP5.54□□□□□ -1.52
SCAF11-213ENST00000550629 OR6C2Q9NZP2 312 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 SPATA7Q9P0W8 599 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 ZNF624Q9P2J8 865 aaPredicted RBP5.54□□□□□ -1.52
SCAF11-213ENST00000550629 MCM8Q9UJA3 840 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 GRID1Q9ULK0 1009 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 PSMD13Q9UNM6 376 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 ASF1AQ9Y294 204 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 OARD1Q9Y530 152 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 COL5A1P20908 1838 aaPredicted RBP5.53□□□□□ -1.52
SCAF11-213ENST00000550629 DOCK9Q9BZ29 2069 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 A0A1W2PPM1 405 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 OR52A4PA6NMU1 304 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 C4orf47A7E2U8 309 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 RHPN2P1A8MT19 583 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 ARHGEF33A8MVX0 844 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 COPEO14579 308 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 TM9SF1O15321 606 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 PRPF4O43172 522 aaKnown RBP eCLIP5.53□□□□□ -1.52
SCAF11-213ENST00000550629 TYROBPO43914 113 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 CBFA2T3O75081 653 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 ERGP11308 486 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 CKMT2P17540 419 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 TFEBP19484 476 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 CCND1P24385 295 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 ACP1P24666 158 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 GGT5P36269 586 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 RAB28P51157 221 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 CHN2P52757 468 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 NAA20P61599 178 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 DLG1Q12959 904 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 GPS2Q13227 327 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 BIRC2Q13490 618 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 GPR18Q14330 331 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 CSHL1Q14406 222 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 TSNQ15631 228 aaKnown RBP5.53□□□□□ -1.52
SCAF11-213ENST00000550629 CYP2A13Q16696 494 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 KRTAP15-1Q3LI76 137 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 CCDC153Q494R4 210 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 HSP90B2PQ58FF3 399 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.53□□□□□ -1.52
SCAF11-213ENST00000550629 NAPRTQ6XQN6 538 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 TMEM26Q6ZUK4 368 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 FRA10AC1Q70Z53 315 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 GLRX5Q86SX6 157 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 PIP4P1Q86T03 277 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 EXOC3L1Q86VI1 746 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 EID2Q8N6I1 236 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 PDPRQ8NCN5 879 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 OR5AR1Q8NGP9 310 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 OR9A1PQ8NGU1 263 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 OR2I1PQ8NGU4 316 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 KCTD4Q8WVF5 259 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 LCN9Q8WX39 176 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 SLC22A18Q96BI1 424 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 FBXL8Q96CD0 374 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 NXNL1Q96CM4 212 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 CCDC126Q96EE4 140 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 APOLD1Q96LR9 279 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 CAMK1GQ96NX5 476 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 NEU1Q99519 415 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 RAB33BQ9H082 229 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 IQCGQ9H095 443 aaKnown RBP5.53□□□□□ -1.52
SCAF11-213ENST00000550629 PCBD2Q9H0N5 130 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 CENPHQ9H3R5 247 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 CNOT10Q9H9A5 744 aaKnown RBP5.53□□□□□ -1.52
SCAF11-213ENST00000550629 ARL15Q9NXU5 204 aa5.53□□□□□ -1.52
SCAF11-213ENST00000550629 NUDT4Q9NZJ9 180 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms